[DATALAD RUNCMD] Compute Trinity/sub-0050269

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/Trinity/sub-0050269/anat/sub-0050269_T1w.nii.gz"
 ],
 "outputs": [
  "Trinity/sub-0050269"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

Trinity/sub-0050269/label/catROI_sub-0050269_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/F2/km/MD5E-s61340--369826dff810688642ad732a4f2a6cfc.mat/MD5E-s61340--369826dff810688642ad732a4f2a6cfc.mat

Trinity/sub-0050269/label/catROI_sub-0050269_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/j6/Pq/MD5E-s188931--a31feca2ea403b094cc53d1c695e011f.xml/MD5E-s188931--a31feca2ea403b094cc53d1c695e011f.xml

Trinity/sub-0050269/label/catROIs_sub-0050269_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/mm/5Z/MD5E-s120086--e37547a38dee74f4f7f3d014f96c91c3.mat/MD5E-s120086--e37547a38dee74f4f7f3d014f96c91c3.mat

Trinity/sub-0050269/label/catROIs_sub-0050269_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/zf/vQ/MD5E-s332172--967e9312123ea5e8ce1114da87656ef7.xml/MD5E-s332172--967e9312123ea5e8ce1114da87656ef7.xml

Trinity/sub-0050269/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050269_T1w.csv

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Trinity/sub-0050269/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050269_T1w.nii.gz

@@ -0,0 +1 @@
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Trinity/sub-0050269/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050269_T1w.csv

@@ -0,0 +1 @@
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Trinity/sub-0050269/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050269_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

Trinity/sub-0050269/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050269_T1w.nii.gz

@@ -0,0 +1 @@
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Trinity/sub-0050269/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050269_T1w.csv

@@ -0,0 +1 @@
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Trinity/sub-0050269/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050269_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/f1/F5/MD5E-s278150--fb1da86c69f3c91574ad75bd45164dcb.nii.gz/MD5E-s278150--fb1da86c69f3c91574ad75bd45164dcb.nii.gz

Trinity/sub-0050269/mri/Tian_Subcortex_S2_7T_sub-0050269_T1w.csv

@@ -0,0 +1 @@
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Trinity/sub-0050269/mri/Tian_Subcortex_S2_7T_sub-0050269_T1w.nii.gz

@@ -0,0 +1 @@
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Trinity/sub-0050269/mri/aal3_sub-0050269_T1w.csv

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Trinity/sub-0050269/mri/aal3_sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/anatomy3_sub-0050269_T1w.csv

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Trinity/sub-0050269/mri/anatomy3_sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/anon_misub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/anon_msub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/cat_sub-0050269_T1w.nii.gz

@@ -0,0 +1 @@
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Trinity/sub-0050269/mri/cobra_sub-0050269_T1w.csv

@@ -0,0 +1 @@
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Trinity/sub-0050269/mri/cobra_sub-0050269_T1w.nii.gz

@@ -0,0 +1 @@
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Trinity/sub-0050269/mri/hammers_sub-0050269_T1w.csv

@@ -0,0 +1 @@
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Trinity/sub-0050269/mri/hammers_sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/ibsr_sub-0050269_T1w.csv

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Trinity/sub-0050269/mri/ibsr_sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/it_sub-0050269_T1w_affine_reorient.mat

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Trinity/sub-0050269/mri/it_sub-0050269_T1w_rigid_reorient.mat

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Trinity/sub-0050269/mri/iy_sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/julichbrain_sub-0050269_T1w.csv

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Trinity/sub-0050269/mri/julichbrain_sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/lpba40_sub-0050269_T1w.csv

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Trinity/sub-0050269/mri/lpba40_sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/m0wp1sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/m0wp2sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/m0wp3sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/mori_sub-0050269_T1w.csv

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Trinity/sub-0050269/mri/mori_sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/mwp1sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/mwp2sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/mwp3sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/neuromorphometrics_sub-0050269_T1w.csv

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Trinity/sub-0050269/mri/neuromorphometrics_sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/p0sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/p1sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/p2sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/p3sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/rp1sub-0050269_T1w_affine.nii.gz

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Trinity/sub-0050269/mri/rp2sub-0050269_T1w_affine.nii.gz

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Trinity/sub-0050269/mri/rp3sub-0050269_T1w_affine.nii.gz

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Trinity/sub-0050269/mri/t_sub-0050269_T1w_affine_reorient.mat

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Trinity/sub-0050269/mri/t_sub-0050269_T1w_rigid_reorient.mat

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Trinity/sub-0050269/mri/thalamus_sub-0050269_T1w.csv

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Trinity/sub-0050269/mri/thalamus_sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/wj_sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/wmisub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/wp0sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/wp1sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/wp2sub-0050269_T1w.nii.gz

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Trinity/sub-0050269/mri/wp3sub-0050269_T1w.nii.gz

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