[DATALAD RUNCMD] Compute MaxMun_d/sub-0051357

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/MaxMun_d/sub-0051357/anat/sub-0051357_T1w.nii.gz"
 ],
 "outputs": [
  "MaxMun_d/sub-0051357"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

MaxMun_d/sub-0051357/label/catROI_sub-0051357_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/G9/2j/MD5E-s57798--336dc93797837c747b1c78aa1bdb6dc8.mat/MD5E-s57798--336dc93797837c747b1c78aa1bdb6dc8.mat

MaxMun_d/sub-0051357/label/catROI_sub-0051357_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/GV/JZ/MD5E-s188882--1979b772175860ce675884f928b4872a.xml/MD5E-s188882--1979b772175860ce675884f928b4872a.xml

MaxMun_d/sub-0051357/label/catROIs_sub-0051357_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vp/FV/MD5E-s120092--984d694bff78ebae72fd134edbef16eb.mat/MD5E-s120092--984d694bff78ebae72fd134edbef16eb.mat

MaxMun_d/sub-0051357/label/catROIs_sub-0051357_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/56/f0/MD5E-s332164--a764694bc39749f45d7effcf7ff70cc1.xml/MD5E-s332164--a764694bc39749f45d7effcf7ff70cc1.xml

MaxMun_d/sub-0051357/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

MaxMun_d/sub-0051357/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/31/GZ/MD5E-s166683--a3a6140621c7d3508f85fee8a30f94b4.nii.gz/MD5E-s166683--a3a6140621c7d3508f85fee8a30f94b4.nii.gz

MaxMun_d/sub-0051357/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

MaxMun_d/sub-0051357/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jk/42/MD5E-s186777--09c538f5ef43ba1aebc8393295bbeafd.nii.gz/MD5E-s186777--09c538f5ef43ba1aebc8393295bbeafd.nii.gz

MaxMun_d/sub-0051357/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

MaxMun_d/sub-0051357/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7m/9g/MD5E-s246908--f2d6f068b38224d6feabd343e6e0bb62.nii.gz/MD5E-s246908--f2d6f068b38224d6feabd343e6e0bb62.nii.gz

MaxMun_d/sub-0051357/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

MaxMun_d/sub-0051357/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/QJ/fF/MD5E-s273980--509f8cda53c34fc7b298c6cedb834e67.nii.gz/MD5E-s273980--509f8cda53c34fc7b298c6cedb834e67.nii.gz

MaxMun_d/sub-0051357/mri/Tian_Subcortex_S2_7T_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

MaxMun_d/sub-0051357/mri/Tian_Subcortex_S2_7T_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/K5/07/MD5E-s21782--420f23bda471fd03fea79ece6f4db420.nii.gz/MD5E-s21782--420f23bda471fd03fea79ece6f4db420.nii.gz

MaxMun_d/sub-0051357/mri/aal3_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

MaxMun_d/sub-0051357/mri/aal3_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/j4/q0/MD5E-s190798--29d4e2cc13005fbc2c62ffa7fcb3c467.nii.gz/MD5E-s190798--29d4e2cc13005fbc2c62ffa7fcb3c467.nii.gz

MaxMun_d/sub-0051357/mri/anatomy3_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

MaxMun_d/sub-0051357/mri/anatomy3_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vx/GQ/MD5E-s132608--37b692dee1cc75de752fca310f735541.nii.gz/MD5E-s132608--37b692dee1cc75de752fca310f735541.nii.gz

MaxMun_d/sub-0051357/mri/anon_misub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/XK/9G/MD5E-s7735779--39b6b9b2d1bd8a847c3198b5352c772b.nii.gz/MD5E-s7735779--39b6b9b2d1bd8a847c3198b5352c772b.nii.gz

MaxMun_d/sub-0051357/mri/anon_msub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Fg/vJ/MD5E-s8537531--3fae8f31c68d1ee05843d4edbb457e45.nii.gz/MD5E-s8537531--3fae8f31c68d1ee05843d4edbb457e45.nii.gz

MaxMun_d/sub-0051357/mri/cat_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8K/f2/MD5E-s97956--38f441c416cbe5b0acb6588480bfc6f1.nii.gz/MD5E-s97956--38f441c416cbe5b0acb6588480bfc6f1.nii.gz

MaxMun_d/sub-0051357/mri/cobra_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

MaxMun_d/sub-0051357/mri/cobra_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/f1/WM/MD5E-s48703--a25966b63dd46bac8e077eb81477699d.nii.gz/MD5E-s48703--a25966b63dd46bac8e077eb81477699d.nii.gz

MaxMun_d/sub-0051357/mri/hammers_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

MaxMun_d/sub-0051357/mri/hammers_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/mq/z8/MD5E-s147433--b6d9aeb7e3ae5e9d5867bb457a0dbc09.nii.gz/MD5E-s147433--b6d9aeb7e3ae5e9d5867bb457a0dbc09.nii.gz

MaxMun_d/sub-0051357/mri/ibsr_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

MaxMun_d/sub-0051357/mri/ibsr_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/JQ/3Q/MD5E-s156368--ab55777f92c4d6cce3c403f853c36ee3.nii.gz/MD5E-s156368--ab55777f92c4d6cce3c403f853c36ee3.nii.gz

MaxMun_d/sub-0051357/mri/it_sub-0051357_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/jP/xQ/MD5E-s285--4868643b7649fb2bc329f55afb4e4d62.mat/MD5E-s285--4868643b7649fb2bc329f55afb4e4d62.mat

MaxMun_d/sub-0051357/mri/it_sub-0051357_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/k6/7G/MD5E-s283--1b719838a94605d99427af42de0080c2.mat/MD5E-s283--1b719838a94605d99427af42de0080c2.mat

MaxMun_d/sub-0051357/mri/iy_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/58/xW/MD5E-s42844205--9373cc370c306ec56505ccdd1d57a164.nii.gz/MD5E-s42844205--9373cc370c306ec56505ccdd1d57a164.nii.gz

MaxMun_d/sub-0051357/mri/julichbrain_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

MaxMun_d/sub-0051357/mri/julichbrain_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3P/FX/MD5E-s199650--81374ee08a8ec3c8765a2474670aa948.nii.gz/MD5E-s199650--81374ee08a8ec3c8765a2474670aa948.nii.gz

MaxMun_d/sub-0051357/mri/lpba40_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

MaxMun_d/sub-0051357/mri/lpba40_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1m/9w/MD5E-s145856--5d35554ba9f404c060edf3ca96c34f32.nii.gz/MD5E-s145856--5d35554ba9f404c060edf3ca96c34f32.nii.gz

MaxMun_d/sub-0051357/mri/m0wp1sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qQ/X6/MD5E-s2580364--c4f7c7880418440b7cf2fe4d1b346567.nii.gz/MD5E-s2580364--c4f7c7880418440b7cf2fe4d1b346567.nii.gz

MaxMun_d/sub-0051357/mri/m0wp2sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xq/qQ/MD5E-s2293964--e93fa85890278c15fd0ae154a75da246.nii.gz/MD5E-s2293964--e93fa85890278c15fd0ae154a75da246.nii.gz

MaxMun_d/sub-0051357/mri/m0wp3sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qF/9m/MD5E-s2434230--5a911f9b708665f4a6e817561fd277e5.nii.gz/MD5E-s2434230--5a911f9b708665f4a6e817561fd277e5.nii.gz

MaxMun_d/sub-0051357/mri/mori_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

MaxMun_d/sub-0051357/mri/mori_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/45/Jk/MD5E-s173386--5d997e84b3ef40746eb69e2666ceb23c.nii.gz/MD5E-s173386--5d997e84b3ef40746eb69e2666ceb23c.nii.gz

MaxMun_d/sub-0051357/mri/mwp1sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/F3/83/MD5E-s2582110--35eb205dc9034f105ca19ac087c2bff7.nii.gz/MD5E-s2582110--35eb205dc9034f105ca19ac087c2bff7.nii.gz

MaxMun_d/sub-0051357/mri/mwp2sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/76/Pj/MD5E-s2295043--efabc8582cf3af8c60fa0f3645c9ba08.nii.gz/MD5E-s2295043--efabc8582cf3af8c60fa0f3645c9ba08.nii.gz

MaxMun_d/sub-0051357/mri/mwp3sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pf/0K/MD5E-s2430705--ff58afddbfc2fc8323c6e8d66b8ed266.nii.gz/MD5E-s2430705--ff58afddbfc2fc8323c6e8d66b8ed266.nii.gz

MaxMun_d/sub-0051357/mri/neuromorphometrics_sub-0051357_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

MaxMun_d/sub-0051357/mri/neuromorphometrics_sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Fj/gM/MD5E-s202664--9597b797c393505d45da6971ec021bb5.nii.gz/MD5E-s202664--9597b797c393505d45da6971ec021bb5.nii.gz

MaxMun_d/sub-0051357/mri/p0sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pf/PQ/MD5E-s601042--43f4ff8c1bf5e18055c74f3c4b70d60f.nii.gz/MD5E-s601042--43f4ff8c1bf5e18055c74f3c4b70d60f.nii.gz

MaxMun_d/sub-0051357/mri/p1sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/85/GG/MD5E-s637492--80036dae66b1eb2a588461c7008cc236.nii.gz/MD5E-s637492--80036dae66b1eb2a588461c7008cc236.nii.gz

MaxMun_d/sub-0051357/mri/p2sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051357/mri/p3sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051357/mri/rp1sub-0051357_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gj/xF/MD5E-s453636--73f6ddf3413c3da0013ee5c44cc1afbe.nii.gz/MD5E-s453636--73f6ddf3413c3da0013ee5c44cc1afbe.nii.gz

MaxMun_d/sub-0051357/mri/rp2sub-0051357_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/zz/4W/MD5E-s313523--cb3764bf98d03ea37a02e348fbc793df.nii.gz/MD5E-s313523--cb3764bf98d03ea37a02e348fbc793df.nii.gz

MaxMun_d/sub-0051357/mri/rp3sub-0051357_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/V1/6K/MD5E-s258933--71fe0fa600b5ac5ad3602c4fe19efe6b.nii.gz/MD5E-s258933--71fe0fa600b5ac5ad3602c4fe19efe6b.nii.gz

MaxMun_d/sub-0051357/mri/t_sub-0051357_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Fw/41/MD5E-s284--a5f1649b33433ea297d582b4b8d726a8.mat/MD5E-s284--a5f1649b33433ea297d582b4b8d726a8.mat

MaxMun_d/sub-0051357/mri/t_sub-0051357_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/JV/wM/MD5E-s283--a082988d5604bcde282e2d1a949c01d7.mat/MD5E-s283--a082988d5604bcde282e2d1a949c01d7.mat

MaxMun_d/sub-0051357/mri/thalamus_sub-0051357_T1w.csv

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MaxMun_d/sub-0051357/mri/thalamus_sub-0051357_T1w.nii.gz

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MaxMun_d/sub-0051357/mri/wj_sub-0051357_T1w.nii.gz

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MaxMun_d/sub-0051357/mri/wmisub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051357/mri/wmsub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051357/mri/wp0sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/fQ/1X/MD5E-s499728--ab3324448eeee019ef6b319a6cdc2994.nii.gz/MD5E-s499728--ab3324448eeee019ef6b319a6cdc2994.nii.gz

MaxMun_d/sub-0051357/mri/wp1sub-0051357_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051357/mri/wp2sub-0051357_T1w.nii.gz

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MaxMun_d/sub-0051357/report/cat_sub-0051357_T1w.mat

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MaxMun_d/sub-0051357/report/catlog_sub-0051357_T1w.nii.txt

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MaxMun_d/sub-0051357/report/catreport_sub-0051357_T1w.pdf

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MaxMun_d/sub-0051357/report/catreportj_sub-0051357_T1w.jpg

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MaxMun_d/sub-0051357/surf/lh.area.sub-0051357_T1w

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MaxMun_d/sub-0051357/surf/s22.mesh.fractaldimension.resampled_32k.sub-0051357_T1w.dat

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