#10 Add Lightning Pose example data

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cbaker9 6 ヶ月 前 に 8 件のコミットが CatalystNeuro/add_lightning_pose_data から CatalystNeuro/master にマージされました
Szonja Weigl6 ヶ月 前 にコメントしました

The directory named "outputs" contains the pose estimation data after running Lightning Pose pose estimation algorithm on the example data provided in their own GitHub repo on 2023-11-09.

The example data is located here: https://github.com/danbider/lightning-pose/tree/main/data/mirror-mouse-example

The output was generated from this notebook

Example directory structure

/outputs/YYYY-MM-DD/HH-MM-SS/
  └── video_preds/
      ├── labeled_videos/
      ├── test_vid.csv
      ├── test_vid_pca_multiview_error.csv
      ├── test_vid_pca_singleview_error.csv
      └── test_vid_temporal_norm.csv
  • video_preds/: contains the predictions and metrics from videos.
  • video_preds/labeled_videos/: the labeled mp4 video
  • video_preds/test_vid.mp4: the original video
  • video_preds/test_vid.csv: the predictions on labeled data (x, y coordinates and confidence)
  • video_preds/test_vid_pca_multiview_error.csv: the pca multiview reprojection error between predictions and labeled keypoints
  • video_preds/test_vid_pca_singleview_error.csv: pca singleview reprojection error between predictions and labeled keypoints
  • video_preds/test_vid_temporal_norm.csv: the temporal norm between predictions and labeled key points
The directory named "outputs" contains the pose estimation data after running [Lightning Pose]( https://doi.org/10.1101/2023.04.28.538703) pose estimation algorithm on the example data provided in their own [GitHub repo](https://github.com/danbider/lightning-pose) on 2023-11-09. The example data is located here: https://github.com/danbider/lightning-pose/tree/main/data/mirror-mouse-example The output was generated from this [notebook](https://colab.research.google.com/github/danbider/lightning-pose/blob/main/scripts/litpose_training_demo.ipynb) Example directory structure ``` /outputs/YYYY-MM-DD/HH-MM-SS/ └── video_preds/ ├── labeled_videos/ ├── test_vid.csv ├── test_vid_pca_multiview_error.csv ├── test_vid_pca_singleview_error.csv └── test_vid_temporal_norm.csv ``` * `video_preds/`: contains the predictions and metrics from videos. * `video_preds/labeled_videos/`: the labeled mp4 video * `video_preds/test_vid.mp4`: the original video * `video_preds/test_vid.csv`: the predictions on labeled data (x, y coordinates and confidence) * `video_preds/test_vid_pca_multiview_error.csv`: the pca multiview reprojection error between predictions and labeled keypoints * `video_preds/test_vid_pca_singleview_error.csv`: pca singleview reprojection error between predictions and labeled keypoints * `video_preds/test_vid_temporal_norm.csv`: the temporal norm between predictions and labeled key points
cbaker9 6 ヶ月 前 に閉じられました
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