[DATALAD RUNCMD] Compute Pitt/sub-0050050

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/Pitt/sub-0050050/anat/sub-0050050_T1w.nii.gz"
 ],
 "outputs": [
  "Pitt/sub-0050050"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

Pitt/sub-0050050/label/catROI_sub-0050050_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/p1/zW/MD5E-s61325--dac55fb2ea3797dbafb8a1d2880b2407.mat/MD5E-s61325--dac55fb2ea3797dbafb8a1d2880b2407.mat

Pitt/sub-0050050/label/catROI_sub-0050050_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/JP/j0/MD5E-s188433--0b458e6b351397fafd500e50afc9e043.xml/MD5E-s188433--0b458e6b351397fafd500e50afc9e043.xml

Pitt/sub-0050050/label/catROIs_sub-0050050_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/vK/0g/MD5E-s120121--46012307a8b4f62184fe417eb9dca75a.mat/MD5E-s120121--46012307a8b4f62184fe417eb9dca75a.mat

Pitt/sub-0050050/label/catROIs_sub-0050050_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/Zp/Fx/MD5E-s332148--c46212f44a3c32fdea805f99b2145905.xml/MD5E-s332148--c46212f44a3c32fdea805f99b2145905.xml

Pitt/sub-0050050/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050050_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

Pitt/sub-0050050/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050050_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7v/Xk/MD5E-s173287--78f29796b5addde11086987e17379989.nii.gz/MD5E-s173287--78f29796b5addde11086987e17379989.nii.gz

Pitt/sub-0050050/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050050_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

Pitt/sub-0050050/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050050_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Z4/K1/MD5E-s193674--f097fd514bed5e9e036bfe1b6b01321a.nii.gz/MD5E-s193674--f097fd514bed5e9e036bfe1b6b01321a.nii.gz

Pitt/sub-0050050/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050050_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

Pitt/sub-0050050/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050050_T1w.nii.gz

@@ -0,0 +1 @@
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Pitt/sub-0050050/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050050_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

Pitt/sub-0050050/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050050_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/JG/0P/MD5E-s289838--dc7ddb650ed21413aa0348b27339caa9.nii.gz/MD5E-s289838--dc7ddb650ed21413aa0348b27339caa9.nii.gz

Pitt/sub-0050050/mri/Tian_Subcortex_S2_7T_sub-0050050_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

Pitt/sub-0050050/mri/Tian_Subcortex_S2_7T_sub-0050050_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/VV/Gv/MD5E-s25112--ad49d26e88a0dfc0d5e0cf31ad06f091.nii.gz/MD5E-s25112--ad49d26e88a0dfc0d5e0cf31ad06f091.nii.gz

Pitt/sub-0050050/mri/aal3_sub-0050050_T1w.csv

@@ -0,0 +1 @@
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Pitt/sub-0050050/mri/aal3_sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/anatomy3_sub-0050050_T1w.csv

@@ -0,0 +1 @@
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Pitt/sub-0050050/mri/anatomy3_sub-0050050_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/vp/j0/MD5E-s141114--826cb71ef335d282d6b783a99f901c53.nii.gz/MD5E-s141114--826cb71ef335d282d6b783a99f901c53.nii.gz

Pitt/sub-0050050/mri/anon_misub-0050050_T1w.nii.gz

@@ -0,0 +1 @@
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Pitt/sub-0050050/mri/anon_msub-0050050_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/KP/2Z/MD5E-s12205816--771bf1f8baf9dde1aed4c22b5855eff6.nii.gz/MD5E-s12205816--771bf1f8baf9dde1aed4c22b5855eff6.nii.gz

Pitt/sub-0050050/mri/cat_sub-0050050_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/p5/z3/MD5E-s100745--bc9a5ee5a768feb443fa171937b19d4d.nii.gz/MD5E-s100745--bc9a5ee5a768feb443fa171937b19d4d.nii.gz

Pitt/sub-0050050/mri/cobra_sub-0050050_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

Pitt/sub-0050050/mri/cobra_sub-0050050_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vp/vf/MD5E-s49716--daca10637ff8c3bb877edc636dd44997.nii.gz/MD5E-s49716--daca10637ff8c3bb877edc636dd44997.nii.gz

Pitt/sub-0050050/mri/hammers_sub-0050050_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

Pitt/sub-0050050/mri/hammers_sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/ibsr_sub-0050050_T1w.csv

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Pitt/sub-0050050/mri/ibsr_sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/it_sub-0050050_T1w_affine_reorient.mat

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Pitt/sub-0050050/mri/it_sub-0050050_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Gk/f3/MD5E-s281--b702b3bd9f18a86102d1f724a172b4fc.mat/MD5E-s281--b702b3bd9f18a86102d1f724a172b4fc.mat

Pitt/sub-0050050/mri/iy_sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/julichbrain_sub-0050050_T1w.csv

@@ -0,0 +1 @@
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Pitt/sub-0050050/mri/julichbrain_sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/lpba40_sub-0050050_T1w.csv

@@ -0,0 +1 @@
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Pitt/sub-0050050/mri/lpba40_sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/m0wp1sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/m0wp2sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/m0wp3sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/mori_sub-0050050_T1w.csv

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Pitt/sub-0050050/mri/mori_sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/mwp1sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/mwp2sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/mwp3sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/neuromorphometrics_sub-0050050_T1w.csv

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Pitt/sub-0050050/mri/neuromorphometrics_sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/p0sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/p1sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/p2sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/p3sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/rp1sub-0050050_T1w_affine.nii.gz

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Pitt/sub-0050050/mri/rp2sub-0050050_T1w_affine.nii.gz

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Pitt/sub-0050050/mri/rp3sub-0050050_T1w_affine.nii.gz

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Pitt/sub-0050050/mri/t_sub-0050050_T1w_affine_reorient.mat

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Pitt/sub-0050050/mri/t_sub-0050050_T1w_rigid_reorient.mat

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Pitt/sub-0050050/mri/thalamus_sub-0050050_T1w.csv

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Pitt/sub-0050050/mri/thalamus_sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/wj_sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/wmisub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/wmsub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/wp0sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/wp1sub-0050050_T1w.nii.gz

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Pitt/sub-0050050/mri/wp2sub-0050050_T1w.nii.gz

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