[DATALAD RUNCMD] Compute MaxMun_a/sub-0051363

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/MaxMun_a/sub-0051363/anat/sub-0051363_T1w.nii.gz"
 ],
 "outputs": [
  "MaxMun_a/sub-0051363"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

MaxMun_a/sub-0051363/label/catROI_sub-0051363_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/0F/zM/MD5E-s57915--736ae008bd0218f32814faefe5f1978f.mat/MD5E-s57915--736ae008bd0218f32814faefe5f1978f.mat

MaxMun_a/sub-0051363/label/catROI_sub-0051363_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/wG/KV/MD5E-s189099--a13649094fe6df5cf90a6bfe298d2704.xml/MD5E-s189099--a13649094fe6df5cf90a6bfe298d2704.xml

MaxMun_a/sub-0051363/label/catROIs_sub-0051363_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/MW/Jv/MD5E-s120233--5549d9bf0947d460c45850ff0f9bbd84.mat/MD5E-s120233--5549d9bf0947d460c45850ff0f9bbd84.mat

MaxMun_a/sub-0051363/label/catROIs_sub-0051363_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/Kw/MD5E-s332142--868f80355ded83879fe1e808cbd0f558.xml/MD5E-s332142--868f80355ded83879fe1e808cbd0f558.xml

MaxMun_a/sub-0051363/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

MaxMun_a/sub-0051363/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xj/xG/MD5E-s150476--4f6c93cea4f67155fffe925f0ed40f9e.nii.gz/MD5E-s150476--4f6c93cea4f67155fffe925f0ed40f9e.nii.gz

MaxMun_a/sub-0051363/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

MaxMun_a/sub-0051363/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/46/F5/MD5E-s169471--18587a8889dffb4d3105982c7c387195.nii.gz/MD5E-s169471--18587a8889dffb4d3105982c7c387195.nii.gz

MaxMun_a/sub-0051363/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

MaxMun_a/sub-0051363/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Qq/JZ/MD5E-s228765--aae4a9991bcb58e4c5892f952384124c.nii.gz/MD5E-s228765--aae4a9991bcb58e4c5892f952384124c.nii.gz

MaxMun_a/sub-0051363/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

MaxMun_a/sub-0051363/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/XF/3J/MD5E-s254822--fae9c122a6e3e54ba2afb0bf3e969663.nii.gz/MD5E-s254822--fae9c122a6e3e54ba2afb0bf3e969663.nii.gz

MaxMun_a/sub-0051363/mri/Tian_Subcortex_S2_7T_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

MaxMun_a/sub-0051363/mri/Tian_Subcortex_S2_7T_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/95/V5/MD5E-s21789--faaeeea96de9d167bc3fd5bf7bc4537c.nii.gz/MD5E-s21789--faaeeea96de9d167bc3fd5bf7bc4537c.nii.gz

MaxMun_a/sub-0051363/mri/aal3_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

MaxMun_a/sub-0051363/mri/aal3_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/WJ/Xk/MD5E-s172940--4f04436215770288a33622d66f9695f8.nii.gz/MD5E-s172940--4f04436215770288a33622d66f9695f8.nii.gz

MaxMun_a/sub-0051363/mri/anatomy3_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

MaxMun_a/sub-0051363/mri/anatomy3_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/zW/jX/MD5E-s122395--97139bdf74d1f96f15333ff65df2052e.nii.gz/MD5E-s122395--97139bdf74d1f96f15333ff65df2052e.nii.gz

MaxMun_a/sub-0051363/mri/anon_misub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7w/Z3/MD5E-s7972982--27ea0728f114a66ddcc8fad8d28951ef.nii.gz/MD5E-s7972982--27ea0728f114a66ddcc8fad8d28951ef.nii.gz

MaxMun_a/sub-0051363/mri/anon_msub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pZ/pJ/MD5E-s8320479--d4bf3687396ea15bd895ebbf2874a234.nii.gz/MD5E-s8320479--d4bf3687396ea15bd895ebbf2874a234.nii.gz

MaxMun_a/sub-0051363/mri/cat_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/vV/16/MD5E-s93762--b51b9fbf6fa6f3052e99fa3b02435616.nii.gz/MD5E-s93762--b51b9fbf6fa6f3052e99fa3b02435616.nii.gz

MaxMun_a/sub-0051363/mri/cobra_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

MaxMun_a/sub-0051363/mri/cobra_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4K/3q/MD5E-s44140--8e9c2676486049e044ce8935b9bb537c.nii.gz/MD5E-s44140--8e9c2676486049e044ce8935b9bb537c.nii.gz

MaxMun_a/sub-0051363/mri/hammers_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

MaxMun_a/sub-0051363/mri/hammers_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/KM/Zz/MD5E-s135701--4ad310b4da0182e5e443aa2f7469dc29.nii.gz/MD5E-s135701--4ad310b4da0182e5e443aa2f7469dc29.nii.gz

MaxMun_a/sub-0051363/mri/ibsr_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

MaxMun_a/sub-0051363/mri/ibsr_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/GM/3m/MD5E-s144079--b4c85a11f9612a346d38451d17155157.nii.gz/MD5E-s144079--b4c85a11f9612a346d38451d17155157.nii.gz

MaxMun_a/sub-0051363/mri/it_sub-0051363_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/m8/kF/MD5E-s284--b6a61c27c3fb5262ce34be4c973f6edb.mat/MD5E-s284--b6a61c27c3fb5262ce34be4c973f6edb.mat

MaxMun_a/sub-0051363/mri/it_sub-0051363_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mz/MF/MD5E-s284--8c3c6d429b67b64d8bb42a26238bfb85.mat/MD5E-s284--8c3c6d429b67b64d8bb42a26238bfb85.mat

MaxMun_a/sub-0051363/mri/iy_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/w5/48/MD5E-s41169879--fe67500384812831fca6116eaf517ff0.nii.gz/MD5E-s41169879--fe67500384812831fca6116eaf517ff0.nii.gz

MaxMun_a/sub-0051363/mri/julichbrain_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

MaxMun_a/sub-0051363/mri/julichbrain_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jz/Jg/MD5E-s181800--44b8706286ed845447b6668fd8ac21b0.nii.gz/MD5E-s181800--44b8706286ed845447b6668fd8ac21b0.nii.gz

MaxMun_a/sub-0051363/mri/lpba40_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

MaxMun_a/sub-0051363/mri/lpba40_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xX/Px/MD5E-s133773--9fa65374b158a868cda679044d5cddbb.nii.gz/MD5E-s133773--9fa65374b158a868cda679044d5cddbb.nii.gz

MaxMun_a/sub-0051363/mri/m0wp1sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/FK/MW/MD5E-s2579877--66647dbf328f39bc5ee68f1307ebe403.nii.gz/MD5E-s2579877--66647dbf328f39bc5ee68f1307ebe403.nii.gz

MaxMun_a/sub-0051363/mri/m0wp2sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0q/98/MD5E-s2310941--45872b44f90944278a77d593eb310659.nii.gz/MD5E-s2310941--45872b44f90944278a77d593eb310659.nii.gz

MaxMun_a/sub-0051363/mri/m0wp3sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/62/Q2/MD5E-s2555957--82b0b3f8464bb42bc3215a3666873b9f.nii.gz/MD5E-s2555957--82b0b3f8464bb42bc3215a3666873b9f.nii.gz

MaxMun_a/sub-0051363/mri/mori_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

MaxMun_a/sub-0051363/mri/mori_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Qg/w7/MD5E-s160578--7301fd6e60d52e85e7465fcb4bc7f42b.nii.gz/MD5E-s160578--7301fd6e60d52e85e7465fcb4bc7f42b.nii.gz

MaxMun_a/sub-0051363/mri/mwp1sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7P/MG/MD5E-s2586817--6c08d59e1498aa18a091a979233af41d.nii.gz/MD5E-s2586817--6c08d59e1498aa18a091a979233af41d.nii.gz

MaxMun_a/sub-0051363/mri/mwp2sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/24/9G/MD5E-s2312558--ecf0141ffc1cf556e9e01777904f2dd4.nii.gz/MD5E-s2312558--ecf0141ffc1cf556e9e01777904f2dd4.nii.gz

MaxMun_a/sub-0051363/mri/mwp3sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/kQ/8M/MD5E-s2553130--52551d5b73c8adff2573d4b737627b11.nii.gz/MD5E-s2553130--52551d5b73c8adff2573d4b737627b11.nii.gz

MaxMun_a/sub-0051363/mri/neuromorphometrics_sub-0051363_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

MaxMun_a/sub-0051363/mri/neuromorphometrics_sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/FQ/Gx/MD5E-s183385--36215de93fa7268195869cc18242af35.nii.gz/MD5E-s183385--36215de93fa7268195869cc18242af35.nii.gz

MaxMun_a/sub-0051363/mri/p0sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/j4/V0/MD5E-s577106--d74bbb0f094e6dc90b2033c489ef1502.nii.gz/MD5E-s577106--d74bbb0f094e6dc90b2033c489ef1502.nii.gz

MaxMun_a/sub-0051363/mri/p1sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/87/qP/MD5E-s610661--c640e2c9c820cbb0326fbcda9d5b46d8.nii.gz/MD5E-s610661--c640e2c9c820cbb0326fbcda9d5b46d8.nii.gz

MaxMun_a/sub-0051363/mri/p2sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xj/kM/MD5E-s396166--78139c3dcba06a8a44fc924a034e271d.nii.gz/MD5E-s396166--78139c3dcba06a8a44fc924a034e271d.nii.gz

MaxMun_a/sub-0051363/mri/p3sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0p/0x/MD5E-s357647--106a4f85b60c753f5450fe137a352b8e.nii.gz/MD5E-s357647--106a4f85b60c753f5450fe137a352b8e.nii.gz

MaxMun_a/sub-0051363/mri/rp1sub-0051363_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/GJ/qm/MD5E-s441595--c155c26898132bf67f9b75b97190ac43.nii.gz/MD5E-s441595--c155c26898132bf67f9b75b97190ac43.nii.gz

MaxMun_a/sub-0051363/mri/rp2sub-0051363_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/64/Pf/MD5E-s301460--8c2c2178e8f1b3f571a30698517999c7.nii.gz/MD5E-s301460--8c2c2178e8f1b3f571a30698517999c7.nii.gz

MaxMun_a/sub-0051363/mri/rp3sub-0051363_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/94/5Z/MD5E-s294884--c303031a8291d00fe8e12671673c9089.nii.gz/MD5E-s294884--c303031a8291d00fe8e12671673c9089.nii.gz

MaxMun_a/sub-0051363/mri/t_sub-0051363_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/39/6g/MD5E-s283--cf4b71848736224e872d35c48c924fdd.mat/MD5E-s283--cf4b71848736224e872d35c48c924fdd.mat

MaxMun_a/sub-0051363/mri/t_sub-0051363_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/ZP/2J/MD5E-s284--3fc21661b5d5c217137b2b86fef5036a.mat/MD5E-s284--3fc21661b5d5c217137b2b86fef5036a.mat

MaxMun_a/sub-0051363/mri/thalamus_sub-0051363_T1w.csv

@@ -0,0 +1 @@
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MaxMun_a/sub-0051363/mri/thalamus_sub-0051363_T1w.nii.gz

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MaxMun_a/sub-0051363/mri/wj_sub-0051363_T1w.nii.gz

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MaxMun_a/sub-0051363/mri/wmisub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051363/mri/wmsub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051363/mri/wp0sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Fz/Wz/MD5E-s517051--dfe00da670328b0194f7a33385596a1e.nii.gz/MD5E-s517051--dfe00da670328b0194f7a33385596a1e.nii.gz

MaxMun_a/sub-0051363/mri/wp1sub-0051363_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051363/mri/wp2sub-0051363_T1w.nii.gz

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