[DATALAD RUNCMD] Compute MPG_1/sub-0027450/ses-1

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "6c5791d8-1803-48a1-bbaa-2b5e23b5f707",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/CORR/MPG_1/sub-0027450/ses-1/anat/sub-0027450_ses-1_run-1_T1w.nii.gz"
 ],
 "outputs": [
  "MPG_1/sub-0027450/ses-1"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

MPG_1/sub-0027450/ses-1/label/catROI_sub-0027450_ses-1_acq-uni_run-1_T1w.mat

@@ -1 +0,0 @@
-../../../../.git/annex/objects/Fp/8x/MD5E-s61218--c4c9e7cc7e78fe69caa2c49ecbf45321.mat/MD5E-s61218--c4c9e7cc7e78fe69caa2c49ecbf45321.mat

MPG_1/sub-0027450/ses-1/label/catROI_sub-0027450_ses-1_acq-uni_run-1_T1w.xml

@@ -1 +0,0 @@
-../../../../.git/annex/objects/Z0/9W/MD5E-s189055--aa03211a585dd5fb7bc5b1f09dc3b72e.xml/MD5E-s189055--aa03211a585dd5fb7bc5b1f09dc3b72e.xml

MPG_1/sub-0027450/ses-1/label/catROI_sub-0027450_ses-1_run-1_T1w.mat

@@ -0,0 +1 @@
+../../../../.git/annex/objects/Z6/j6/MD5E-s61436--6492717d28b619897369b8ebe735371d.mat/MD5E-s61436--6492717d28b619897369b8ebe735371d.mat

MPG_1/sub-0027450/ses-1/label/catROI_sub-0027450_ses-1_run-1_T1w.xml

@@ -0,0 +1 @@
+../../../../.git/annex/objects/8z/Fx/MD5E-s189942--29cf8f716a014da418bca71e09c72cdd.xml/MD5E-s189942--29cf8f716a014da418bca71e09c72cdd.xml

MPG_1/sub-0027450/ses-1/label/catROIs_sub-0027450_ses-1_acq-uni_run-1_T1w.mat

@@ -1 +0,0 @@
-../../../../.git/annex/objects/J9/Zq/MD5E-s120228--3e9720312f5ef4fce9079fc98655cd73.mat/MD5E-s120228--3e9720312f5ef4fce9079fc98655cd73.mat

MPG_1/sub-0027450/ses-1/label/catROIs_sub-0027450_ses-1_acq-uni_run-1_T1w.xml

@@ -1 +0,0 @@
-../../../../.git/annex/objects/9g/jj/MD5E-s332201--adc3e7e9ab7bf46bb5f081fdef8a6012.xml/MD5E-s332201--adc3e7e9ab7bf46bb5f081fdef8a6012.xml

MPG_1/sub-0027450/ses-1/label/catROIs_sub-0027450_ses-1_run-1_T1w.mat

@@ -0,0 +1 @@
+../../../../.git/annex/objects/mj/XX/MD5E-s120305--204b30b45baed9525de052a15669067f.mat/MD5E-s120305--204b30b45baed9525de052a15669067f.mat

MPG_1/sub-0027450/ses-1/label/catROIs_sub-0027450_ses-1_run-1_T1w.xml

@@ -0,0 +1 @@
+../../../../.git/annex/objects/Gf/fv/MD5E-s332134--70f34ca31a6c0177b9374fa833c084d2.xml/MD5E-s332134--70f34ca31a6c0177b9374fa833c084d2.xml

MPG_1/sub-0027450/ses-1/mri/Schaefer2018_100Parcels_17Networks_order_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/J2/ZP/MD5E-s335704--7de3e9b9ff5ddf43e58375f5783e920b.nii.gz/MD5E-s335704--7de3e9b9ff5ddf43e58375f5783e920b.nii.gz

MPG_1/sub-0027450/ses-1/mri/Schaefer2018_100Parcels_17Networks_order_sub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/02/64/MD5E-s312395--410b5a1d27aad271be85202213fdd85a.nii.gz/MD5E-s312395--410b5a1d27aad271be85202213fdd85a.nii.gz

MPG_1/sub-0027450/ses-1/mri/Schaefer2018_200Parcels_17Networks_order_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/4w/Fq/MD5E-s374922--b49db7bd2fc638871c51539fd56694b8.nii.gz/MD5E-s374922--b49db7bd2fc638871c51539fd56694b8.nii.gz

MPG_1/sub-0027450/ses-1/mri/Schaefer2018_200Parcels_17Networks_order_sub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/X9/3M/MD5E-s349422--39c70fa1c359767097e343fafef25c49.nii.gz/MD5E-s349422--39c70fa1c359767097e343fafef25c49.nii.gz

MPG_1/sub-0027450/ses-1/mri/Schaefer2018_400Parcels_17Networks_order_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/07/3q/MD5E-s487069--e6f6f30011a404ce4382aa72b44aace6.nii.gz/MD5E-s487069--e6f6f30011a404ce4382aa72b44aace6.nii.gz

MPG_1/sub-0027450/ses-1/mri/Schaefer2018_400Parcels_17Networks_order_sub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/X4/30/MD5E-s453593--b16d157fc384e3ff660e84f162664bcd.nii.gz/MD5E-s453593--b16d157fc384e3ff660e84f162664bcd.nii.gz

MPG_1/sub-0027450/ses-1/mri/Schaefer2018_600Parcels_17Networks_order_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/ff/KK/MD5E-s540704--bbf5cf917d2cc93bf71c6bc197bd3639.nii.gz/MD5E-s540704--bbf5cf917d2cc93bf71c6bc197bd3639.nii.gz

MPG_1/sub-0027450/ses-1/mri/Schaefer2018_600Parcels_17Networks_order_sub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/4F/Q4/MD5E-s502869--c44b31ece742c7e395a46f3a5ca1b4b0.nii.gz/MD5E-s502869--c44b31ece742c7e395a46f3a5ca1b4b0.nii.gz

MPG_1/sub-0027450/ses-1/mri/Tian_Subcortex_S2_7T_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/Zx/vp/MD5E-s48155--06ff637fe222791f13c2e5407cbc6d2b.nii.gz/MD5E-s48155--06ff637fe222791f13c2e5407cbc6d2b.nii.gz

MPG_1/sub-0027450/ses-1/mri/Tian_Subcortex_S2_7T_sub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/2w/zM/MD5E-s48978--ee10106969a82f90c99bffe97ef81df8.nii.gz/MD5E-s48978--ee10106969a82f90c99bffe97ef81df8.nii.gz

MPG_1/sub-0027450/ses-1/mri/aal3_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/Vp/0q/MD5E-s374693--ccb5b103ae08ac49342c779162ad9e4e.nii.gz/MD5E-s374693--ccb5b103ae08ac49342c779162ad9e4e.nii.gz

MPG_1/sub-0027450/ses-1/mri/aal3_sub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/Km/9M/MD5E-s349511--9f427231bc3645fca338bc7cc0d5b035.nii.gz/MD5E-s349511--9f427231bc3645fca338bc7cc0d5b035.nii.gz

MPG_1/sub-0027450/ses-1/mri/anatomy3_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/W9/gz/MD5E-s276472--fb254f41c509624ea3787e66de04051c.nii.gz/MD5E-s276472--fb254f41c509624ea3787e66de04051c.nii.gz

MPG_1/sub-0027450/ses-1/mri/anatomy3_sub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/1F/f8/MD5E-s258925--3b00d36dac368f34b0082868ef1f1475.nii.gz/MD5E-s258925--3b00d36dac368f34b0082868ef1f1475.nii.gz

MPG_1/sub-0027450/ses-1/mri/anon_misub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/78/W3/MD5E-s27209505--c07322a281fe9cc972ae6652b1f9e114.nii.gz/MD5E-s27209505--c07322a281fe9cc972ae6652b1f9e114.nii.gz

MPG_1/sub-0027450/ses-1/mri/anon_misub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/6P/Qp/MD5E-s27916185--23eeddbbd1d65dc1cd83f1bd1870d9a5.nii.gz/MD5E-s27916185--23eeddbbd1d65dc1cd83f1bd1870d9a5.nii.gz

MPG_1/sub-0027450/ses-1/mri/anon_msub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/Zw/8Q/MD5E-s28085736--9e61df3989cf12bf58e7adc482cd172a.nii.gz/MD5E-s28085736--9e61df3989cf12bf58e7adc482cd172a.nii.gz

MPG_1/sub-0027450/ses-1/mri/anon_msub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/pJ/PK/MD5E-s27919270--25a7930a599a4e651884156dc953ea9e.nii.gz/MD5E-s27919270--25a7930a599a4e651884156dc953ea9e.nii.gz

MPG_1/sub-0027450/ses-1/mri/cat_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/0V/87/MD5E-s144138--76049499dfc54369652c8071a2570cb1.nii.gz/MD5E-s144138--76049499dfc54369652c8071a2570cb1.nii.gz

MPG_1/sub-0027450/ses-1/mri/cat_sub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/Xx/kp/MD5E-s132897--817e777a600b03e87ad3cea4143e5b2a.nii.gz/MD5E-s132897--817e777a600b03e87ad3cea4143e5b2a.nii.gz

MPG_1/sub-0027450/ses-1/mri/cobra_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/vw/2j/MD5E-s100019--f93783d64f6a7ec3f7e55f66e9f2bf1c.nii.gz/MD5E-s100019--f93783d64f6a7ec3f7e55f66e9f2bf1c.nii.gz

MPG_1/sub-0027450/ses-1/mri/cobra_sub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
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MPG_1/sub-0027450/ses-1/mri/hammers_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/Mq/2K/MD5E-s291179--2859491466697edebb3a46f246d04124.nii.gz/MD5E-s291179--2859491466697edebb3a46f246d04124.nii.gz

MPG_1/sub-0027450/ses-1/mri/hammers_sub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
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MPG_1/sub-0027450/ses-1/mri/ibsr_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
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MPG_1/sub-0027450/ses-1/mri/ibsr_sub-0027450_ses-1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
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MPG_1/sub-0027450/ses-1/mri/it_sub-0027450_ses-1_acq-uni_run-1_T1w_affine_reorient.mat

@@ -1 +0,0 @@
-../../../../.git/annex/objects/Ff/zP/MD5E-s282--613e20947be91d1d0e68b003ad2907f9.mat/MD5E-s282--613e20947be91d1d0e68b003ad2907f9.mat

MPG_1/sub-0027450/ses-1/mri/it_sub-0027450_ses-1_acq-uni_run-1_T1w_rigid_reorient.mat

@@ -1 +0,0 @@
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MPG_1/sub-0027450/ses-1/mri/it_sub-0027450_ses-1_run-1_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../../.git/annex/objects/WV/Vm/MD5E-s282--3528a072b5b1470467107c1a70a28191.mat/MD5E-s282--3528a072b5b1470467107c1a70a28191.mat

MPG_1/sub-0027450/ses-1/mri/it_sub-0027450_ses-1_run-1_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
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MPG_1/sub-0027450/ses-1/mri/iy_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
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MPG_1/sub-0027450/ses-1/mri/iy_sub-0027450_ses-1_run-1_T1w.nii.gz

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MPG_1/sub-0027450/ses-1/mri/julichbrain_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
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MPG_1/sub-0027450/ses-1/mri/julichbrain_sub-0027450_ses-1_run-1_T1w.nii.gz

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MPG_1/sub-0027450/ses-1/mri/lpba40_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
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MPG_1/sub-0027450/ses-1/mri/lpba40_sub-0027450_ses-1_run-1_T1w.nii.gz

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MPG_1/sub-0027450/ses-1/mri/m0wp1sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

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MPG_1/sub-0027450/ses-1/mri/m0wp1sub-0027450_ses-1_run-1_T1w.nii.gz

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MPG_1/sub-0027450/ses-1/mri/m0wp2sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

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MPG_1/sub-0027450/ses-1/mri/m0wp2sub-0027450_ses-1_run-1_T1w.nii.gz

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MPG_1/sub-0027450/ses-1/mri/m0wp3sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

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MPG_1/sub-0027450/ses-1/mri/m0wp3sub-0027450_ses-1_run-1_T1w.nii.gz

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MPG_1/sub-0027450/ses-1/mri/mori_sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

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MPG_1/sub-0027450/ses-1/mri/mori_sub-0027450_ses-1_run-1_T1w.nii.gz

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MPG_1/sub-0027450/ses-1/mri/mwp1sub-0027450_ses-1_acq-uni_run-1_T1w.nii.gz

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MPG_1/sub-0027450/ses-1/mri/mwp1sub-0027450_ses-1_run-1_T1w.nii.gz

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