[DATALAD RUNCMD] Compute SBL/sub-0051583

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/SBL/sub-0051583/anat/sub-0051583_T1w.nii.gz"
 ],
 "outputs": [
  "SBL/sub-0051583"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

SBL/sub-0051583/label/catROI_sub-0051583_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/G9/Wj/MD5E-s61376--62e51e8a7455f52a9aadd9034bbe3208.mat/MD5E-s61376--62e51e8a7455f52a9aadd9034bbe3208.mat

SBL/sub-0051583/label/catROI_sub-0051583_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/7m/8q/MD5E-s188739--7c01b3ade502974fefe8d56f4f09dc79.xml/MD5E-s188739--7c01b3ade502974fefe8d56f4f09dc79.xml

SBL/sub-0051583/label/catROIs_sub-0051583_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/2G/Vv/MD5E-s120117--a284e7366cfa19e7f9eb443b3d21dbef.mat/MD5E-s120117--a284e7366cfa19e7f9eb443b3d21dbef.mat

SBL/sub-0051583/label/catROIs_sub-0051583_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/21/q4/MD5E-s332131--bc9b8a2c79314089596224faca963fea.xml/MD5E-s332131--bc9b8a2c79314089596224faca963fea.xml

SBL/sub-0051583/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

SBL/sub-0051583/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Wv/0G/MD5E-s209957--0007843cf753dc7299f0b46706753f14.nii.gz/MD5E-s209957--0007843cf753dc7299f0b46706753f14.nii.gz

SBL/sub-0051583/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

SBL/sub-0051583/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xg/Qf/MD5E-s236242--42169fc9ea064d5e847c9d628cf13d91.nii.gz/MD5E-s236242--42169fc9ea064d5e847c9d628cf13d91.nii.gz

SBL/sub-0051583/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

SBL/sub-0051583/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/p7/8Z/MD5E-s298938--72a517133ec3f553e7d673d8b1f58de1.nii.gz/MD5E-s298938--72a517133ec3f553e7d673d8b1f58de1.nii.gz

SBL/sub-0051583/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

SBL/sub-0051583/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1P/qm/MD5E-s333193--a816fc50c788cda7692914a6142e3d7a.nii.gz/MD5E-s333193--a816fc50c788cda7692914a6142e3d7a.nii.gz

SBL/sub-0051583/mri/Tian_Subcortex_S2_7T_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

SBL/sub-0051583/mri/Tian_Subcortex_S2_7T_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jF/8G/MD5E-s27389--6bed56e80da4a6d3079298ae93e0c493.nii.gz/MD5E-s27389--6bed56e80da4a6d3079298ae93e0c493.nii.gz

SBL/sub-0051583/mri/aal3_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

SBL/sub-0051583/mri/aal3_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4F/4q/MD5E-s235465--330e044cabc4b1b538173d21025f9257.nii.gz/MD5E-s235465--330e044cabc4b1b538173d21025f9257.nii.gz

SBL/sub-0051583/mri/anatomy3_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

SBL/sub-0051583/mri/anatomy3_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/F6/JK/MD5E-s169261--7ff614cb40d47b3c1c9058ca9f8abaa6.nii.gz/MD5E-s169261--7ff614cb40d47b3c1c9058ca9f8abaa6.nii.gz

SBL/sub-0051583/mri/anon_misub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/39/FP/MD5E-s5361779--6a6aace2accd30538ca507e23caa31eb.nii.gz/MD5E-s5361779--6a6aace2accd30538ca507e23caa31eb.nii.gz

SBL/sub-0051583/mri/anon_msub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7v/pw/MD5E-s11488555--da6126eb1bbcd163acc0884d6999a6f8.nii.gz/MD5E-s11488555--da6126eb1bbcd163acc0884d6999a6f8.nii.gz

SBL/sub-0051583/mri/cat_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/5J/JF/MD5E-s136172--31d292d762501645ce14c4606c58346c.nii.gz/MD5E-s136172--31d292d762501645ce14c4606c58346c.nii.gz

SBL/sub-0051583/mri/cobra_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

SBL/sub-0051583/mri/cobra_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/2K/3w/MD5E-s56307--2dd3179157b218873056c799ec56f074.nii.gz/MD5E-s56307--2dd3179157b218873056c799ec56f074.nii.gz

SBL/sub-0051583/mri/hammers_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

SBL/sub-0051583/mri/hammers_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7x/0Q/MD5E-s184541--80883f37be75f0aaecf92930598773d5.nii.gz/MD5E-s184541--80883f37be75f0aaecf92930598773d5.nii.gz

SBL/sub-0051583/mri/ibsr_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

SBL/sub-0051583/mri/ibsr_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/vF/4f/MD5E-s191949--4fe51d5dc51dfc85f9d13f78cdc7edee.nii.gz/MD5E-s191949--4fe51d5dc51dfc85f9d13f78cdc7edee.nii.gz

SBL/sub-0051583/mri/it_sub-0051583_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/kx/MD5E-s284--fadb411525b7792d6d9de54a6804e888.mat/MD5E-s284--fadb411525b7792d6d9de54a6804e888.mat

SBL/sub-0051583/mri/it_sub-0051583_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/3V/6w/MD5E-s284--2d98b52b8f51c03b5dbba42fcf700aea.mat/MD5E-s284--2d98b52b8f51c03b5dbba42fcf700aea.mat

SBL/sub-0051583/mri/iy_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/X4/5K/MD5E-s55143546--6b57d654324dd1f86c0100556dbb5c3d.nii.gz/MD5E-s55143546--6b57d654324dd1f86c0100556dbb5c3d.nii.gz

SBL/sub-0051583/mri/julichbrain_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

SBL/sub-0051583/mri/julichbrain_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8X/fx/MD5E-s250583--a5c89309d139eed5349cbe27e340665a.nii.gz/MD5E-s250583--a5c89309d139eed5349cbe27e340665a.nii.gz

SBL/sub-0051583/mri/lpba40_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

SBL/sub-0051583/mri/lpba40_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1x/WV/MD5E-s182830--93d7fb7f0468e177c45d30fadf0abdac.nii.gz/MD5E-s182830--93d7fb7f0468e177c45d30fadf0abdac.nii.gz

SBL/sub-0051583/mri/m0wp1sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mz/Xg/MD5E-s2580084--e897d3398a7b84f05cbc6a57a9471a45.nii.gz/MD5E-s2580084--e897d3398a7b84f05cbc6a57a9471a45.nii.gz

SBL/sub-0051583/mri/m0wp2sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/m6/19/MD5E-s2442188--85ee13ce6d5e88dc5b46e077ec246a3f.nii.gz/MD5E-s2442188--85ee13ce6d5e88dc5b46e077ec246a3f.nii.gz

SBL/sub-0051583/mri/m0wp3sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jW/vV/MD5E-s2551365--bfc27da3a31a0587f5594143f7a4ebb3.nii.gz/MD5E-s2551365--bfc27da3a31a0587f5594143f7a4ebb3.nii.gz

SBL/sub-0051583/mri/mori_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

SBL/sub-0051583/mri/mori_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0k/vP/MD5E-s214656--bc924bf5bf3db405aff5e0009d60be4a.nii.gz/MD5E-s214656--bc924bf5bf3db405aff5e0009d60be4a.nii.gz

SBL/sub-0051583/mri/mwp1sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pq/gQ/MD5E-s2578943--f1f9cc4ac783a0b4bfb41517d6756f0b.nii.gz/MD5E-s2578943--f1f9cc4ac783a0b4bfb41517d6756f0b.nii.gz

SBL/sub-0051583/mri/mwp2sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/12/qv/MD5E-s2439697--bb69f5bb4f2b3006cb8ddc040ac6339c.nii.gz/MD5E-s2439697--bb69f5bb4f2b3006cb8ddc040ac6339c.nii.gz

SBL/sub-0051583/mri/mwp3sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1m/kk/MD5E-s2549109--dfd1d7ed9c41542ea28cb78cf429b213.nii.gz/MD5E-s2549109--dfd1d7ed9c41542ea28cb78cf429b213.nii.gz

SBL/sub-0051583/mri/neuromorphometrics_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

SBL/sub-0051583/mri/neuromorphometrics_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/j9/V7/MD5E-s248552--3a050e042111841cf6f58bdca2821599.nii.gz/MD5E-s248552--3a050e042111841cf6f58bdca2821599.nii.gz

SBL/sub-0051583/mri/p0sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/ZM/zk/MD5E-s784015--ed9e32b64a7321564db8570067b374ce.nii.gz/MD5E-s784015--ed9e32b64a7321564db8570067b374ce.nii.gz

SBL/sub-0051583/mri/p1sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/p4/Jp/MD5E-s828518--fc8a3944144ac823a7fb07a3b24411e2.nii.gz/MD5E-s828518--fc8a3944144ac823a7fb07a3b24411e2.nii.gz

SBL/sub-0051583/mri/p2sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Zv/1q/MD5E-s559851--b598f7aa3d0a51304b493b832c2661ff.nii.gz/MD5E-s559851--b598f7aa3d0a51304b493b832c2661ff.nii.gz

SBL/sub-0051583/mri/p3sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/K0/4p/MD5E-s476049--bb49cffc8e423ef2985d9072b3076ee6.nii.gz/MD5E-s476049--bb49cffc8e423ef2985d9072b3076ee6.nii.gz

SBL/sub-0051583/mri/rp1sub-0051583_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xk/JW/MD5E-s447010--0b3fa2f9899771746d9a90b9ec0b1521.nii.gz/MD5E-s447010--0b3fa2f9899771746d9a90b9ec0b1521.nii.gz

SBL/sub-0051583/mri/rp2sub-0051583_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/J4/kz/MD5E-s323547--0ce7ff7f1b7f556796710ea15277d2c0.nii.gz/MD5E-s323547--0ce7ff7f1b7f556796710ea15277d2c0.nii.gz

SBL/sub-0051583/mri/rp3sub-0051583_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0Z/wK/MD5E-s297015--23985018e51755432551a1f54db54334.nii.gz/MD5E-s297015--23985018e51755432551a1f54db54334.nii.gz

SBL/sub-0051583/mri/t_sub-0051583_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/vX/J2/MD5E-s284--d42df97f744d6c39aaec2bcaef610ba0.mat/MD5E-s284--d42df97f744d6c39aaec2bcaef610ba0.mat

SBL/sub-0051583/mri/t_sub-0051583_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/zf/9z/MD5E-s283--134314bd631b89dae90c1cac14f6892a.mat/MD5E-s283--134314bd631b89dae90c1cac14f6892a.mat

SBL/sub-0051583/mri/thalamus_sub-0051583_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fW/VK/MD5E-s870--1d6eb64a1942214ec592afc1dbf8fbb2.csv/MD5E-s870--1d6eb64a1942214ec592afc1dbf8fbb2.csv

SBL/sub-0051583/mri/thalamus_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051583/mri/wj_sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/11/6w/MD5E-s5562476--eb0be8e0e88b9118518a397daa838aff.nii.gz/MD5E-s5562476--eb0be8e0e88b9118518a397daa838aff.nii.gz

SBL/sub-0051583/mri/wmisub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051583/mri/wmsub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/k8/vG/MD5E-s1188928--476925e701594a1d51b92e04e6dd822d.nii.gz/MD5E-s1188928--476925e701594a1d51b92e04e6dd822d.nii.gz

SBL/sub-0051583/mri/wp0sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051583/mri/wp1sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pk/xj/MD5E-s579703--dac043196b7570e03d0237d399d1b522.nii.gz/MD5E-s579703--dac043196b7570e03d0237d399d1b522.nii.gz

SBL/sub-0051583/mri/wp2sub-0051583_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pz/87/MD5E-s481578--c44555819c9ab8e8518426951f2183fc.nii.gz/MD5E-s481578--c44555819c9ab8e8518426951f2183fc.nii.gz

SBL/sub-0051583/mri/wp3sub-0051583_T1w.nii.gz

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