[DATALAD RUNCMD] Compute MPG_1/sub-0027438/ses-1

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "6c5791d8-1803-48a1-bbaa-2b5e23b5f707",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/CORR/MPG_1/sub-0027438/ses-1/anat/sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz"
 ],
 "outputs": [
  "MPG_1/sub-0027438/ses-1"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

MPG_1/sub-0027438/ses-1/label/catROI_sub-0027438_ses-1_acq-inv1_run-1_T1w.mat

@@ -0,0 +1 @@
+../../../../.git/annex/objects/Qq/kj/MD5E-s61483--855b7d2fc3c2316b6155be6b57daf994.mat/MD5E-s61483--855b7d2fc3c2316b6155be6b57daf994.mat

MPG_1/sub-0027438/ses-1/label/catROI_sub-0027438_ses-1_acq-inv1_run-1_T1w.xml

@@ -0,0 +1 @@
+../../../../.git/annex/objects/gF/6G/MD5E-s189965--5afab460260d5f0152b3f07921a2a6f2.xml/MD5E-s189965--5afab460260d5f0152b3f07921a2a6f2.xml

MPG_1/sub-0027438/ses-1/label/catROI_sub-0027438_ses-1_acq-uni_run-1_T1w.mat

@@ -1 +0,0 @@
-../../../../.git/annex/objects/02/PJ/MD5E-s61282--9b572f2360e872d4bf0c2aba9d068227.mat/MD5E-s61282--9b572f2360e872d4bf0c2aba9d068227.mat

MPG_1/sub-0027438/ses-1/label/catROI_sub-0027438_ses-1_acq-uni_run-1_T1w.xml

@@ -1 +0,0 @@
-../../../../.git/annex/objects/qP/qz/MD5E-s188997--65d3fb59eba3620ce087e2d800dcd3de.xml/MD5E-s188997--65d3fb59eba3620ce087e2d800dcd3de.xml

MPG_1/sub-0027438/ses-1/label/catROIs_sub-0027438_ses-1_acq-inv1_run-1_T1w.mat

@@ -0,0 +1 @@
+../../../../.git/annex/objects/mM/p3/MD5E-s120503--c093e4db949c8964bbcc8a0b42412542.mat/MD5E-s120503--c093e4db949c8964bbcc8a0b42412542.mat

MPG_1/sub-0027438/ses-1/label/catROIs_sub-0027438_ses-1_acq-inv1_run-1_T1w.xml

@@ -0,0 +1 @@
+../../../../.git/annex/objects/M0/6J/MD5E-s332145--353de65d3b9784bb6dc15f089c57599c.xml/MD5E-s332145--353de65d3b9784bb6dc15f089c57599c.xml

MPG_1/sub-0027438/ses-1/label/catROIs_sub-0027438_ses-1_acq-uni_run-1_T1w.mat

@@ -1 +0,0 @@
-../../../../.git/annex/objects/3m/41/MD5E-s120332--ac1b7ca6a0bc2e708f892a941dd2b2de.mat/MD5E-s120332--ac1b7ca6a0bc2e708f892a941dd2b2de.mat

MPG_1/sub-0027438/ses-1/label/catROIs_sub-0027438_ses-1_acq-uni_run-1_T1w.xml

@@ -1 +0,0 @@
-../../../../.git/annex/objects/7Q/1P/MD5E-s332162--c426f06e57835e6f14d54c1d7dc4d0c8.xml/MD5E-s332162--c426f06e57835e6f14d54c1d7dc4d0c8.xml

MPG_1/sub-0027438/ses-1/mri/Schaefer2018_100Parcels_17Networks_order_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/Kj/0q/MD5E-s331103--3a8754efac8f3cd84f4cce299b9adbfc.nii.gz/MD5E-s331103--3a8754efac8f3cd84f4cce299b9adbfc.nii.gz

MPG_1/sub-0027438/ses-1/mri/Schaefer2018_100Parcels_17Networks_order_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/2j/Vg/MD5E-s364143--c7b101d26d8582a8814bde8c44ec3327.nii.gz/MD5E-s364143--c7b101d26d8582a8814bde8c44ec3327.nii.gz

MPG_1/sub-0027438/ses-1/mri/Schaefer2018_200Parcels_17Networks_order_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/Vz/79/MD5E-s369186--fd32b640ef69ef2a4605bd3a3aaf5167.nii.gz/MD5E-s369186--fd32b640ef69ef2a4605bd3a3aaf5167.nii.gz

MPG_1/sub-0027438/ses-1/mri/Schaefer2018_200Parcels_17Networks_order_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/xJ/0p/MD5E-s406151--5a831aebdfb436f13d7f6b4cc6620c54.nii.gz/MD5E-s406151--5a831aebdfb436f13d7f6b4cc6620c54.nii.gz

MPG_1/sub-0027438/ses-1/mri/Schaefer2018_400Parcels_17Networks_order_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/G6/K9/MD5E-s480269--d81a44ab22f93e0d75bcd728e844eefa.nii.gz/MD5E-s480269--d81a44ab22f93e0d75bcd728e844eefa.nii.gz

MPG_1/sub-0027438/ses-1/mri/Schaefer2018_400Parcels_17Networks_order_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/57/KQ/MD5E-s524864--62366ddbe5ef35bbd6e06125fded15f4.nii.gz/MD5E-s524864--62366ddbe5ef35bbd6e06125fded15f4.nii.gz

MPG_1/sub-0027438/ses-1/mri/Schaefer2018_600Parcels_17Networks_order_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/j4/wV/MD5E-s531756--c90bf6e27e04b331389320a38377d578.nii.gz/MD5E-s531756--c90bf6e27e04b331389320a38377d578.nii.gz

MPG_1/sub-0027438/ses-1/mri/Schaefer2018_600Parcels_17Networks_order_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/Jw/0M/MD5E-s581449--38189acf6f1145b2d53879474588173d.nii.gz/MD5E-s581449--38189acf6f1145b2d53879474588173d.nii.gz

MPG_1/sub-0027438/ses-1/mri/Tian_Subcortex_S2_7T_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/MQ/XM/MD5E-s51395--c67ef11f8c9853fca2e3eb875fcc82b9.nii.gz/MD5E-s51395--c67ef11f8c9853fca2e3eb875fcc82b9.nii.gz

MPG_1/sub-0027438/ses-1/mri/Tian_Subcortex_S2_7T_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/33/K5/MD5E-s50199--d7e479a5d81ef39abe549281bfbd230b.nii.gz/MD5E-s50199--d7e479a5d81ef39abe549281bfbd230b.nii.gz

MPG_1/sub-0027438/ses-1/mri/aal3_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/mm/qP/MD5E-s373076--2b68b523a853116e8f65a0bf1979ccb9.nii.gz/MD5E-s373076--2b68b523a853116e8f65a0bf1979ccb9.nii.gz

MPG_1/sub-0027438/ses-1/mri/aal3_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/FM/fw/MD5E-s405298--e5fd845c87ba52ab81afe9251d20c0eb.nii.gz/MD5E-s405298--e5fd845c87ba52ab81afe9251d20c0eb.nii.gz

MPG_1/sub-0027438/ses-1/mri/anatomy3_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/P8/j9/MD5E-s273560--3786952d72aba0ce5a89bf942acf95e2.nii.gz/MD5E-s273560--3786952d72aba0ce5a89bf942acf95e2.nii.gz

MPG_1/sub-0027438/ses-1/mri/anatomy3_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/q4/Kw/MD5E-s298842--7f722589c299b9a14a86b119055c2b5f.nii.gz/MD5E-s298842--7f722589c299b9a14a86b119055c2b5f.nii.gz

MPG_1/sub-0027438/ses-1/mri/anon_misub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/3k/24/MD5E-s29861445--c062eb789dc1ac709f1dc97ca28a1834.nii.gz/MD5E-s29861445--c062eb789dc1ac709f1dc97ca28a1834.nii.gz

MPG_1/sub-0027438/ses-1/mri/anon_misub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/7m/44/MD5E-s29980806--44de0a18252db1840a3f4f8dcd9c4ba6.nii.gz/MD5E-s29980806--44de0a18252db1840a3f4f8dcd9c4ba6.nii.gz

MPG_1/sub-0027438/ses-1/mri/anon_msub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/xp/m2/MD5E-s29866784--115efd6611e88a7dc0152b2db2fdbab6.nii.gz/MD5E-s29866784--115efd6611e88a7dc0152b2db2fdbab6.nii.gz

MPG_1/sub-0027438/ses-1/mri/anon_msub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/89/WG/MD5E-s30120388--643ff8489b4a97ad3827bf34d5f0db2a.nii.gz/MD5E-s30120388--643ff8489b4a97ad3827bf34d5f0db2a.nii.gz

MPG_1/sub-0027438/ses-1/mri/cat_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/pQ/XW/MD5E-s153437--5ca20d2d29d421838f71a08c02f4bf45.nii.gz/MD5E-s153437--5ca20d2d29d421838f71a08c02f4bf45.nii.gz

MPG_1/sub-0027438/ses-1/mri/cat_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/xm/9X/MD5E-s165345--1b189e7e8b9d48da2d811e06ef70124a.nii.gz/MD5E-s165345--1b189e7e8b9d48da2d811e06ef70124a.nii.gz

MPG_1/sub-0027438/ses-1/mri/cobra_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/mP/qf/MD5E-s103634--e671037190db2098c1b4a1da99a4c472.nii.gz/MD5E-s103634--e671037190db2098c1b4a1da99a4c472.nii.gz

MPG_1/sub-0027438/ses-1/mri/cobra_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/4P/M6/MD5E-s110258--190200ba51566bbaaf5228fbc711aa63.nii.gz/MD5E-s110258--190200ba51566bbaaf5228fbc711aa63.nii.gz

MPG_1/sub-0027438/ses-1/mri/hammers_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/jG/FG/MD5E-s291425--57369f88d59c801bdc54c6f9e8854691.nii.gz/MD5E-s291425--57369f88d59c801bdc54c6f9e8854691.nii.gz

MPG_1/sub-0027438/ses-1/mri/hammers_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/88/Wg/MD5E-s315861--089bbf2851fe7ec6e8f5efa1b6e33ed0.nii.gz/MD5E-s315861--089bbf2851fe7ec6e8f5efa1b6e33ed0.nii.gz

MPG_1/sub-0027438/ses-1/mri/ibsr_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/pJ/Wf/MD5E-s307738--80bebef98c02afe7b300604c48576b98.nii.gz/MD5E-s307738--80bebef98c02afe7b300604c48576b98.nii.gz

MPG_1/sub-0027438/ses-1/mri/ibsr_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/x4/x1/MD5E-s337951--2f60b13bd30fa074265ad3d88b3a2994.nii.gz/MD5E-s337951--2f60b13bd30fa074265ad3d88b3a2994.nii.gz

MPG_1/sub-0027438/ses-1/mri/it_sub-0027438_ses-1_acq-inv1_run-1_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../../.git/annex/objects/jP/3z/MD5E-s283--77fbe2f50bb99479fc3e891a52e9777f.mat/MD5E-s283--77fbe2f50bb99479fc3e891a52e9777f.mat

MPG_1/sub-0027438/ses-1/mri/it_sub-0027438_ses-1_acq-inv1_run-1_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../../.git/annex/objects/3j/2P/MD5E-s285--df48b2495e7eca38e323eb29e8a43e28.mat/MD5E-s285--df48b2495e7eca38e323eb29e8a43e28.mat

MPG_1/sub-0027438/ses-1/mri/it_sub-0027438_ses-1_acq-uni_run-1_T1w_affine_reorient.mat

@@ -1 +0,0 @@
-../../../../.git/annex/objects/9v/9g/MD5E-s283--9f79209207ee5c5ad601fefd8d482064.mat/MD5E-s283--9f79209207ee5c5ad601fefd8d482064.mat

MPG_1/sub-0027438/ses-1/mri/it_sub-0027438_ses-1_acq-uni_run-1_T1w_rigid_reorient.mat

@@ -1 +0,0 @@
-../../../../.git/annex/objects/FW/xp/MD5E-s284--e25af9ab020a06920f16fb6c2a1e296b.mat/MD5E-s284--e25af9ab020a06920f16fb6c2a1e296b.mat

MPG_1/sub-0027438/ses-1/mri/iy_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/22/Qj/MD5E-s132025409--7ef35e92dbebba47c7ad2cf5b5668195.nii.gz/MD5E-s132025409--7ef35e92dbebba47c7ad2cf5b5668195.nii.gz

MPG_1/sub-0027438/ses-1/mri/iy_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
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MPG_1/sub-0027438/ses-1/mri/julichbrain_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/Gq/fF/MD5E-s396159--37a3a791b758104bd00a3c7f6754c099.nii.gz/MD5E-s396159--37a3a791b758104bd00a3c7f6754c099.nii.gz

MPG_1/sub-0027438/ses-1/mri/julichbrain_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
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MPG_1/sub-0027438/ses-1/mri/lpba40_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

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MPG_1/sub-0027438/ses-1/mri/lpba40_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/7m/j4/MD5E-s315686--33625461cc1bd406deba613b4e5a02c0.nii.gz/MD5E-s315686--33625461cc1bd406deba613b4e5a02c0.nii.gz

MPG_1/sub-0027438/ses-1/mri/m0wp1sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

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+../../../../.git/annex/objects/zP/Wm/MD5E-s2537655--4da763c7f5cfc772a8ee878b15ba01bd.nii.gz/MD5E-s2537655--4da763c7f5cfc772a8ee878b15ba01bd.nii.gz

MPG_1/sub-0027438/ses-1/mri/m0wp1sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
-../../../../.git/annex/objects/3m/Fx/MD5E-s2562493--2b010997a648b84ad6c241246add033e.nii.gz/MD5E-s2562493--2b010997a648b84ad6c241246add033e.nii.gz

MPG_1/sub-0027438/ses-1/mri/m0wp2sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

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MPG_1/sub-0027438/ses-1/mri/m0wp2sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
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MPG_1/sub-0027438/ses-1/mri/m0wp3sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

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MPG_1/sub-0027438/ses-1/mri/m0wp3sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

@@ -1 +0,0 @@
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MPG_1/sub-0027438/ses-1/mri/mori_sub-0027438_ses-1_acq-inv1_run-1_T1w.nii.gz

@@ -0,0 +1 @@
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MPG_1/sub-0027438/ses-1/mri/mori_sub-0027438_ses-1_acq-uni_run-1_T1w.nii.gz

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