[DATALAD RUNCMD] Compute MaxMun_d/sub-0051360

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/MaxMun_d/sub-0051360/anat/sub-0051360_T1w.nii.gz"
 ],
 "outputs": [
  "MaxMun_d/sub-0051360"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

MaxMun_d/sub-0051360/label/catROI_sub-0051360_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/W3/56/MD5E-s58076--45e267f53f05a8bf18b715ccc0fdc116.mat/MD5E-s58076--45e267f53f05a8bf18b715ccc0fdc116.mat

MaxMun_d/sub-0051360/label/catROI_sub-0051360_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/w4/zg/MD5E-s188629--502023a171e43465ff470abd02c2be2f.xml/MD5E-s188629--502023a171e43465ff470abd02c2be2f.xml

MaxMun_d/sub-0051360/label/catROIs_sub-0051360_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/3J/KP/MD5E-s120149--795256b247b293706f735ac41d7e1a45.mat/MD5E-s120149--795256b247b293706f735ac41d7e1a45.mat

MaxMun_d/sub-0051360/label/catROIs_sub-0051360_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/mj/jw/MD5E-s332127--f9058703d1faa0f5bd10f045a0b8f923.xml/MD5E-s332127--f9058703d1faa0f5bd10f045a0b8f923.xml

MaxMun_d/sub-0051360/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

MaxMun_d/sub-0051360/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/p9/Pm/MD5E-s172592--372478c1a78004ffc319f36d33602abf.nii.gz/MD5E-s172592--372478c1a78004ffc319f36d33602abf.nii.gz

MaxMun_d/sub-0051360/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

MaxMun_d/sub-0051360/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0F/9p/MD5E-s192626--9b6b7d8bec6ef7eabf6e638826e9a064.nii.gz/MD5E-s192626--9b6b7d8bec6ef7eabf6e638826e9a064.nii.gz

MaxMun_d/sub-0051360/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

MaxMun_d/sub-0051360/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/MZ/WM/MD5E-s262080--e58385fe4e88c34742cee8e65e0f8d53.nii.gz/MD5E-s262080--e58385fe4e88c34742cee8e65e0f8d53.nii.gz

MaxMun_d/sub-0051360/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

MaxMun_d/sub-0051360/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Q7/mq/MD5E-s290700--716324fa78b1f4f671620817ca50355e.nii.gz/MD5E-s290700--716324fa78b1f4f671620817ca50355e.nii.gz

MaxMun_d/sub-0051360/mri/Tian_Subcortex_S2_7T_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

MaxMun_d/sub-0051360/mri/Tian_Subcortex_S2_7T_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9q/FX/MD5E-s23230--0792cb29c5e60faa33f66e04fe7568a2.nii.gz/MD5E-s23230--0792cb29c5e60faa33f66e04fe7568a2.nii.gz

MaxMun_d/sub-0051360/mri/aal3_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

MaxMun_d/sub-0051360/mri/aal3_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/5Z/MD5E-s195191--632a8f468db41802a39a369963ebed3c.nii.gz/MD5E-s195191--632a8f468db41802a39a369963ebed3c.nii.gz

MaxMun_d/sub-0051360/mri/anatomy3_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

MaxMun_d/sub-0051360/mri/anatomy3_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pM/q5/MD5E-s141016--40fd5a37d456f4fde12e68ce4de2c523.nii.gz/MD5E-s141016--40fd5a37d456f4fde12e68ce4de2c523.nii.gz

MaxMun_d/sub-0051360/mri/anon_misub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/87/wQ/MD5E-s8665006--6d40b3b265b5e4df939c9faa14fac172.nii.gz/MD5E-s8665006--6d40b3b265b5e4df939c9faa14fac172.nii.gz

MaxMun_d/sub-0051360/mri/anon_msub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/61/JJ/MD5E-s9155262--352e73c1d4da076f92ea7253d2bee9ea.nii.gz/MD5E-s9155262--352e73c1d4da076f92ea7253d2bee9ea.nii.gz

MaxMun_d/sub-0051360/mri/cat_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/W2/M1/MD5E-s102131--23fe1e0ad5fe5a4a7a92e150c364b770.nii.gz/MD5E-s102131--23fe1e0ad5fe5a4a7a92e150c364b770.nii.gz

MaxMun_d/sub-0051360/mri/cobra_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

MaxMun_d/sub-0051360/mri/cobra_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/vq/Gz/MD5E-s48838--8e55c22f9d7c651048133efe9681b231.nii.gz/MD5E-s48838--8e55c22f9d7c651048133efe9681b231.nii.gz

MaxMun_d/sub-0051360/mri/hammers_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

MaxMun_d/sub-0051360/mri/hammers_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Zx/fj/MD5E-s155171--13526db3e7a0d62ed31f582172f5c1cd.nii.gz/MD5E-s155171--13526db3e7a0d62ed31f582172f5c1cd.nii.gz

MaxMun_d/sub-0051360/mri/ibsr_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

MaxMun_d/sub-0051360/mri/ibsr_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/32/Jj/MD5E-s162678--0d2c35eec4f464dd1ca78e6b6d880fbf.nii.gz/MD5E-s162678--0d2c35eec4f464dd1ca78e6b6d880fbf.nii.gz

MaxMun_d/sub-0051360/mri/it_sub-0051360_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/2g/gz/MD5E-s283--16f642c81cc756ca663a4227a979fe1b.mat/MD5E-s283--16f642c81cc756ca663a4227a979fe1b.mat

MaxMun_d/sub-0051360/mri/it_sub-0051360_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/JG/80/MD5E-s282--b5c406d15b40587d3990fa7914c456c1.mat/MD5E-s282--b5c406d15b40587d3990fa7914c456c1.mat

MaxMun_d/sub-0051360/mri/iy_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/f3/k0/MD5E-s49025320--6140a7ff6fff20a125f84c49793dd95c.nii.gz/MD5E-s49025320--6140a7ff6fff20a125f84c49793dd95c.nii.gz

MaxMun_d/sub-0051360/mri/julichbrain_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

MaxMun_d/sub-0051360/mri/julichbrain_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/80/xm/MD5E-s209881--9a5043038b7e6132ef3f4f3c507b649d.nii.gz/MD5E-s209881--9a5043038b7e6132ef3f4f3c507b649d.nii.gz

MaxMun_d/sub-0051360/mri/lpba40_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

MaxMun_d/sub-0051360/mri/lpba40_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0W/wG/MD5E-s151458--a17d0cc4c6c47e069cd0882296acb6b3.nii.gz/MD5E-s151458--a17d0cc4c6c47e069cd0882296acb6b3.nii.gz

MaxMun_d/sub-0051360/mri/m0wp1sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/0w/MD5E-s2571102--cf70a5c7d8f966bea58b5977773f013d.nii.gz/MD5E-s2571102--cf70a5c7d8f966bea58b5977773f013d.nii.gz

MaxMun_d/sub-0051360/mri/m0wp2sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/99/12/MD5E-s2303674--3de9b854ba5dee46f5a98ae526a280cb.nii.gz/MD5E-s2303674--3de9b854ba5dee46f5a98ae526a280cb.nii.gz

MaxMun_d/sub-0051360/mri/m0wp3sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/v2/ff/MD5E-s2358638--958be8929c93f7331244eac0d739808f.nii.gz/MD5E-s2358638--958be8929c93f7331244eac0d739808f.nii.gz

MaxMun_d/sub-0051360/mri/mori_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

MaxMun_d/sub-0051360/mri/mori_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Z5/F3/MD5E-s181943--98a99e1e83fe33ea6a30a36b82ddccd1.nii.gz/MD5E-s181943--98a99e1e83fe33ea6a30a36b82ddccd1.nii.gz

MaxMun_d/sub-0051360/mri/mwp1sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/k1/x8/MD5E-s2571234--f4e0d734e94b5a065ecdb2b5b01fc9c9.nii.gz/MD5E-s2571234--f4e0d734e94b5a065ecdb2b5b01fc9c9.nii.gz

MaxMun_d/sub-0051360/mri/mwp2sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/W3/w0/MD5E-s2297479--aa34ea258546485d641e1bb0fdecf8d9.nii.gz/MD5E-s2297479--aa34ea258546485d641e1bb0fdecf8d9.nii.gz

MaxMun_d/sub-0051360/mri/mwp3sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0g/4v/MD5E-s2355318--f88e75868543b42946ffd92f88f830a4.nii.gz/MD5E-s2355318--f88e75868543b42946ffd92f88f830a4.nii.gz

MaxMun_d/sub-0051360/mri/neuromorphometrics_sub-0051360_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

MaxMun_d/sub-0051360/mri/neuromorphometrics_sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051360/mri/p0sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qP/1p/MD5E-s647687--228311867b19904265963a1a16db9e2a.nii.gz/MD5E-s647687--228311867b19904265963a1a16db9e2a.nii.gz

MaxMun_d/sub-0051360/mri/p1sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051360/mri/p2sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051360/mri/p3sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/61/vw/MD5E-s350416--6728277151cb95c96aa55dece4a53ecd.nii.gz/MD5E-s350416--6728277151cb95c96aa55dece4a53ecd.nii.gz

MaxMun_d/sub-0051360/mri/rp1sub-0051360_T1w_affine.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051360/mri/rp2sub-0051360_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/G9/QG/MD5E-s312172--be0148d2fd6daab97fddef508a224bec.nii.gz/MD5E-s312172--be0148d2fd6daab97fddef508a224bec.nii.gz

MaxMun_d/sub-0051360/mri/rp3sub-0051360_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1K/zx/MD5E-s239953--0b2f21624793ae22b3e8cce2ead53d5b.nii.gz/MD5E-s239953--0b2f21624793ae22b3e8cce2ead53d5b.nii.gz

MaxMun_d/sub-0051360/mri/t_sub-0051360_T1w_affine_reorient.mat

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MaxMun_d/sub-0051360/mri/t_sub-0051360_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
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MaxMun_d/sub-0051360/mri/thalamus_sub-0051360_T1w.csv

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MaxMun_d/sub-0051360/mri/thalamus_sub-0051360_T1w.nii.gz

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MaxMun_d/sub-0051360/mri/wj_sub-0051360_T1w.nii.gz

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MaxMun_d/sub-0051360/mri/wmisub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051360/mri/wmsub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051360/mri/wp0sub-0051360_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051360/mri/wp1sub-0051360_T1w.nii.gz

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MaxMun_d/sub-0051360/mri/wp2sub-0051360_T1w.nii.gz

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MaxMun_d/sub-0051360/report/cat_sub-0051360_T1w.mat

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MaxMun_d/sub-0051360/report/catlog_sub-0051360_T1w.nii.txt

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MaxMun_d/sub-0051360/report/catreport_sub-0051360_T1w.pdf

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MaxMun_d/sub-0051360/report/catreportj_sub-0051360_T1w.jpg

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MaxMun_d/sub-0051360/surf/lh.area.sub-0051360_T1w

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MaxMun_d/sub-0051360/surf/rh.gmv.sub-0051360_T1w

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MaxMun_d/sub-0051360/surf/rh.pbt.sub-0051360_T1w

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MaxMun_d/sub-0051360/surf/s12.mesh.thickness.resampled_32k.sub-0051360_T1w.dat

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MaxMun_d/sub-0051360/surf/s22.mesh.area.resampled_32k.sub-0051360_T1w.dat

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MaxMun_d/sub-0051360/surf/s22.mesh.depth.resampled_32k.sub-0051360_T1w.dat

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MaxMun_d/sub-0051360/surf/s22.mesh.fractaldimension.resampled_32k.sub-0051360_T1w.dat

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