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[DATALAD RUNCMD] Compute SWU_4/sub-0025651/ses-1

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "6c5791d8-1803-48a1-bbaa-2b5e23b5f707",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/CORR/SWU_4/sub-0025651/ses-1/anat/sub-0025651_ses-1_run-1_T1w.nii.gz"
 ],
 "outputs": [
  "SWU_4/sub-0025651/ses-1"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^
Felix Hoffstaedter 7 months ago
parent
8dcd9a1162
commit
5acc6bc1f9
100 changed files with 99 additions and 0 deletions
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      SWU_4/sub-0025651/ses-1/label/catROIs_sub-0025651_ses-1_run-1_T1w.mat
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      SWU_4/sub-0025651/ses-1/mri/Schaefer2018_100Parcels_17Networks_order_sub-0025651_ses-1_run-1_T1w.csv
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  64. 1 0
      SWU_4/sub-0025651/ses-1/report/cat_sub-0025651_ses-1_run-1_T1w.mat
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      SWU_4/sub-0025651/ses-1/report/cat_sub-0025651_ses-1_run-1_T1w.xml
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      SWU_4/sub-0025651/ses-1/report/catlog_sub-0025651_ses-1_run-1_T1w.nii.txt
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      SWU_4/sub-0025651/ses-1/report/catreport_sub-0025651_ses-1_run-1_T1w.pdf
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      SWU_4/sub-0025651/ses-1/report/catreportj_sub-0025651_ses-1_run-1_T1w.jpg
  69. 1 0
      SWU_4/sub-0025651/ses-1/surf/lh.area.sub-0025651_ses-1_run-1_T1w
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      SWU_4/sub-0025651/ses-1/surf/lh.central.sub-0025651_ses-1_run-1_T1w.gii
  71. 1 0
      SWU_4/sub-0025651/ses-1/surf/lh.depth.sub-0025651_ses-1_run-1_T1w
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      SWU_4/sub-0025651/ses-1/surf/lh.edgemap32k.sub-0025651_ses-1_run-1_T1w.mat
  73. 1 0
      SWU_4/sub-0025651/ses-1/surf/lh.fractaldimension.sub-0025651_ses-1_run-1_T1w
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      SWU_4/sub-0025651/ses-1/surf/lh.gmv.sub-0025651_ses-1_run-1_T1w
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      SWU_4/sub-0025651/ses-1/surf/lh.gyrification.sub-0025651_ses-1_run-1_T1w
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      SWU_4/sub-0025651/ses-1/surf/lh.pbt.sub-0025651_ses-1_run-1_T1w
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      SWU_4/sub-0025651/ses-1/surf/lh.sphere.sub-0025651_ses-1_run-1_T1w.gii
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      SWU_4/sub-0025651/ses-1/surf/lh.thickness.sub-0025651_ses-1_run-1_T1w
  80. 1 0
      SWU_4/sub-0025651/ses-1/surf/lh.toroGI20mm.sub-0025651_ses-1_run-1_T1w
  81. 1 0
      SWU_4/sub-0025651/ses-1/surf/rh.area.sub-0025651_ses-1_run-1_T1w
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SWU_4/sub-0025651/ses-1/label/catROI_sub-0025651_ses-1_run-1_T1w.mat
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SWU_4/sub-0025651/ses-1/label/catROI_sub-0025651_ses-1_run-1_T1w.xml
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SWU_4/sub-0025651/ses-1/label/catROIs_sub-0025651_ses-1_run-1_T1w.mat
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SWU_4/sub-0025651/ses-1/label/catROIs_sub-0025651_ses-1_run-1_T1w.xml
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SWU_4/sub-0025651/ses-1/mri/Schaefer2018_200Parcels_17Networks_order_sub-0025651_ses-1_run-1_T1w.csv
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SWU_4/sub-0025651/ses-1/mri/Schaefer2018_200Parcels_17Networks_order_sub-0025651_ses-1_run-1_T1w.nii.gz
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SWU_4/sub-0025651/ses-1/mri/Schaefer2018_400Parcels_17Networks_order_sub-0025651_ses-1_run-1_T1w.csv
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SWU_4/sub-0025651/ses-1/mri/Schaefer2018_600Parcels_17Networks_order_sub-0025651_ses-1_run-1_T1w.csv
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SWU_4/sub-0025651/ses-1/mri/Tian_Subcortex_S2_7T_sub-0025651_ses-1_run-1_T1w.csv
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SWU_4/sub-0025651/ses-1/mri/Tian_Subcortex_S2_7T_sub-0025651_ses-1_run-1_T1w.nii.gz
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SWU_4/sub-0025651/ses-1/mri/aal3_sub-0025651_ses-1_run-1_T1w.csv
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