[DATALAD RUNCMD] Compute SBL/sub-0051566

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/SBL/sub-0051566/anat/sub-0051566_T1w.nii.gz"
 ],
 "outputs": [
  "SBL/sub-0051566"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

SBL/sub-0051566/label/catROI_sub-0051566_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/q6/vw/MD5E-s61348--ce03f3f240b0182700f825895ede1b96.mat/MD5E-s61348--ce03f3f240b0182700f825895ede1b96.mat

SBL/sub-0051566/label/catROI_sub-0051566_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/1v/Gk/MD5E-s188731--3868d808695af5f3f4f97ac85a8bf919.xml/MD5E-s188731--3868d808695af5f3f4f97ac85a8bf919.xml

SBL/sub-0051566/label/catROIs_sub-0051566_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Zg/25/MD5E-s120112--b3cffda7735a887ea68ff5319b106045.mat/MD5E-s120112--b3cffda7735a887ea68ff5319b106045.mat

SBL/sub-0051566/label/catROIs_sub-0051566_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/M1/2x/MD5E-s332087--8a54440277bfcf85b903b502c08f1730.xml/MD5E-s332087--8a54440277bfcf85b903b502c08f1730.xml

SBL/sub-0051566/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

SBL/sub-0051566/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/kw/v8/MD5E-s201463--5a1030e034bb9fdfb4fec5d95dcf925c.nii.gz/MD5E-s201463--5a1030e034bb9fdfb4fec5d95dcf925c.nii.gz

SBL/sub-0051566/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

SBL/sub-0051566/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/wk/4K/MD5E-s225432--cb00555ec28b7194cd1b92ebab156f80.nii.gz/MD5E-s225432--cb00555ec28b7194cd1b92ebab156f80.nii.gz

SBL/sub-0051566/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

SBL/sub-0051566/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/zZ/Qw/MD5E-s284084--d7b1f18dc99dd7473432d46e3067db93.nii.gz/MD5E-s284084--d7b1f18dc99dd7473432d46e3067db93.nii.gz

SBL/sub-0051566/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

SBL/sub-0051566/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/zz/W9/MD5E-s315320--76ce8baed66b1b2834383283541a5990.nii.gz/MD5E-s315320--76ce8baed66b1b2834383283541a5990.nii.gz

SBL/sub-0051566/mri/Tian_Subcortex_S2_7T_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

SBL/sub-0051566/mri/Tian_Subcortex_S2_7T_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/P0/9J/MD5E-s25724--776e7ed2cd6ef11795ad338ef7768583.nii.gz/MD5E-s25724--776e7ed2cd6ef11795ad338ef7768583.nii.gz

SBL/sub-0051566/mri/aal3_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

SBL/sub-0051566/mri/aal3_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pj/p0/MD5E-s223949--5d0c5dfbcc5da7e6bb31697bd2b922f1.nii.gz/MD5E-s223949--5d0c5dfbcc5da7e6bb31697bd2b922f1.nii.gz

SBL/sub-0051566/mri/anatomy3_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

SBL/sub-0051566/mri/anatomy3_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/J8/Q1/MD5E-s162209--360b5a3eaf5179c4680647f9af5839d4.nii.gz/MD5E-s162209--360b5a3eaf5179c4680647f9af5839d4.nii.gz

SBL/sub-0051566/mri/anon_misub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/21/PZ/MD5E-s4924364--8ba4bd2c3b53f71df793668c74bf5ae8.nii.gz/MD5E-s4924364--8ba4bd2c3b53f71df793668c74bf5ae8.nii.gz

SBL/sub-0051566/mri/anon_msub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3M/64/MD5E-s10845415--0928806aa7e4babb87f66121852a4894.nii.gz/MD5E-s10845415--0928806aa7e4babb87f66121852a4894.nii.gz

SBL/sub-0051566/mri/cat_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qZ/f9/MD5E-s122598--d6c05f1ba6b0ff0698cfadb7086aea5a.nii.gz/MD5E-s122598--d6c05f1ba6b0ff0698cfadb7086aea5a.nii.gz

SBL/sub-0051566/mri/cobra_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

SBL/sub-0051566/mri/cobra_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/52/Fp/MD5E-s53886--9c0cfd9fed6a22ec4619d2679c2af144.nii.gz/MD5E-s53886--9c0cfd9fed6a22ec4619d2679c2af144.nii.gz

SBL/sub-0051566/mri/hammers_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

SBL/sub-0051566/mri/hammers_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/vF/5G/MD5E-s174679--2eb802eaf6538fd1ed3e26f2a86d3dc7.nii.gz/MD5E-s174679--2eb802eaf6538fd1ed3e26f2a86d3dc7.nii.gz

SBL/sub-0051566/mri/ibsr_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

SBL/sub-0051566/mri/ibsr_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Zg/3k/MD5E-s180433--98260fe8a38dd735935cefe812a85ff4.nii.gz/MD5E-s180433--98260fe8a38dd735935cefe812a85ff4.nii.gz

SBL/sub-0051566/mri/it_sub-0051566_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/pJ/pW/MD5E-s283--eb60407ab77da984a5a30efb6e1d650d.mat/MD5E-s283--eb60407ab77da984a5a30efb6e1d650d.mat

SBL/sub-0051566/mri/it_sub-0051566_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/z6/Zf/MD5E-s282--1cd968e0972b4bd16e5317757e39deeb.mat/MD5E-s282--1cd968e0972b4bd16e5317757e39deeb.mat

SBL/sub-0051566/mri/iy_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vv/Mk/MD5E-s49174260--daeb068d02a5f1cf77837a601255f356.nii.gz/MD5E-s49174260--daeb068d02a5f1cf77837a601255f356.nii.gz

SBL/sub-0051566/mri/julichbrain_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

SBL/sub-0051566/mri/julichbrain_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Kx/fk/MD5E-s240990--cab2571c5f218b70139f4a5ad369f2c0.nii.gz/MD5E-s240990--cab2571c5f218b70139f4a5ad369f2c0.nii.gz

SBL/sub-0051566/mri/lpba40_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

SBL/sub-0051566/mri/lpba40_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/X6/JP/MD5E-s173073--cd76056aa292edf02617cb5d3d6d15ba.nii.gz/MD5E-s173073--cd76056aa292edf02617cb5d3d6d15ba.nii.gz

SBL/sub-0051566/mri/m0wp1sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/p8/3X/MD5E-s2572725--ee4a87b169eb18f7bfdd14d8a2ca939a.nii.gz/MD5E-s2572725--ee4a87b169eb18f7bfdd14d8a2ca939a.nii.gz

SBL/sub-0051566/mri/m0wp2sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7p/xx/MD5E-s2408715--124b6204aa12a22c9622127289caafca.nii.gz/MD5E-s2408715--124b6204aa12a22c9622127289caafca.nii.gz

SBL/sub-0051566/mri/m0wp3sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gz/j5/MD5E-s2484329--6837bea5aacb7b40173501b0407ac8a7.nii.gz/MD5E-s2484329--6837bea5aacb7b40173501b0407ac8a7.nii.gz

SBL/sub-0051566/mri/mori_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

SBL/sub-0051566/mri/mori_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/20/q6/MD5E-s201842--789ff717dd1c62c152778da5a0a3f235.nii.gz/MD5E-s201842--789ff717dd1c62c152778da5a0a3f235.nii.gz

SBL/sub-0051566/mri/mwp1sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6P/JG/MD5E-s2573978--9d71a01d03029eec55d0146744ec793e.nii.gz/MD5E-s2573978--9d71a01d03029eec55d0146744ec793e.nii.gz

SBL/sub-0051566/mri/mwp2sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/wp/V1/MD5E-s2406136--b75ea98f0934558ceab3b94335b868f2.nii.gz/MD5E-s2406136--b75ea98f0934558ceab3b94335b868f2.nii.gz

SBL/sub-0051566/mri/mwp3sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/QJ/f1/MD5E-s2482911--f298593c412f8fdbcfc6b76893f11a0b.nii.gz/MD5E-s2482911--f298593c412f8fdbcfc6b76893f11a0b.nii.gz

SBL/sub-0051566/mri/neuromorphometrics_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

SBL/sub-0051566/mri/neuromorphometrics_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/KW/GJ/MD5E-s232750--5c7ea5e655ec5719ae8d5faa141e1666.nii.gz/MD5E-s232750--5c7ea5e655ec5719ae8d5faa141e1666.nii.gz

SBL/sub-0051566/mri/p0sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Wv/Z6/MD5E-s739052--cb01e96b82eb5f69b6a6b7f437b025d1.nii.gz/MD5E-s739052--cb01e96b82eb5f69b6a6b7f437b025d1.nii.gz

SBL/sub-0051566/mri/p1sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jz/27/MD5E-s795971--2c251c2e46173063cefa3ae7fa51ce56.nii.gz/MD5E-s795971--2c251c2e46173063cefa3ae7fa51ce56.nii.gz

SBL/sub-0051566/mri/p2sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4G/p6/MD5E-s544575--9e85d9f373a436fe0f27afe658e1f01e.nii.gz/MD5E-s544575--9e85d9f373a436fe0f27afe658e1f01e.nii.gz

SBL/sub-0051566/mri/p3sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/XV/6g/MD5E-s421295--7f8bcfc6b661cb5a60a374d84e9c16ee.nii.gz/MD5E-s421295--7f8bcfc6b661cb5a60a374d84e9c16ee.nii.gz

SBL/sub-0051566/mri/rp1sub-0051566_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0j/4F/MD5E-s456098--18f6221a0c0182cdff01fc408040b983.nii.gz/MD5E-s456098--18f6221a0c0182cdff01fc408040b983.nii.gz

SBL/sub-0051566/mri/rp2sub-0051566_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gJ/G0/MD5E-s332220--e6e510e9250c89c072366e1f1ce18575.nii.gz/MD5E-s332220--e6e510e9250c89c072366e1f1ce18575.nii.gz

SBL/sub-0051566/mri/rp3sub-0051566_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/W4/gX/MD5E-s278541--45f2f8d7693e8d9d6a52c3ca9e37b116.nii.gz/MD5E-s278541--45f2f8d7693e8d9d6a52c3ca9e37b116.nii.gz

SBL/sub-0051566/mri/t_sub-0051566_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/2J/fp/MD5E-s283--604f43780b92a7dfd1378b800984a743.mat/MD5E-s283--604f43780b92a7dfd1378b800984a743.mat

SBL/sub-0051566/mri/t_sub-0051566_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xp/fQ/MD5E-s283--ebf320d88fb3e6dce6a1622f8006b1be.mat/MD5E-s283--ebf320d88fb3e6dce6a1622f8006b1be.mat

SBL/sub-0051566/mri/thalamus_sub-0051566_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fW/VK/MD5E-s870--1d6eb64a1942214ec592afc1dbf8fbb2.csv/MD5E-s870--1d6eb64a1942214ec592afc1dbf8fbb2.csv

SBL/sub-0051566/mri/thalamus_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051566/mri/wj_sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051566/mri/wmisub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051566/mri/wmsub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051566/mri/wp0sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051566/mri/wp1sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/QF/Qz/MD5E-s579934--057fb90ee69a2e125a2d824f53eef930.nii.gz/MD5E-s579934--057fb90ee69a2e125a2d824f53eef930.nii.gz

SBL/sub-0051566/mri/wp2sub-0051566_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/m1/vk/MD5E-s479299--dda53ce629f65e33bdda4a5f1b3a065b.nii.gz/MD5E-s479299--dda53ce629f65e33bdda4a5f1b3a065b.nii.gz

SBL/sub-0051566/mri/wp3sub-0051566_T1w.nii.gz

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