[DATALAD RUNCMD] Compute Leuven_2/sub-0050751

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/Leuven_2/sub-0050751/anat/sub-0050751_T1w.nii.gz"
 ],
 "outputs": [
  "Leuven_2/sub-0050751"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

Leuven_2/sub-0050751/label/catROI_sub-0050751_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/xj/q4/MD5E-s61341--f4decc1ee89758a6fc17b24d07855b90.mat/MD5E-s61341--f4decc1ee89758a6fc17b24d07855b90.mat

Leuven_2/sub-0050751/label/catROI_sub-0050751_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/Fg/VW/MD5E-s189018--1a3a766da9e17eae1cfbcba994da0d65.xml/MD5E-s189018--1a3a766da9e17eae1cfbcba994da0d65.xml

Leuven_2/sub-0050751/label/catROIs_sub-0050751_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/4K/gv/MD5E-s120168--be1174cb6cd3626bbae42bebb8f33682.mat/MD5E-s120168--be1174cb6cd3626bbae42bebb8f33682.mat

Leuven_2/sub-0050751/label/catROIs_sub-0050751_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/gw/XZ/MD5E-s332069--67b3e5842fb89a92b020e90f506ca135.xml/MD5E-s332069--67b3e5842fb89a92b020e90f506ca135.xml

Leuven_2/sub-0050751/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050751_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

Leuven_2/sub-0050751/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/GQ/8f/MD5E-s166030--fe1f7979b9a1257cc981bdbf8e4c0e26.nii.gz/MD5E-s166030--fe1f7979b9a1257cc981bdbf8e4c0e26.nii.gz

Leuven_2/sub-0050751/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050751_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

Leuven_2/sub-0050751/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/k1/MQ/MD5E-s184844--c1eb1d4946b506b93a100b8d7013188e.nii.gz/MD5E-s184844--c1eb1d4946b506b93a100b8d7013188e.nii.gz

Leuven_2/sub-0050751/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050751_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

Leuven_2/sub-0050751/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/fQ/P1/MD5E-s237289--c7775e9130267d3dcbc75111c4b76eba.nii.gz/MD5E-s237289--c7775e9130267d3dcbc75111c4b76eba.nii.gz

Leuven_2/sub-0050751/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050751_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

Leuven_2/sub-0050751/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qk/FJ/MD5E-s263970--d1b2c65ec4b15cead077c3c64e99d805.nii.gz/MD5E-s263970--d1b2c65ec4b15cead077c3c64e99d805.nii.gz

Leuven_2/sub-0050751/mri/Tian_Subcortex_S2_7T_sub-0050751_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

Leuven_2/sub-0050751/mri/Tian_Subcortex_S2_7T_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/5v/zk/MD5E-s25077--d2831aaa4fd88b1b71529a13937929bf.nii.gz/MD5E-s25077--d2831aaa4fd88b1b71529a13937929bf.nii.gz

Leuven_2/sub-0050751/mri/aal3_sub-0050751_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

Leuven_2/sub-0050751/mri/aal3_sub-0050751_T1w.nii.gz

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Leuven_2/sub-0050751/mri/anatomy3_sub-0050751_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

Leuven_2/sub-0050751/mri/anatomy3_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/mx/00/MD5E-s134879--3f570b9348774ef3c8779d9b4c71d396.nii.gz/MD5E-s134879--3f570b9348774ef3c8779d9b4c71d396.nii.gz

Leuven_2/sub-0050751/mri/anon_misub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/40/kP/MD5E-s4417109--725e5b710e6c8e2c533ff74e07dd7de2.nii.gz/MD5E-s4417109--725e5b710e6c8e2c533ff74e07dd7de2.nii.gz

Leuven_2/sub-0050751/mri/anon_msub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vp/WM/MD5E-s11146498--95ec2ffd3a47e2a8921ec1fdcb3ed346.nii.gz/MD5E-s11146498--95ec2ffd3a47e2a8921ec1fdcb3ed346.nii.gz

Leuven_2/sub-0050751/mri/cat_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8v/J6/MD5E-s98001--aa39e4dda799aa7d48f54a6043bce5b4.nii.gz/MD5E-s98001--aa39e4dda799aa7d48f54a6043bce5b4.nii.gz

Leuven_2/sub-0050751/mri/cobra_sub-0050751_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

Leuven_2/sub-0050751/mri/cobra_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7M/44/MD5E-s50197--446c6bde02f8169f16310ce9af09d0ec.nii.gz/MD5E-s50197--446c6bde02f8169f16310ce9af09d0ec.nii.gz

Leuven_2/sub-0050751/mri/hammers_sub-0050751_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

Leuven_2/sub-0050751/mri/hammers_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050751/mri/ibsr_sub-0050751_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

Leuven_2/sub-0050751/mri/ibsr_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/V7/m9/MD5E-s151519--67d7003c82c6a520f2a83c16ea7889b4.nii.gz/MD5E-s151519--67d7003c82c6a520f2a83c16ea7889b4.nii.gz

Leuven_2/sub-0050751/mri/it_sub-0050751_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vp/VW/MD5E-s283--a11a7da5b3d43e72ab4779a045a2590b.mat/MD5E-s283--a11a7da5b3d43e72ab4779a045a2590b.mat

Leuven_2/sub-0050751/mri/it_sub-0050751_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/mw/3v/MD5E-s283--9fe8069f1a61519588765310eb94af94.mat/MD5E-s283--9fe8069f1a61519588765310eb94af94.mat

Leuven_2/sub-0050751/mri/iy_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/wV/vj/MD5E-s37655596--432e48708642dad0310f45884b374d84.nii.gz/MD5E-s37655596--432e48708642dad0310f45884b374d84.nii.gz

Leuven_2/sub-0050751/mri/julichbrain_sub-0050751_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

Leuven_2/sub-0050751/mri/julichbrain_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/g5/vV/MD5E-s197606--4811b449f2c5f22b877f1da96676bc33.nii.gz/MD5E-s197606--4811b449f2c5f22b877f1da96676bc33.nii.gz

Leuven_2/sub-0050751/mri/lpba40_sub-0050751_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

Leuven_2/sub-0050751/mri/lpba40_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050751/mri/m0wp1sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050751/mri/m0wp2sub-0050751_T1w.nii.gz

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Leuven_2/sub-0050751/mri/m0wp3sub-0050751_T1w.nii.gz

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Leuven_2/sub-0050751/mri/mori_sub-0050751_T1w.csv

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Leuven_2/sub-0050751/mri/mori_sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050751/mri/mwp1sub-0050751_T1w.nii.gz

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Leuven_2/sub-0050751/mri/mwp2sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6z/WJ/MD5E-s2274024--9f1bcd830fec7705a68d8bedf6ad06e1.nii.gz/MD5E-s2274024--9f1bcd830fec7705a68d8bedf6ad06e1.nii.gz

Leuven_2/sub-0050751/mri/mwp3sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Z7/w2/MD5E-s2506041--85521fc928a870a8b7fc59a19eaa087e.nii.gz/MD5E-s2506041--85521fc928a870a8b7fc59a19eaa087e.nii.gz

Leuven_2/sub-0050751/mri/neuromorphometrics_sub-0050751_T1w.csv

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Leuven_2/sub-0050751/mri/neuromorphometrics_sub-0050751_T1w.nii.gz

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Leuven_2/sub-0050751/mri/p0sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050751/mri/p1sub-0050751_T1w.nii.gz

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Leuven_2/sub-0050751/mri/p2sub-0050751_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050751/mri/p3sub-0050751_T1w.nii.gz

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Leuven_2/sub-0050751/mri/rp1sub-0050751_T1w_affine.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050751/mri/rp2sub-0050751_T1w_affine.nii.gz

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Leuven_2/sub-0050751/mri/rp3sub-0050751_T1w_affine.nii.gz

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+../../../.git/annex/objects/F3/G6/MD5E-s295699--4441241d1c6658f4ec636ba16e6e1817.nii.gz/MD5E-s295699--4441241d1c6658f4ec636ba16e6e1817.nii.gz

Leuven_2/sub-0050751/mri/t_sub-0050751_T1w_affine_reorient.mat

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Leuven_2/sub-0050751/mri/t_sub-0050751_T1w_rigid_reorient.mat

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Leuven_2/sub-0050751/mri/thalamus_sub-0050751_T1w.csv

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Leuven_2/sub-0050751/mri/thalamus_sub-0050751_T1w.nii.gz

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Leuven_2/sub-0050751/mri/wj_sub-0050751_T1w.nii.gz

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Leuven_2/sub-0050751/mri/wmisub-0050751_T1w.nii.gz

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Leuven_2/sub-0050751/mri/wmsub-0050751_T1w.nii.gz

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Leuven_2/sub-0050751/mri/wp0sub-0050751_T1w.nii.gz

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Leuven_2/sub-0050751/mri/wp1sub-0050751_T1w.nii.gz

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