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ABIDE_cat12.8.1
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[DATALAD RUNCMD] Compute USM/sub-0050475

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/USM/sub-0050475/anat/sub-0050475_T1w.nii.gz"
 ],
 "outputs": [
  "USM/sub-0050475"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^
Felix Hoffstaedter před 6 měsíci
rodič
8c4b7e5e26
revize
9e9b9dd41e
100 změnil soubory, kde provedl 99 přidání a 0 odebrání
Rozdělené zobrazení Ukázat statistiku rozdílových dat
  1. 1 0
      USM/sub-0050475/label/catROI_sub-0050475_T1w.mat
  2. 1 0
      USM/sub-0050475/label/catROI_sub-0050475_T1w.xml
  3. 1 0
      USM/sub-0050475/label/catROIs_sub-0050475_T1w.mat
  4. 1 0
      USM/sub-0050475/label/catROIs_sub-0050475_T1w.xml
  5. 1 0
      USM/sub-0050475/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050475_T1w.csv
  6. 1 0
      USM/sub-0050475/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050475_T1w.nii.gz
  7. 1 0
      USM/sub-0050475/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050475_T1w.csv
  8. 1 0
      USM/sub-0050475/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050475_T1w.nii.gz
  9. 1 0
      USM/sub-0050475/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050475_T1w.csv
  10. 1 0
      USM/sub-0050475/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050475_T1w.nii.gz
  11. 1 0
      USM/sub-0050475/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050475_T1w.csv
  12. 1 0
      USM/sub-0050475/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050475_T1w.nii.gz
  13. 1 0
      USM/sub-0050475/mri/Tian_Subcortex_S2_7T_sub-0050475_T1w.csv
  14. 1 0
      USM/sub-0050475/mri/Tian_Subcortex_S2_7T_sub-0050475_T1w.nii.gz
  15. 1 0
      USM/sub-0050475/mri/aal3_sub-0050475_T1w.csv
  16. 1 0
      USM/sub-0050475/mri/aal3_sub-0050475_T1w.nii.gz
  17. 1 0
      USM/sub-0050475/mri/anatomy3_sub-0050475_T1w.csv
  18. 1 0
      USM/sub-0050475/mri/anatomy3_sub-0050475_T1w.nii.gz
  19. 1 0
      USM/sub-0050475/mri/anon_misub-0050475_T1w.nii.gz
  20. 1 0
      USM/sub-0050475/mri/anon_msub-0050475_T1w.nii.gz
  21. 1 0
      USM/sub-0050475/mri/cat_sub-0050475_T1w.nii.gz
  22. 1 0
      USM/sub-0050475/mri/cobra_sub-0050475_T1w.csv
  23. 1 0
      USM/sub-0050475/mri/cobra_sub-0050475_T1w.nii.gz
  24. 1 0
      USM/sub-0050475/mri/hammers_sub-0050475_T1w.csv
  25. 1 0
      USM/sub-0050475/mri/hammers_sub-0050475_T1w.nii.gz
  26. 1 0
      USM/sub-0050475/mri/ibsr_sub-0050475_T1w.csv
  27. 1 0
      USM/sub-0050475/mri/ibsr_sub-0050475_T1w.nii.gz
  28. 1 0
      USM/sub-0050475/mri/it_sub-0050475_T1w_affine_reorient.mat
  29. 1 0
      USM/sub-0050475/mri/it_sub-0050475_T1w_rigid_reorient.mat
  30. 1 0
      USM/sub-0050475/mri/iy_sub-0050475_T1w.nii.gz
  31. 1 0
      USM/sub-0050475/mri/julichbrain_sub-0050475_T1w.csv
  32. 1 0
      USM/sub-0050475/mri/julichbrain_sub-0050475_T1w.nii.gz
  33. 1 0
      USM/sub-0050475/mri/lpba40_sub-0050475_T1w.csv
  34. 1 0
      USM/sub-0050475/mri/lpba40_sub-0050475_T1w.nii.gz
  35. 1 0
      USM/sub-0050475/mri/m0wp1sub-0050475_T1w.nii.gz
  36. 1 0
      USM/sub-0050475/mri/m0wp2sub-0050475_T1w.nii.gz
  37. 1 0
      USM/sub-0050475/mri/m0wp3sub-0050475_T1w.nii.gz
  38. 1 0
      USM/sub-0050475/mri/mori_sub-0050475_T1w.csv
  39. 1 0
      USM/sub-0050475/mri/mori_sub-0050475_T1w.nii.gz
  40. 1 0
      USM/sub-0050475/mri/mwp1sub-0050475_T1w.nii.gz
  41. 1 0
      USM/sub-0050475/mri/mwp2sub-0050475_T1w.nii.gz
  42. 1 0
      USM/sub-0050475/mri/mwp3sub-0050475_T1w.nii.gz
  43. 1 0
      USM/sub-0050475/mri/neuromorphometrics_sub-0050475_T1w.csv
  44. 1 0
      USM/sub-0050475/mri/neuromorphometrics_sub-0050475_T1w.nii.gz
  45. 1 0
      USM/sub-0050475/mri/p0sub-0050475_T1w.nii.gz
  46. 1 0
      USM/sub-0050475/mri/p1sub-0050475_T1w.nii.gz
  47. 1 0
      USM/sub-0050475/mri/p2sub-0050475_T1w.nii.gz
  48. 1 0
      USM/sub-0050475/mri/p3sub-0050475_T1w.nii.gz
  49. 1 0
      USM/sub-0050475/mri/rp1sub-0050475_T1w_affine.nii.gz
  50. 1 0
      USM/sub-0050475/mri/rp2sub-0050475_T1w_affine.nii.gz
  51. 1 0
      USM/sub-0050475/mri/rp3sub-0050475_T1w_affine.nii.gz
  52. 1 0
      USM/sub-0050475/mri/t_sub-0050475_T1w_affine_reorient.mat
  53. 1 0
      USM/sub-0050475/mri/t_sub-0050475_T1w_rigid_reorient.mat
  54. 1 0
      USM/sub-0050475/mri/thalamus_sub-0050475_T1w.csv
  55. 1 0
      USM/sub-0050475/mri/thalamus_sub-0050475_T1w.nii.gz
  56. 1 0
      USM/sub-0050475/mri/wj_sub-0050475_T1w.nii.gz
  57. 1 0
      USM/sub-0050475/mri/wmisub-0050475_T1w.nii.gz
  58. 1 0
      USM/sub-0050475/mri/wmsub-0050475_T1w.nii.gz
  59. 1 0
      USM/sub-0050475/mri/wp0sub-0050475_T1w.nii.gz
  60. 1 0
      USM/sub-0050475/mri/wp1sub-0050475_T1w.nii.gz
  61. 1 0
      USM/sub-0050475/mri/wp2sub-0050475_T1w.nii.gz
  62. 1 0
      USM/sub-0050475/mri/wp3sub-0050475_T1w.nii.gz
  63. 1 0
      USM/sub-0050475/mri/y_sub-0050475_T1w.nii.gz
  64. 1 0
      USM/sub-0050475/report/cat_sub-0050475_T1w.mat
  65. 1 0
      USM/sub-0050475/report/cat_sub-0050475_T1w.xml
  66. 1 0
      USM/sub-0050475/report/catlog_sub-0050475_T1w.nii.txt
  67. 1 0
      USM/sub-0050475/report/catreport_sub-0050475_T1w.pdf
  68. 1 0
      USM/sub-0050475/report/catreportj_sub-0050475_T1w.jpg
  69. 1 0
      USM/sub-0050475/surf/lh.area.sub-0050475_T1w
  70. 1 0
      USM/sub-0050475/surf/lh.central.sub-0050475_T1w.gii
  71. 1 0
      USM/sub-0050475/surf/lh.depth.sub-0050475_T1w
  72. 1 0
      USM/sub-0050475/surf/lh.edgemap32k.sub-0050475_T1w.mat
  73. 1 0
      USM/sub-0050475/surf/lh.fractaldimension.sub-0050475_T1w
  74. 1 0
      USM/sub-0050475/surf/lh.gmv.sub-0050475_T1w
  75. 1 0
      USM/sub-0050475/surf/lh.gyrification.sub-0050475_T1w
  76. 1 0
      USM/sub-0050475/surf/lh.pbt.sub-0050475_T1w
  77. 1 0
      USM/sub-0050475/surf/lh.sphere.reg.sub-0050475_T1w.gii
  78. 1 0
      USM/sub-0050475/surf/lh.sphere.sub-0050475_T1w.gii
  79. 1 0
      USM/sub-0050475/surf/lh.thickness.sub-0050475_T1w
  80. 1 0
      USM/sub-0050475/surf/lh.toroGI20mm.sub-0050475_T1w
  81. 1 0
      USM/sub-0050475/surf/rh.area.sub-0050475_T1w
  82. 1 0
      USM/sub-0050475/surf/rh.central.sub-0050475_T1w.gii
  83. 1 0
      USM/sub-0050475/surf/rh.depth.sub-0050475_T1w
  84. 1 0
      USM/sub-0050475/surf/rh.edgemap32k.sub-0050475_T1w.mat
  85. 1 0
      USM/sub-0050475/surf/rh.fractaldimension.sub-0050475_T1w
  86. 1 0
      USM/sub-0050475/surf/rh.gmv.sub-0050475_T1w
  87. 1 0
      USM/sub-0050475/surf/rh.gyrification.sub-0050475_T1w
  88. 1 0
      USM/sub-0050475/surf/rh.pbt.sub-0050475_T1w
  89. 1 0
      USM/sub-0050475/surf/rh.sphere.reg.sub-0050475_T1w.gii
  90. 1 0
      USM/sub-0050475/surf/rh.sphere.sub-0050475_T1w.gii
  91. 1 0
      USM/sub-0050475/surf/rh.thickness.sub-0050475_T1w
  92. 1 0
      USM/sub-0050475/surf/rh.toroGI20mm.sub-0050475_T1w
  93. 1 0
      USM/sub-0050475/surf/s12.mesh.thickness.resampled_32k.sub-0050475_T1w.dat
  94. 1 0
      USM/sub-0050475/surf/s12.mesh.thickness.resampled_32k.sub-0050475_T1w.gii
  95. 1 0
      USM/sub-0050475/surf/s22.mesh.area.resampled_32k.sub-0050475_T1w.dat
  96. 1 0
      USM/sub-0050475/surf/s22.mesh.area.resampled_32k.sub-0050475_T1w.gii
  97. 1 0
      USM/sub-0050475/surf/s22.mesh.depth.resampled_32k.sub-0050475_T1w.dat
  98. 1 0
      USM/sub-0050475/surf/s22.mesh.depth.resampled_32k.sub-0050475_T1w.gii
  99. 1 0
      USM/sub-0050475/surf/s22.mesh.fractaldimension.resampled_32k.sub-0050475_T1w.dat
  100. 0 0
      USM/sub-0050475/surf/s22.mesh.fractaldimension.resampled_32k.sub-0050475_T1w.gii

+ 1 - 0
USM/sub-0050475/label/catROI_sub-0050475_T1w.mat
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/x5/v7/MD5E-s61443--3eb626615473a7e7abeb3a374e338f17.mat/MD5E-s61443--3eb626615473a7e7abeb3a374e338f17.mat

+ 1 - 0
USM/sub-0050475/label/catROI_sub-0050475_T1w.xml
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/FW/7V/MD5E-s189094--f513403858c6f17adf75c40cabea1390.xml/MD5E-s189094--f513403858c6f17adf75c40cabea1390.xml

+ 1 - 0
USM/sub-0050475/label/catROIs_sub-0050475_T1w.mat
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/k6/97/MD5E-s120011--9d001405ec55383c2daca145a8fd3260.mat/MD5E-s120011--9d001405ec55383c2daca145a8fd3260.mat

+ 1 - 0
USM/sub-0050475/label/catROIs_sub-0050475_T1w.xml
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/76/QJ/MD5E-s332158--5ebb7ebecb2cc9636edb0638a44d3d47.xml/MD5E-s332158--5ebb7ebecb2cc9636edb0638a44d3d47.xml

+ 1 - 0
USM/sub-0050475/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050475_T1w.csv
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

+ 1 - 0
USM/sub-0050475/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050475_T1w.nii.gz
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/xF/79/MD5E-s481350--9884821801e4571e5d245964e1bebd1f.nii.gz/MD5E-s481350--9884821801e4571e5d245964e1bebd1f.nii.gz

+ 1 - 0
USM/sub-0050475/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050475_T1w.csv
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

+ 1 - 0
USM/sub-0050475/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050475_T1w.nii.gz
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/mx/Jg/MD5E-s536655--a9003c38343a36d2b1cbdfb6d007716d.nii.gz/MD5E-s536655--a9003c38343a36d2b1cbdfb6d007716d.nii.gz

+ 1 - 0
USM/sub-0050475/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050475_T1w.csv
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

+ 1 - 0
USM/sub-0050475/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050475_T1w.nii.gz
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/4K/7K/MD5E-s753184--deec04a82f2497eb8e5d13acbef3a21f.nii.gz/MD5E-s753184--deec04a82f2497eb8e5d13acbef3a21f.nii.gz

+ 1 - 0
USM/sub-0050475/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050475_T1w.csv
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

+ 1 - 0
USM/sub-0050475/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050475_T1w.nii.gz
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/G0/9J/MD5E-s830329--444a4882f3e1d9cd30ccb5c243013507.nii.gz/MD5E-s830329--444a4882f3e1d9cd30ccb5c243013507.nii.gz

+ 1 - 0
USM/sub-0050475/mri/Tian_Subcortex_S2_7T_sub-0050475_T1w.csv
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

+ 1 - 0
USM/sub-0050475/mri/Tian_Subcortex_S2_7T_sub-0050475_T1w.nii.gz
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/xG/fK/MD5E-s74326--8d0cb2a631e99f101d3add6d2b7fc7c7.nii.gz/MD5E-s74326--8d0cb2a631e99f101d3add6d2b7fc7c7.nii.gz

+ 1 - 0
USM/sub-0050475/mri/aal3_sub-0050475_T1w.csv
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

+ 1 - 0
USM/sub-0050475/mri/aal3_sub-0050475_T1w.nii.gz
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/87/Gg/MD5E-s544223--6141c3eee9b7581fb29b4d0a51091628.nii.gz/MD5E-s544223--6141c3eee9b7581fb29b4d0a51091628.nii.gz

+ 1 - 0
USM/sub-0050475/mri/anatomy3_sub-0050475_T1w.csv
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

+ 1 - 0
USM/sub-0050475/mri/anatomy3_sub-0050475_T1w.nii.gz
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/X1/WV/MD5E-s394471--b596c56cd0fab556fe70069f645d38fb.nii.gz/MD5E-s394471--b596c56cd0fab556fe70069f645d38fb.nii.gz

+ 1 - 0
USM/sub-0050475/mri/anon_misub-0050475_T1w.nii.gz
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/mz/JZ/MD5E-s19122446--85e2a17579643b537627602379753156.nii.gz/MD5E-s19122446--85e2a17579643b537627602379753156.nii.gz

+ 1 - 0
USM/sub-0050475/mri/anon_msub-0050475_T1w.nii.gz
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/Gm/9q/MD5E-s32898570--f1c220728af18e633e3f77558c0ddcda.nii.gz/MD5E-s32898570--f1c220728af18e633e3f77558c0ddcda.nii.gz

+ 1 - 0
USM/sub-0050475/mri/cat_sub-0050475_T1w.nii.gz
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/ZJ/wk/MD5E-s247568--2c931044c0d522cc4a776679fecf294b.nii.gz/MD5E-s247568--2c931044c0d522cc4a776679fecf294b.nii.gz

+ 1 - 0
USM/sub-0050475/mri/cobra_sub-0050475_T1w.csv
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

+ 1 - 0
USM/sub-0050475/mri/cobra_sub-0050475_T1w.nii.gz
Zobrazit soubor 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/0X/jG/MD5E-s148344--848c441e80cde34ce7211e5e4de81d25.nii.gz/MD5E-s148344--848c441e80cde34ce7211e5e4de81d25.nii.gz

+ 1 - 0
USM/sub-0050475/mri/hammers_sub-0050475_T1w.csv
Zobrazit soubor 

@@ -0,0 +1 @@
 
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USM/sub-0050475/surf/rh.fractaldimension.sub-0050475_T1w
Zobrazit soubor 

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USM/sub-0050475/surf/rh.gmv.sub-0050475_T1w
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USM/sub-0050475/surf/rh.gyrification.sub-0050475_T1w
Zobrazit soubor 

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USM/sub-0050475/surf/rh.pbt.sub-0050475_T1w
Zobrazit soubor 

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USM/sub-0050475/surf/rh.sphere.reg.sub-0050475_T1w.gii
Zobrazit soubor 

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USM/sub-0050475/surf/rh.sphere.sub-0050475_T1w.gii
Zobrazit soubor 

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USM/sub-0050475/surf/rh.thickness.sub-0050475_T1w
Zobrazit soubor 

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USM/sub-0050475/surf/rh.toroGI20mm.sub-0050475_T1w
Zobrazit soubor 

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USM/sub-0050475/surf/s12.mesh.thickness.resampled_32k.sub-0050475_T1w.dat
Zobrazit soubor 

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USM/sub-0050475/surf/s12.mesh.thickness.resampled_32k.sub-0050475_T1w.gii
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USM/sub-0050475/surf/s22.mesh.area.resampled_32k.sub-0050475_T1w.dat
Zobrazit soubor 

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USM/sub-0050475/surf/s22.mesh.area.resampled_32k.sub-0050475_T1w.gii
Zobrazit soubor 

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USM/sub-0050475/surf/s22.mesh.depth.resampled_32k.sub-0050475_T1w.dat
Zobrazit soubor 

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USM/sub-0050475/surf/s22.mesh.depth.resampled_32k.sub-0050475_T1w.gii
Zobrazit soubor 

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USM/sub-0050475/surf/s22.mesh.fractaldimension.resampled_32k.sub-0050475_T1w.dat
Zobrazit soubor 

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USM/sub-0050475/surf/s22.mesh.fractaldimension.resampled_32k.sub-0050475_T1w.gii
Zobrazit soubor


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