[DATALAD RUNCMD] Compute KKI/sub-0050793

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/KKI/sub-0050793/anat/sub-0050793_T1w.nii.gz"
 ],
 "outputs": [
  "KKI/sub-0050793"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

KKI/sub-0050793/label/catROI_sub-0050793_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/4Q/F1/MD5E-s61371--3b1c7cad51c2e1169c9d89f5d14b68d0.mat/MD5E-s61371--3b1c7cad51c2e1169c9d89f5d14b68d0.mat

KKI/sub-0050793/label/catROI_sub-0050793_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/gX/3X/MD5E-s188995--e01b996bb82852273632003f9ca46db8.xml/MD5E-s188995--e01b996bb82852273632003f9ca46db8.xml

KKI/sub-0050793/label/catROIs_sub-0050793_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Fv/Gk/MD5E-s120165--70c9a7ba66726aaf4705e90b413e67a8.mat/MD5E-s120165--70c9a7ba66726aaf4705e90b413e67a8.mat

KKI/sub-0050793/label/catROIs_sub-0050793_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/gV/q6/MD5E-s332160--ecea9fae8b5ad4038402104c34058a7c.xml/MD5E-s332160--ecea9fae8b5ad4038402104c34058a7c.xml

KKI/sub-0050793/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

KKI/sub-0050793/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/gQ/MD5E-s186101--5acb4054d0670e8996620ec1b6c62362.nii.gz/MD5E-s186101--5acb4054d0670e8996620ec1b6c62362.nii.gz

KKI/sub-0050793/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

KKI/sub-0050793/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/2M/2p/MD5E-s208386--ec8dfaf0b44475fcae2985ff282f5841.nii.gz/MD5E-s208386--ec8dfaf0b44475fcae2985ff282f5841.nii.gz

KKI/sub-0050793/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

KKI/sub-0050793/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qK/j2/MD5E-s267302--761140dc8c3ac2f9924ed7b06ec39e72.nii.gz/MD5E-s267302--761140dc8c3ac2f9924ed7b06ec39e72.nii.gz

KKI/sub-0050793/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

KKI/sub-0050793/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Gz/Px/MD5E-s298153--fc5af93dbacb04fed66c3fb6383ae675.nii.gz/MD5E-s298153--fc5af93dbacb04fed66c3fb6383ae675.nii.gz

KKI/sub-0050793/mri/Tian_Subcortex_S2_7T_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

KKI/sub-0050793/mri/Tian_Subcortex_S2_7T_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/zp/z4/MD5E-s26827--ccca3040e0b2aa59713f382aa34725e0.nii.gz/MD5E-s26827--ccca3040e0b2aa59713f382aa34725e0.nii.gz

KKI/sub-0050793/mri/aal3_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

KKI/sub-0050793/mri/aal3_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/01/48/MD5E-s209316--ddf0ae831ba82627e7ee9327fb8df48b.nii.gz/MD5E-s209316--ddf0ae831ba82627e7ee9327fb8df48b.nii.gz

KKI/sub-0050793/mri/anatomy3_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

KKI/sub-0050793/mri/anatomy3_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/QK/4F/MD5E-s152502--e2c188b415238e4a64daa7122b901e27.nii.gz/MD5E-s152502--e2c188b415238e4a64daa7122b901e27.nii.gz

KKI/sub-0050793/mri/anon_misub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6Q/mJ/MD5E-s4213538--d34a14b539d33680ced518105d9650c5.nii.gz/MD5E-s4213538--d34a14b539d33680ced518105d9650c5.nii.gz

KKI/sub-0050793/mri/anon_msub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9k/P2/MD5E-s12008108--da812cd6d00ba5f94703e1e9288b0a06.nii.gz/MD5E-s12008108--da812cd6d00ba5f94703e1e9288b0a06.nii.gz

KKI/sub-0050793/mri/cat_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xj/G4/MD5E-s109070--f5fba1975ae47b830f2990f4d5f1e794.nii.gz/MD5E-s109070--f5fba1975ae47b830f2990f4d5f1e794.nii.gz

KKI/sub-0050793/mri/cobra_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

KKI/sub-0050793/mri/cobra_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/28/K5/MD5E-s52204--97768eb3d02166d97ff5188c43fb0ec1.nii.gz/MD5E-s52204--97768eb3d02166d97ff5188c43fb0ec1.nii.gz

KKI/sub-0050793/mri/hammers_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

KKI/sub-0050793/mri/hammers_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1G/W9/MD5E-s162620--42c24adeb55ba10d3403be38242e321c.nii.gz/MD5E-s162620--42c24adeb55ba10d3403be38242e321c.nii.gz

KKI/sub-0050793/mri/ibsr_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

KKI/sub-0050793/mri/ibsr_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4Q/M9/MD5E-s166946--23eb941c4ae97278610614cee7b3f252.nii.gz/MD5E-s166946--23eb941c4ae97278610614cee7b3f252.nii.gz

KKI/sub-0050793/mri/it_sub-0050793_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/59/MZ/MD5E-s283--b0b5473702909c351c1ad885ecfd1d1f.mat/MD5E-s283--b0b5473702909c351c1ad885ecfd1d1f.mat

KKI/sub-0050793/mri/it_sub-0050793_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/3P/3v/MD5E-s283--eb51faac47a3d5349083407e8321fee1.mat/MD5E-s283--eb51faac47a3d5349083407e8321fee1.mat

KKI/sub-0050793/mri/iy_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xp/KF/MD5E-s43475029--2cd8fbe4491ce7ec78079a97e9cb949e.nii.gz/MD5E-s43475029--2cd8fbe4491ce7ec78079a97e9cb949e.nii.gz

KKI/sub-0050793/mri/julichbrain_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

KKI/sub-0050793/mri/julichbrain_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xm/WX/MD5E-s221998--30fc16a04e5e4b028f72b802f6fdb0ce.nii.gz/MD5E-s221998--30fc16a04e5e4b028f72b802f6fdb0ce.nii.gz

KKI/sub-0050793/mri/lpba40_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

KKI/sub-0050793/mri/lpba40_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/wW/zm/MD5E-s160553--e2fcfaf657852151f4b5a097fb0457d9.nii.gz/MD5E-s160553--e2fcfaf657852151f4b5a097fb0457d9.nii.gz

KKI/sub-0050793/mri/m0wp1sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4G/J6/MD5E-s2619629--2d6dea2cccb48661c514ca5f5918657b.nii.gz/MD5E-s2619629--2d6dea2cccb48661c514ca5f5918657b.nii.gz

KKI/sub-0050793/mri/m0wp2sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8W/pF/MD5E-s2347185--ec5bd28ffcc7274467c4afaba7d63ed0.nii.gz/MD5E-s2347185--ec5bd28ffcc7274467c4afaba7d63ed0.nii.gz

KKI/sub-0050793/mri/m0wp3sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gv/PG/MD5E-s2595369--3f08347805be18797256c3024e0df5d5.nii.gz/MD5E-s2595369--3f08347805be18797256c3024e0df5d5.nii.gz

KKI/sub-0050793/mri/mori_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

KKI/sub-0050793/mri/mori_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050793/mri/mwp1sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/P1/jJ/MD5E-s2625668--2c172a2ea37e9f2fcef080cf9686f95e.nii.gz/MD5E-s2625668--2c172a2ea37e9f2fcef080cf9686f95e.nii.gz

KKI/sub-0050793/mri/mwp2sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050793/mri/mwp3sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/q2/5F/MD5E-s2595222--dfda93b411d6ac1c6ff7a4d55aa72e51.nii.gz/MD5E-s2595222--dfda93b411d6ac1c6ff7a4d55aa72e51.nii.gz

KKI/sub-0050793/mri/neuromorphometrics_sub-0050793_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

KKI/sub-0050793/mri/neuromorphometrics_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/wk/4z/MD5E-s218492--39f7fae37bce8ae4cbb9b202364c7890.nii.gz/MD5E-s218492--39f7fae37bce8ae4cbb9b202364c7890.nii.gz

KKI/sub-0050793/mri/p0sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/f5/JV/MD5E-s644683--7733923df04d6e7e2be79e0a1e6ae56e.nii.gz/MD5E-s644683--7733923df04d6e7e2be79e0a1e6ae56e.nii.gz

KKI/sub-0050793/mri/p1sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/5f/x6/MD5E-s688781--4b30444f49031e6de32950acf8850174.nii.gz/MD5E-s688781--4b30444f49031e6de32950acf8850174.nii.gz

KKI/sub-0050793/mri/p2sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050793/mri/p3sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/KQ/zZ/MD5E-s391007--5deec24ae4811f4eb76e8a284ede2231.nii.gz/MD5E-s391007--5deec24ae4811f4eb76e8a284ede2231.nii.gz

KKI/sub-0050793/mri/rp1sub-0050793_T1w_affine.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050793/mri/rp2sub-0050793_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/MZ/xm/MD5E-s313010--9e5f935cc55efd28726742e269083303.nii.gz/MD5E-s313010--9e5f935cc55efd28726742e269083303.nii.gz

KKI/sub-0050793/mri/rp3sub-0050793_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/w3/QK/MD5E-s304615--c972159f5a67a8772922b2afca72f119.nii.gz/MD5E-s304615--c972159f5a67a8772922b2afca72f119.nii.gz

KKI/sub-0050793/mri/t_sub-0050793_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/q0/ww/MD5E-s283--78130bd2cf7dd76c1f258369e5c33d6d.mat/MD5E-s283--78130bd2cf7dd76c1f258369e5c33d6d.mat

KKI/sub-0050793/mri/t_sub-0050793_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pm/85/MD5E-s284--ad8eabf16a9b2e1609b79e49691c923f.mat/MD5E-s284--ad8eabf16a9b2e1609b79e49691c923f.mat

KKI/sub-0050793/mri/thalamus_sub-0050793_T1w.csv

@@ -0,0 +1 @@
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KKI/sub-0050793/mri/thalamus_sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050793/mri/wj_sub-0050793_T1w.nii.gz

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KKI/sub-0050793/mri/wmisub-0050793_T1w.nii.gz

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KKI/sub-0050793/mri/wmsub-0050793_T1w.nii.gz

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KKI/sub-0050793/mri/wp0sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050793/mri/wp1sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050793/mri/wp2sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050793/mri/wp3sub-0050793_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050793/mri/y_sub-0050793_T1w.nii.gz

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