Large datasets of neural responses to 140 sounds throughout the auditory hierarchy in the awake C57Bl6 mouse.

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Sophie Bagur f8f11f3bb9 Mise à jour de 'LICENSE'		1 gadu atpakaļ
Code	9b50cf26d2 Transférer les fichiers vers 'Code/Utilities'	1 gadu atpakaļ
Data	d1616bae52 Transférer les fichiers vers 'Data'	1 gadu atpakaļ
LICENSE	f8f11f3bb9 Mise à jour de 'LICENSE'	1 gadu atpakaļ
README.md	5a88ed00e7 Mise à jour de 'README.md'	1 gadu atpakaļ
datacite.yml	bdf7ac0709 Mise à jour de 'datacite.yml'	1 gadu atpakaļ

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Here we provide a large dataset of neuronal responses in the mouse auditory system to a range of simple sounds. This data is initially published in the paper Bagur, Lebourg et al

**The "Data" folder contains **

Data_XX.mat : one file with the responses all ROIs/units to all 140 sounds for each area
Clusters_XX.mat : one file with the responses of the clustered ROIS from calcium imaging data go all 140 sounds
AnatInfo_AC/ICE.mat : localisation of each ROI from AC and ICE data
Correlation_Decoding.mat : the results of core analysis from the paper, to accelerate plotting using the "BasicCorrelationDecodingAnalysis.mlx" code

**The "Codes" folder contains ** matlab code showing how to access the data and illustrating how it is organized as well as code to perform basic population level analysis from Bagur, Lebourg et al, illustrating how to calculate noise-free correlation between popultion vectors

datacite.yml
Title	Emergence of a time-independent population code in auditory cortex enables sound categorization and discrimination learning
Authors	Bagur,Sophie;Institut Pasteur, Université Paris-Cité, INSERM, Institut de l’Audition, 63 rue de Charenton, F-75012 Paris, France;ORCID:0000-0002-4375-1838 Bourg,Jacques;Institut Pasteur, Université Paris-Cité, INSERM, Institut de l’Audition, 63 rue de Charenton, F-75012 Paris, France;ORCID:0000-0002-8749-3324 Kempf,Alexandre;Institut Pasteur, Université Paris-Cité, INSERM, Institut de l’Audition, 63 rue de Charenton, F-75012 Paris, France Tarpin,Thibault;Institut Pasteur, Université Paris-Cité, INSERM, Institut de l’Audition, 63 rue de Charenton, F-75012 Paris, France Bergaoui,Khalil;Institut Pasteur, Université Paris-Cité, INSERM, Institut de l’Audition, 63 rue de Charenton, F-75012 Paris, France Guo,Yin;Institut Pasteur, Université Paris-Cité, INSERM, Institut de l’Audition, 63 rue de Charenton, F-75012 Paris, France Ceballo,Sebastian;Institut Pasteur, Université Paris-Cité, INSERM, Institut de l’Audition, 63 rue de Charenton, F-75012 Paris, France;ORCID:0000-0001-7710-421X Schwenkgrub,Joanna;Institut Pasteur, Université Paris-Cité, INSERM, Institut de l’Audition, 63 rue de Charenton, F-75012 Paris, France;ORCID:0000-0002-9695-9050 Puel,Jean-Luc;Institut des Neurosciences de Montpellier, Univ Montpellier, INSERM, Montpellier, France;ORCID:0000-0002-3772-5190 Bourien,Jérôme;Institut des Neurosciences de Montpellier, Univ Montpellier, INSERM, Montpellier, France;ORCID:0000-0001-5860-5772 Bathellier,Brice;Institut Pasteur, Université Paris-Cité, INSERM, Institut de l’Audition, 63 rue de Charenton, F-75012 Paris, France;ORCID:0000-0001-9211-1960
Description	Large datasets of neural responses to 140 sounds throughout the auditory hierarchy in the awake C57Bl6 mouse. Data includes : 2photon calcium imaging data from auditory cortex, 2photon calcium imaging data of auditory thalamus boutons in auditory cortex, 2photon calcium imaging data of dorsal inferior colliculus, electrophysiological recodings of single units from central inferior colliculus, electrophysiological recodings of single units from auditory thalamus, simulated responses of auditory nerve fibres. The code presents noise-corrected analysis methods of neural population representations of sounds
License	CC-BY-NC (https://creativecommons.org/licenses/by-nc/4.0/)
References	Emergence of a time-independent population code in auditory cortex enables sound categorization and discrimination learning.S. Bagur, J. Bourg, A. Kempf, T. Tarpin, K. Bergaoui, Y. Guo, S. Ceballo, J. Schwenkgrub, J.L. Puel, J. Bourien, B. Bathellier [doi:tba] (IsSupplementTo)
Funding	Fondation pour l’Audition, FPA IDA02 and APA 2016-03 European Research Council, ERC CoG 770841 DEEPEN Fondation pour la Recherche Médicale SPF202005011970 European Union’s Horizon 2020 research and innovation programme under grant agreement No 964568, project Hearlight We acknowledge the support of the Fondation pour l’Audition to the Institut de l’Audition.
Keywords	Neuroscience Auditory system Calcium imaging Electrophysiology Neural population coding Noise corrected metrics
Resource Type	Dataset

README.md

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