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- [environment]
- cpu_count = 36
- exec_env = "posix"
- free_mem = 16.5
- freesurfer_home = "/opt/freesurfer"
- overcommit_policy = "heuristic"
- overcommit_limit = "50%"
- nipype_version = "1.8.7.dev0"
- synthstrip_path = "PosixPath('/opt/freesurfer/models/synthstrip.1.pt')"
- templateflow_version = "24.2.0.dev49+gb1f2eb2a.d20240413"
- total_memory = 62.51573181152344
- version = "24.0.0"
- [execution]
- ants_float = false
- bids_dir = "/data/datasets/HBN"
- bids_dir_datalad = true
- bids_database_dir = "/data/datasets/HBN/.bids-index"
- bids_database_wipe = false
- cwd = "/home/oesteban/tmp/mriqc-hbn"
- datalad_get = true
- debug = false
- dry_run = false
- dsname = "HBN"
- float32 = true
- layout = "BIDS Layout: /data/datasets/HBN"
- log_dir = "/data/derivatives/HBN/mriqc-24.0.0/logs"
- log_level = 15
- modalities = [ "dwi",]
- no_sub = true
- notrack = true
- output_dir = "/data/derivatives/HBN/mriqc-24.0.0"
- participant_label = [ "NDARAN262WK6", "NDARBB901UD2", "NDARBT607PZL", "NDARCG037CX4", "NDARDF374LGN", "NDARGK608LJ8", "NDARHD017XEU", "NDARHG188YE9", "NDARJM296MDW", "NDARKF363RN1", "NDARLJ970DEY", "NDARLM713ZAM", "NDARMB945WN7", "NDARML142BEK", "NDARMZ687XRR", "NDARNE511XHU", "NDARNP423EJQ", "NDARRE445RHR", "NDARRF059RMB", "NDARRU720LG4", "NDARUB100PP9", "NDARUB231LHN", "NDARXK303DDB", "NDARXN764AC7", "NDARXV209WYA",]
- pdb = false
- reports_only = false
- resource_monitor = false
- run_uuid = "20240418-052444_cf4c7700-4748-4b57-b933-bfe9c3fafb2a"
- templateflow_home = "/home/oesteban/.cache/templateflow"
- upload_strict = false
- verbose_reports = true
- webapi_url = "https://mriqc.nimh.nih.gov:443/api/v1"
- work_dir = "/home/oesteban/tmp/mriqc-hbn/mriqc-work"
- write_graph = false
- [workflow]
- analysis_level = [ "participant",]
- biggest_file_gb = 1
- deoblique = false
- despike = false
- fd_thres = 0.2
- fd_radius = 50
- fft_spikes_detector = false
- min_len_dwi = 17
- min_len_bold = 5
- species = "human"
- template_id = "MNI152NLin2009cAsym"
- [nipype]
- crashfile_format = "txt"
- get_linked_libs = false
- local_hash_check = true
- nprocs = 24
- omp_nthreads = 10
- plugin = "MultiProc"
- remove_node_directories = false
- resource_monitor = false
- stop_on_first_crash = true
- [settings]
- file_path = "/data/derivatives/HBN/mriqc-24.0.0/logs/config-20240418-052444_cf4c7700-4748-4b57-b933-bfe9c3fafb2a.toml"
- start_time = 1713410684.3982167
- [execution.bids_filters]
- [workflow.inputs]
- dwi = [ "/data/datasets/HBN/sub-NDARAN262WK6/ses-HBNsiteRU/dwi/sub-NDARAN262WK6_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARBT607PZL/ses-HBNsiteRU/dwi/sub-NDARBT607PZL_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARCG037CX4/ses-HBNsiteRU/dwi/sub-NDARCG037CX4_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARDF374LGN/ses-HBNsiteCBIC/dwi/sub-NDARDF374LGN_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARHD017XEU/ses-HBNsiteCBIC/dwi/sub-NDARHD017XEU_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARHG188YE9/ses-HBNsiteCBIC/dwi/sub-NDARHG188YE9_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARJM296MDW/ses-HBNsiteRU/dwi/sub-NDARJM296MDW_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARKF363RN1/ses-HBNsiteRU/dwi/sub-NDARKF363RN1_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARLJ970DEY/ses-HBNsiteCBIC/dwi/sub-NDARLJ970DEY_ses-HBNsiteCBIC_acq-64dirVARIANTObliquity_dwi.nii.gz", "/data/datasets/HBN/sub-NDARLM713ZAM/ses-HBNsiteRU/dwi/sub-NDARLM713ZAM_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARMB945WN7/ses-HBNsiteCUNY/dwi/sub-NDARMB945WN7_ses-HBNsiteCUNY_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARML142BEK/ses-HBNsiteSI/dwi/sub-NDARML142BEK_ses-HBNsiteSI_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARMZ687XRR/ses-HBNsiteRU/dwi/sub-NDARMZ687XRR_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARNE511XHU/ses-HBNsiteSI/dwi/sub-NDARNE511XHU_ses-HBNsiteSI_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARNP423EJQ/ses-HBNsiteRU/dwi/sub-NDARNP423EJQ_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARRE445RHR/ses-HBNsiteCBIC/dwi/sub-NDARRE445RHR_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARRF059RMB/ses-HBNsiteCBIC/dwi/sub-NDARRF059RMB_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARRU720LG4/ses-HBNsiteRU/dwi/sub-NDARRU720LG4_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARUB231LHN/ses-HBNsiteRU/dwi/sub-NDARUB231LHN_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARXK303DDB/ses-HBNsiteRU/dwi/sub-NDARXK303DDB_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARXN764AC7/ses-HBNsiteRU/dwi/sub-NDARXN764AC7_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARXV209WYA/ses-HBNsiteRU/dwi/sub-NDARXV209WYA_ses-HBNsiteRU_acq-64dir_dwi.nii.gz",]
- [nipype.plugin_args]
- maxtasksperchild = 1
- raise_insufficient = false
- n_procs = 24
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