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- [environment]
- cpu_count = 36
- exec_env = "posix"
- free_mem = 29.9
- freesurfer_home = "/opt/freesurfer"
- overcommit_policy = "heuristic"
- overcommit_limit = "50%"
- nipype_version = "1.8.7.dev0"
- synthstrip_path = "PosixPath('/opt/freesurfer/models/synthstrip.1.pt')"
- templateflow_version = "24.2.0.dev49+gb1f2eb2a.d20240413"
- total_memory = 62.51573181152344
- version = "24.0.0"
- [execution]
- ants_float = false
- bids_dir = "/data/datasets/HBN"
- bids_dir_datalad = true
- bids_database_dir = "/data/datasets/HBN/.bids-index"
- bids_database_wipe = false
- cwd = "/home/oesteban/tmp/mriqc-hbn"
- datalad_get = true
- debug = false
- dry_run = false
- dsname = "HBN"
- float32 = true
- layout = "BIDS Layout: /data/datasets/HBN"
- log_dir = "/data/derivatives/HBN/mriqc-24.0.0/logs"
- log_level = 15
- modalities = [ "dwi",]
- no_sub = true
- notrack = true
- output_dir = "/data/derivatives/HBN/mriqc-24.0.0"
- participant_label = [ "NDARAW179AYF", "NDARCU417HRA", "NDARCU891YET", "NDARCV944JA6", "NDARDH086ZKK", "NDARDT181RP4", "NDARED628HMQ", "NDAREM565ADW", "NDARGM421YWQ", "NDARJB366HYJ", "NDARKX528PH3", "NDARMV822KWR", "NDARPK237YHD", "NDARPX155RF3", "NDARRC016UZE", "NDARRX897XV1", "NDARWB511AZL", "NDARWR678HLF", "NDARWY718TY7", "NDARXG736VP9", "NDARYJ536MCR", "NDARYZ909VND", "NDARZD415ZZ1", "NDARZW662UK6", "NDARZY101JNB",]
- pdb = false
- reports_only = false
- resource_monitor = false
- run_uuid = "20240417-143813_c66192a6-c6ec-4dfa-86ce-3d10173c7add"
- templateflow_home = "/home/oesteban/.cache/templateflow"
- upload_strict = false
- verbose_reports = true
- webapi_url = "https://mriqc.nimh.nih.gov:443/api/v1"
- work_dir = "/home/oesteban/tmp/mriqc-hbn/mriqc-work"
- write_graph = false
- [workflow]
- analysis_level = [ "participant",]
- biggest_file_gb = 1
- deoblique = false
- despike = false
- fd_thres = 0.2
- fd_radius = 50
- fft_spikes_detector = false
- min_len_dwi = 17
- min_len_bold = 5
- species = "human"
- template_id = "MNI152NLin2009cAsym"
- [nipype]
- crashfile_format = "txt"
- get_linked_libs = false
- local_hash_check = true
- nprocs = 24
- omp_nthreads = 10
- plugin = "MultiProc"
- remove_node_directories = false
- resource_monitor = false
- stop_on_first_crash = true
- [settings]
- file_path = "/data/derivatives/HBN/mriqc-24.0.0/logs/config-20240417-143813_c66192a6-c6ec-4dfa-86ce-3d10173c7add.toml"
- start_time = 1713357493.5243251
- [execution.bids_filters]
- [workflow.inputs]
- dwi = [ "/data/datasets/HBN/sub-NDARAW179AYF/ses-HBNsiteRU/dwi/sub-NDARAW179AYF_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARCU891YET/ses-HBNsiteCBIC/dwi/sub-NDARCU891YET_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARCV944JA6/ses-HBNsiteRU/dwi/sub-NDARCV944JA6_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARDH086ZKK/ses-HBNsiteCBIC/dwi/sub-NDARDH086ZKK_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARDT181RP4/ses-HBNsiteRU/dwi/sub-NDARDT181RP4_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARED628HMQ/ses-HBNsiteRU/dwi/sub-NDARED628HMQ_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDAREM565ADW/ses-HBNsiteCBIC/dwi/sub-NDAREM565ADW_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARGM421YWQ/ses-HBNsiteCBIC/dwi/sub-NDARGM421YWQ_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARJB366HYJ/ses-HBNsiteRU/dwi/sub-NDARJB366HYJ_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARKX528PH3/ses-HBNsiteCBIC/dwi/sub-NDARKX528PH3_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARMV822KWR/ses-HBNsiteCBIC/dwi/sub-NDARMV822KWR_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARPK237YHD/ses-HBNsiteRU/dwi/sub-NDARPK237YHD_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARRX897XV1/ses-HBNsiteCBIC/dwi/sub-NDARRX897XV1_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARWR678HLF/ses-HBNsiteRU/dwi/sub-NDARWR678HLF_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARWY718TY7/ses-HBNsiteCBIC/dwi/sub-NDARWY718TY7_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARYZ909VND/ses-HBNsiteRU/dwi/sub-NDARYZ909VND_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARZY101JNB/ses-HBNsiteCBIC/dwi/sub-NDARZY101JNB_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz",]
- [nipype.plugin_args]
- maxtasksperchild = 1
- raise_insufficient = false
- n_procs = 24
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