hbn-mriqc/logs/config-20240417-185231_9b30b313-2eec-4ddc-a3dd-708d6c7f06a1.toml

[environment]
cpu_count = 36
exec_env = "posix"
free_mem = 2.9
freesurfer_home = "/opt/freesurfer"
overcommit_policy = "heuristic"
overcommit_limit = "50%"
nipype_version = "1.8.7.dev0"
synthstrip_path = "PosixPath('/opt/freesurfer/models/synthstrip.1.pt')"
templateflow_version = "24.2.0.dev49+gb1f2eb2a.d20240413"
total_memory = 62.51573181152344
version = "24.0.0"

[execution]
ants_float = false
bids_dir = "/data/datasets/HBN"
bids_dir_datalad = true
bids_database_dir = "/data/datasets/HBN/.bids-index"
bids_database_wipe = false
cwd = "/home/oesteban/tmp/mriqc-hbn"
datalad_get = true
debug = false
dry_run = false
dsname = "HBN"
float32 = true
layout = "BIDS Layout: /data/datasets/HBN"
log_dir = "/data/derivatives/HBN/mriqc-24.0.0/logs"
log_level = 15
modalities = [ "dwi",]
no_sub = true
notrack = true
output_dir = "/data/derivatives/HBN/mriqc-24.0.0"
participant_label = [ "NDARCG258NEF", "NDARCP642KML", "NDARDX173WLD", "NDARFV061AR5", "NDARGK943RL3", "NDARGM196JMM", "NDARHZ500ZNT", "NDARJM036PVX", "NDARJR687LGX", "NDARLZ986JLL", "NDARMU053YEU", "NDARMW551YA0", "NDARNV694EMG", "NDARRP801AX1", "NDARRW680PHD", "NDARRZ993EL4", "NDARTG937LDA", "NDARUF389TXE", "NDARUW206XUG", "NDARVB819ENX", "NDARVL555VVA", "NDARVX111CNA", "NDARWG820RKE", "NDARXL023NG9", "NDARZA034RW7",]
pdb = false
reports_only = false
resource_monitor = false
run_uuid = "20240417-185231_9b30b313-2eec-4ddc-a3dd-708d6c7f06a1"
templateflow_home = "/home/oesteban/.cache/templateflow"
upload_strict = false
verbose_reports = true
webapi_url = "https://mriqc.nimh.nih.gov:443/api/v1"
work_dir = "/home/oesteban/tmp/mriqc-hbn/mriqc-work"
write_graph = false

[workflow]
analysis_level = [ "participant",]
biggest_file_gb = 1
deoblique = false
despike = false
fd_thres = 0.2
fd_radius = 50
fft_spikes_detector = false
min_len_dwi = 17
min_len_bold = 5
species = "human"
template_id = "MNI152NLin2009cAsym"

[nipype]
crashfile_format = "txt"
get_linked_libs = false
local_hash_check = true
nprocs = 24
omp_nthreads = 10
plugin = "MultiProc"
remove_node_directories = false
resource_monitor = false
stop_on_first_crash = true

[settings]
file_path = "/data/derivatives/HBN/mriqc-24.0.0/logs/config-20240417-185231_9b30b313-2eec-4ddc-a3dd-708d6c7f06a1.toml"
start_time = 1713372751.978093

[execution.bids_filters]

[workflow.inputs]
dwi = [ "/data/datasets/HBN/sub-NDARCP642KML/ses-HBNsiteCBIC/dwi/sub-NDARCP642KML_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARDX173WLD/ses-HBNsiteCUNY/dwi/sub-NDARDX173WLD_ses-HBNsiteCUNY_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARFV061AR5/ses-HBNsiteCBIC/dwi/sub-NDARFV061AR5_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARGK943RL3/ses-HBNsiteRU/dwi/sub-NDARGK943RL3_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARGM196JMM/ses-HBNsiteCBIC/dwi/sub-NDARGM196JMM_ses-HBNsiteCBIC_acq-64dirVARIANTObliquity_dwi.nii.gz", "/data/datasets/HBN/sub-NDARHZ500ZNT/ses-HBNsiteRU/dwi/sub-NDARHZ500ZNT_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARJM036PVX/ses-HBNsiteRU/dwi/sub-NDARJM036PVX_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARJR687LGX/ses-HBNsiteSI/dwi/sub-NDARJR687LGX_ses-HBNsiteSI_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARMU053YEU/ses-HBNsiteRU/dwi/sub-NDARMU053YEU_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARMW551YA0/ses-HBNsiteCBIC/dwi/sub-NDARMW551YA0_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARNV694EMG/ses-HBNsiteRU/dwi/sub-NDARNV694EMG_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARRP801AX1/ses-HBNsiteRU/dwi/sub-NDARRP801AX1_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARRW680PHD/ses-HBNsiteCBIC/dwi/sub-NDARRW680PHD_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARRZ993EL4/ses-HBNsiteCBIC/dwi/sub-NDARRZ993EL4_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARTG937LDA/ses-HBNsiteRU/dwi/sub-NDARTG937LDA_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARUW206XUG/ses-HBNsiteCBIC/dwi/sub-NDARUW206XUG_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARVB819ENX/ses-HBNsiteRU/dwi/sub-NDARVB819ENX_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARVX111CNA/ses-HBNsiteCBIC/dwi/sub-NDARVX111CNA_ses-HBNsiteCBIC_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARWG820RKE/ses-HBNsiteCBIC/dwi/sub-NDARWG820RKE_ses-HBNsiteCBIC_acq-64dirVARIANTObliquity_dwi.nii.gz", "/data/datasets/HBN/sub-NDARXL023NG9/ses-HBNsiteRU/dwi/sub-NDARXL023NG9_ses-HBNsiteRU_acq-64dir_dwi.nii.gz", "/data/datasets/HBN/sub-NDARZA034RW7/ses-HBNsiteCUNY/dwi/sub-NDARZA034RW7_ses-HBNsiteCUNY_acq-64dir_dwi.nii.gz",]

[nipype.plugin_args]
maxtasksperchild = 1
raise_insufficient = false
n_procs = 24