[DATALAD RUNCMD] Compute Leuven_2/sub-0050745

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/Leuven_2/sub-0050745/anat/sub-0050745_T1w.nii.gz"
 ],
 "outputs": [
  "Leuven_2/sub-0050745"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

Leuven_2/sub-0050745/label/catROI_sub-0050745_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mv/MG/MD5E-s61281--0c1ba4ed9b971e0a62105550ae80a52b.mat/MD5E-s61281--0c1ba4ed9b971e0a62105550ae80a52b.mat

Leuven_2/sub-0050745/label/catROI_sub-0050745_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/v5/5M/MD5E-s188849--cddeec56022e9065de47e3501ab8a9fe.xml/MD5E-s188849--cddeec56022e9065de47e3501ab8a9fe.xml

Leuven_2/sub-0050745/label/catROIs_sub-0050745_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/53/k4/MD5E-s120063--6c58768f0affee4b50701640b28c5537.mat/MD5E-s120063--6c58768f0affee4b50701640b28c5537.mat

Leuven_2/sub-0050745/label/catROIs_sub-0050745_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/6x/m3/MD5E-s332118--da559e3a4bb47aa488e98aae680b852d.xml/MD5E-s332118--da559e3a4bb47aa488e98aae680b852d.xml

Leuven_2/sub-0050745/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050745_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

Leuven_2/sub-0050745/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/XF/0V/MD5E-s172481--10fb20158aefae21e97d9ce18fc5ebaf.nii.gz/MD5E-s172481--10fb20158aefae21e97d9ce18fc5ebaf.nii.gz

Leuven_2/sub-0050745/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050745_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

Leuven_2/sub-0050745/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jJ/FZ/MD5E-s192318--544417808c7391949de33321b4d19121.nii.gz/MD5E-s192318--544417808c7391949de33321b4d19121.nii.gz

Leuven_2/sub-0050745/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050745_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

Leuven_2/sub-0050745/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/J0/FF/MD5E-s246739--3bfb20bba73a136fd033ddf5087832b5.nii.gz/MD5E-s246739--3bfb20bba73a136fd033ddf5087832b5.nii.gz

Leuven_2/sub-0050745/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050745_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

Leuven_2/sub-0050745/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/v4/Jw/MD5E-s274389--7a3e78f2782b3faf161e0eb3d4680579.nii.gz/MD5E-s274389--7a3e78f2782b3faf161e0eb3d4680579.nii.gz

Leuven_2/sub-0050745/mri/Tian_Subcortex_S2_7T_sub-0050745_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

Leuven_2/sub-0050745/mri/Tian_Subcortex_S2_7T_sub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/2g/P9/MD5E-s25704--3e56f0707403740e00ebefcbdd953bf0.nii.gz/MD5E-s25704--3e56f0707403740e00ebefcbdd953bf0.nii.gz

Leuven_2/sub-0050745/mri/aal3_sub-0050745_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

Leuven_2/sub-0050745/mri/aal3_sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/anatomy3_sub-0050745_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

Leuven_2/sub-0050745/mri/anatomy3_sub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050745/mri/anon_misub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/px/54/MD5E-s4556672--a3c6fda03cbc41098f48cbd983e0f7cb.nii.gz/MD5E-s4556672--a3c6fda03cbc41098f48cbd983e0f7cb.nii.gz

Leuven_2/sub-0050745/mri/anon_msub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/mK/Wj/MD5E-s11287744--0e05be9491460812e9473a7e396c9ca4.nii.gz/MD5E-s11287744--0e05be9491460812e9473a7e396c9ca4.nii.gz

Leuven_2/sub-0050745/mri/cat_sub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/V1/WQ/MD5E-s101856--59dc219f69b808971984b692fca71519.nii.gz/MD5E-s101856--59dc219f69b808971984b692fca71519.nii.gz

Leuven_2/sub-0050745/mri/cobra_sub-0050745_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

Leuven_2/sub-0050745/mri/cobra_sub-0050745_T1w.nii.gz

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+../../../.git/annex/objects/p3/Q3/MD5E-s48520--2b1d2cd26a3fdd6e3de71ba0d27dd92b.nii.gz/MD5E-s48520--2b1d2cd26a3fdd6e3de71ba0d27dd92b.nii.gz

Leuven_2/sub-0050745/mri/hammers_sub-0050745_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

Leuven_2/sub-0050745/mri/hammers_sub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050745/mri/ibsr_sub-0050745_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

Leuven_2/sub-0050745/mri/ibsr_sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/it_sub-0050745_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/M1/gw/MD5E-s283--4bc46c164fe411ca72b6f80cc4f5f2f8.mat/MD5E-s283--4bc46c164fe411ca72b6f80cc4f5f2f8.mat

Leuven_2/sub-0050745/mri/it_sub-0050745_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/4K/g3/MD5E-s283--c8ad360729de0787d7e23a511c7f1048.mat/MD5E-s283--c8ad360729de0787d7e23a511c7f1048.mat

Leuven_2/sub-0050745/mri/iy_sub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/2w/fp/MD5E-s38443981--133259fd1ee4307e99f551cf821b70dd.nii.gz/MD5E-s38443981--133259fd1ee4307e99f551cf821b70dd.nii.gz

Leuven_2/sub-0050745/mri/julichbrain_sub-0050745_T1w.csv

@@ -0,0 +1 @@
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Leuven_2/sub-0050745/mri/julichbrain_sub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6p/3g/MD5E-s204326--8c5953ec7a61149131c888091bcfa77b.nii.gz/MD5E-s204326--8c5953ec7a61149131c888091bcfa77b.nii.gz

Leuven_2/sub-0050745/mri/lpba40_sub-0050745_T1w.csv

@@ -0,0 +1 @@
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Leuven_2/sub-0050745/mri/lpba40_sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/m0wp1sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/m0wp2sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/m0wp3sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/mori_sub-0050745_T1w.csv

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Leuven_2/sub-0050745/mri/mori_sub-0050745_T1w.nii.gz

@@ -0,0 +1 @@
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Leuven_2/sub-0050745/mri/mwp1sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/mwp2sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/mwp3sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/neuromorphometrics_sub-0050745_T1w.csv

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Leuven_2/sub-0050745/mri/neuromorphometrics_sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/p0sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/p1sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/p2sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/p3sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/rp1sub-0050745_T1w_affine.nii.gz

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Leuven_2/sub-0050745/mri/rp2sub-0050745_T1w_affine.nii.gz

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Leuven_2/sub-0050745/mri/rp3sub-0050745_T1w_affine.nii.gz

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Leuven_2/sub-0050745/mri/t_sub-0050745_T1w_affine_reorient.mat

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Leuven_2/sub-0050745/mri/t_sub-0050745_T1w_rigid_reorient.mat

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Leuven_2/sub-0050745/mri/thalamus_sub-0050745_T1w.csv

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Leuven_2/sub-0050745/mri/thalamus_sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/wj_sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/wmisub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/wmsub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/wp0sub-0050745_T1w.nii.gz

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Leuven_2/sub-0050745/mri/wp1sub-0050745_T1w.nii.gz

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