[DATALAD RUNCMD] Compute Leuven_2/sub-0050737

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/Leuven_2/sub-0050737/anat/sub-0050737_T1w.nii.gz"
 ],
 "outputs": [
  "Leuven_2/sub-0050737"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

Leuven_2/sub-0050737/label/catROI_sub-0050737_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/mM/vx/MD5E-s61370--2d248773cc86694dc5e9db2fa925fba5.mat/MD5E-s61370--2d248773cc86694dc5e9db2fa925fba5.mat

Leuven_2/sub-0050737/label/catROI_sub-0050737_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/jg/m4/MD5E-s188667--b5734cc9bcfa932be11313b07af4e89e.xml/MD5E-s188667--b5734cc9bcfa932be11313b07af4e89e.xml

Leuven_2/sub-0050737/label/catROIs_sub-0050737_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/gk/Xx/MD5E-s120083--2d52fd31c7073f85c89f333e373de685.mat/MD5E-s120083--2d52fd31c7073f85c89f333e373de685.mat

Leuven_2/sub-0050737/label/catROIs_sub-0050737_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/m7/x0/MD5E-s332128--f3dfdf9c1c72899124094f28f280640f.xml/MD5E-s332128--f3dfdf9c1c72899124094f28f280640f.xml

Leuven_2/sub-0050737/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050737_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

Leuven_2/sub-0050737/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xq/mp/MD5E-s187788--c60b7cd472b47af44944b29c2b69a08a.nii.gz/MD5E-s187788--c60b7cd472b47af44944b29c2b69a08a.nii.gz

Leuven_2/sub-0050737/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050737_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

Leuven_2/sub-0050737/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/39/Pw/MD5E-s212111--9d29e15667f3e9c1d6538321a461924b.nii.gz/MD5E-s212111--9d29e15667f3e9c1d6538321a461924b.nii.gz

Leuven_2/sub-0050737/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050737_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

Leuven_2/sub-0050737/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1M/31/MD5E-s269288--ec5233ec4d971c08660b5af50665c2ed.nii.gz/MD5E-s269288--ec5233ec4d971c08660b5af50665c2ed.nii.gz

Leuven_2/sub-0050737/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050737_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

Leuven_2/sub-0050737/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/5w/W2/MD5E-s301020--1a91d3b234ab9338ed783a275cdd8b3c.nii.gz/MD5E-s301020--1a91d3b234ab9338ed783a275cdd8b3c.nii.gz

Leuven_2/sub-0050737/mri/Tian_Subcortex_S2_7T_sub-0050737_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

Leuven_2/sub-0050737/mri/Tian_Subcortex_S2_7T_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/J7/Kq/MD5E-s27089--bd00fb88008f7d64dd9320f367b820ca.nii.gz/MD5E-s27089--bd00fb88008f7d64dd9320f367b820ca.nii.gz

Leuven_2/sub-0050737/mri/aal3_sub-0050737_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

Leuven_2/sub-0050737/mri/aal3_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050737/mri/anatomy3_sub-0050737_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

Leuven_2/sub-0050737/mri/anatomy3_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/ZJ/Wf/MD5E-s151994--da6dddd74052bf35f51ecd8f70d7a9e9.nii.gz/MD5E-s151994--da6dddd74052bf35f51ecd8f70d7a9e9.nii.gz

Leuven_2/sub-0050737/mri/anon_misub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gJ/0Q/MD5E-s5746518--520ef5bf7d0277ec26729a4cb2a645db.nii.gz/MD5E-s5746518--520ef5bf7d0277ec26729a4cb2a645db.nii.gz

Leuven_2/sub-0050737/mri/anon_msub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Wf/8V/MD5E-s12018205--d26bb84b4e3b53693c1247668e351696.nii.gz/MD5E-s12018205--d26bb84b4e3b53693c1247668e351696.nii.gz

Leuven_2/sub-0050737/mri/cat_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/X0/Kz/MD5E-s110675--03b178e278c619915c7975a14fab5dd5.nii.gz/MD5E-s110675--03b178e278c619915c7975a14fab5dd5.nii.gz

Leuven_2/sub-0050737/mri/cobra_sub-0050737_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

Leuven_2/sub-0050737/mri/cobra_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pZ/jg/MD5E-s54567--0c005cb988e41e05573afd474d4f4434.nii.gz/MD5E-s54567--0c005cb988e41e05573afd474d4f4434.nii.gz

Leuven_2/sub-0050737/mri/hammers_sub-0050737_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

Leuven_2/sub-0050737/mri/hammers_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/zF/V9/MD5E-s166918--41a4c2347bba50afaf0238db4ad5ea59.nii.gz/MD5E-s166918--41a4c2347bba50afaf0238db4ad5ea59.nii.gz

Leuven_2/sub-0050737/mri/ibsr_sub-0050737_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

Leuven_2/sub-0050737/mri/ibsr_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qm/Jw/MD5E-s171661--d27dc9ef664a89f234f3d4d908c678de.nii.gz/MD5E-s171661--d27dc9ef664a89f234f3d4d908c678de.nii.gz

Leuven_2/sub-0050737/mri/it_sub-0050737_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/PX/6W/MD5E-s283--0d021e004009e35ed95fbfa3b144d15d.mat/MD5E-s283--0d021e004009e35ed95fbfa3b144d15d.mat

Leuven_2/sub-0050737/mri/it_sub-0050737_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/16/QW/MD5E-s283--4439b1e2eddba575450596aa3ff99923.mat/MD5E-s283--4439b1e2eddba575450596aa3ff99923.mat

Leuven_2/sub-0050737/mri/iy_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/v6/MD5E-s45042633--3a7113ef2ec514a9f2244f15ed1e6703.nii.gz/MD5E-s45042633--3a7113ef2ec514a9f2244f15ed1e6703.nii.gz

Leuven_2/sub-0050737/mri/julichbrain_sub-0050737_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

Leuven_2/sub-0050737/mri/julichbrain_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/W4/w4/MD5E-s225712--0fca9f3da08704715fd51b469a9a2fe2.nii.gz/MD5E-s225712--0fca9f3da08704715fd51b469a9a2fe2.nii.gz

Leuven_2/sub-0050737/mri/lpba40_sub-0050737_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

Leuven_2/sub-0050737/mri/lpba40_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050737/mri/m0wp1sub-0050737_T1w.nii.gz

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Leuven_2/sub-0050737/mri/m0wp2sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pk/Mz/MD5E-s2298967--2c253f8e3291c68d0403b9b89df39962.nii.gz/MD5E-s2298967--2c253f8e3291c68d0403b9b89df39962.nii.gz

Leuven_2/sub-0050737/mri/m0wp3sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050737/mri/mori_sub-0050737_T1w.csv

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Leuven_2/sub-0050737/mri/mori_sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050737/mri/mwp1sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/k5/v0/MD5E-s2615064--4049e69099520cdc3324a43d6a1faf5e.nii.gz/MD5E-s2615064--4049e69099520cdc3324a43d6a1faf5e.nii.gz

Leuven_2/sub-0050737/mri/mwp2sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/q0/vx/MD5E-s2295797--74bae613f770f1f512be547787041d2d.nii.gz/MD5E-s2295797--74bae613f770f1f512be547787041d2d.nii.gz

Leuven_2/sub-0050737/mri/mwp3sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050737/mri/neuromorphometrics_sub-0050737_T1w.csv

@@ -0,0 +1 @@
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Leuven_2/sub-0050737/mri/neuromorphometrics_sub-0050737_T1w.nii.gz

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Leuven_2/sub-0050737/mri/p0sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/kQ/3p/MD5E-s664948--df41cb13f2fb76807709c0980bb4a359.nii.gz/MD5E-s664948--df41cb13f2fb76807709c0980bb4a359.nii.gz

Leuven_2/sub-0050737/mri/p1sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050737/mri/p2sub-0050737_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050737/mri/p3sub-0050737_T1w.nii.gz

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Leuven_2/sub-0050737/mri/rp1sub-0050737_T1w_affine.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050737/mri/rp2sub-0050737_T1w_affine.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050737/mri/rp3sub-0050737_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/f1/g2/MD5E-s283774--a6ea8266933e9754a14b64e7625ce73b.nii.gz/MD5E-s283774--a6ea8266933e9754a14b64e7625ce73b.nii.gz

Leuven_2/sub-0050737/mri/t_sub-0050737_T1w_affine_reorient.mat

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Leuven_2/sub-0050737/mri/t_sub-0050737_T1w_rigid_reorient.mat

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Leuven_2/sub-0050737/mri/thalamus_sub-0050737_T1w.csv

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Leuven_2/sub-0050737/mri/thalamus_sub-0050737_T1w.nii.gz

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Leuven_2/sub-0050737/mri/wj_sub-0050737_T1w.nii.gz

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Leuven_2/sub-0050737/mri/wmisub-0050737_T1w.nii.gz

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Leuven_2/sub-0050737/mri/wmsub-0050737_T1w.nii.gz

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Leuven_2/sub-0050737/mri/wp0sub-0050737_T1w.nii.gz

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Leuven_2/sub-0050737/mri/wp1sub-0050737_T1w.nii.gz

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