[DATALAD RUNCMD] Compute MaxMun_b/sub-0051326

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/MaxMun_b/sub-0051326/anat/sub-0051326_T1w.nii.gz"
 ],
 "outputs": [
  "MaxMun_b/sub-0051326"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

MaxMun_b/sub-0051326/label/catROI_sub-0051326_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/0G/JG/MD5E-s57928--ad94c9ebb85efbc799a12fc084dc72fa.mat/MD5E-s57928--ad94c9ebb85efbc799a12fc084dc72fa.mat

MaxMun_b/sub-0051326/label/catROI_sub-0051326_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/X7/35/MD5E-s188592--a278a2bc7a04208e99860f0a8d846822.xml/MD5E-s188592--a278a2bc7a04208e99860f0a8d846822.xml

MaxMun_b/sub-0051326/label/catROIs_sub-0051326_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/mK/q4/MD5E-s120092--0f9e4d019ac9ccb0da9057fa307dd1d6.mat/MD5E-s120092--0f9e4d019ac9ccb0da9057fa307dd1d6.mat

MaxMun_b/sub-0051326/label/catROIs_sub-0051326_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/wx/xk/MD5E-s332120--dc169ae48c6458faeb279e110e317948.xml/MD5E-s332120--dc169ae48c6458faeb279e110e317948.xml

MaxMun_b/sub-0051326/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

MaxMun_b/sub-0051326/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/ZF/Q1/MD5E-s173439--87675e3c036db2734ef406c7f22fc455.nii.gz/MD5E-s173439--87675e3c036db2734ef406c7f22fc455.nii.gz

MaxMun_b/sub-0051326/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

MaxMun_b/sub-0051326/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/5k/xX/MD5E-s193404--463df0d338d3b11603a353992b7106b2.nii.gz/MD5E-s193404--463df0d338d3b11603a353992b7106b2.nii.gz

MaxMun_b/sub-0051326/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

MaxMun_b/sub-0051326/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Z6/Fk/MD5E-s261066--8ed55a0bfd12fd7ecd6988ca1692e6db.nii.gz/MD5E-s261066--8ed55a0bfd12fd7ecd6988ca1692e6db.nii.gz

MaxMun_b/sub-0051326/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

MaxMun_b/sub-0051326/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/2K/mw/MD5E-s288578--b6a0e39239a193fad78363cb3f46c219.nii.gz/MD5E-s288578--b6a0e39239a193fad78363cb3f46c219.nii.gz

MaxMun_b/sub-0051326/mri/Tian_Subcortex_S2_7T_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

MaxMun_b/sub-0051326/mri/Tian_Subcortex_S2_7T_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/wg/Q7/MD5E-s23228--31db2858a4d70fdd517950d6a8ab8c39.nii.gz/MD5E-s23228--31db2858a4d70fdd517950d6a8ab8c39.nii.gz

MaxMun_b/sub-0051326/mri/aal3_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

MaxMun_b/sub-0051326/mri/aal3_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/48/0x/MD5E-s196708--991f0aacb46929c86ce945b5f0a15d18.nii.gz/MD5E-s196708--991f0aacb46929c86ce945b5f0a15d18.nii.gz

MaxMun_b/sub-0051326/mri/anatomy3_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

MaxMun_b/sub-0051326/mri/anatomy3_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gF/05/MD5E-s140474--2122a9b58b901d9446acbf572a159378.nii.gz/MD5E-s140474--2122a9b58b901d9446acbf572a159378.nii.gz

MaxMun_b/sub-0051326/mri/anon_misub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/v6/xq/MD5E-s4988982--822c47157e9c60cdff41cf4e1c1e974f.nii.gz/MD5E-s4988982--822c47157e9c60cdff41cf4e1c1e974f.nii.gz

MaxMun_b/sub-0051326/mri/anon_msub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/J5/gj/MD5E-s8906187--8e9fe7c97ccb9205de86c13315c03933.nii.gz/MD5E-s8906187--8e9fe7c97ccb9205de86c13315c03933.nii.gz

MaxMun_b/sub-0051326/mri/cat_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pg/zm/MD5E-s106145--af9edd7a948f04323a84274f89d842fe.nii.gz/MD5E-s106145--af9edd7a948f04323a84274f89d842fe.nii.gz

MaxMun_b/sub-0051326/mri/cobra_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

MaxMun_b/sub-0051326/mri/cobra_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3q/z2/MD5E-s48117--11096923c52d8cd69a18213aafff741e.nii.gz/MD5E-s48117--11096923c52d8cd69a18213aafff741e.nii.gz

MaxMun_b/sub-0051326/mri/hammers_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

MaxMun_b/sub-0051326/mri/hammers_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/JQ/v1/MD5E-s154960--def2ffafd424238eaae3e98e8a5d9ef7.nii.gz/MD5E-s154960--def2ffafd424238eaae3e98e8a5d9ef7.nii.gz

MaxMun_b/sub-0051326/mri/ibsr_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

MaxMun_b/sub-0051326/mri/ibsr_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Gv/2g/MD5E-s162291--593cc9557c39bad01ad8f36c8880d90a.nii.gz/MD5E-s162291--593cc9557c39bad01ad8f36c8880d90a.nii.gz

MaxMun_b/sub-0051326/mri/it_sub-0051326_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/w0/JW/MD5E-s283--864533f5034ca7b44d8e32bae896bc29.mat/MD5E-s283--864533f5034ca7b44d8e32bae896bc29.mat

MaxMun_b/sub-0051326/mri/it_sub-0051326_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/X2/VW/MD5E-s284--78ad455984454c0288a6888f6231b43e.mat/MD5E-s284--78ad455984454c0288a6888f6231b43e.mat

MaxMun_b/sub-0051326/mri/iy_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/20/2k/MD5E-s48190491--f6e8b6466ecfe5104f139fa66f7c8a01.nii.gz/MD5E-s48190491--f6e8b6466ecfe5104f139fa66f7c8a01.nii.gz

MaxMun_b/sub-0051326/mri/julichbrain_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

MaxMun_b/sub-0051326/mri/julichbrain_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/M7/M3/MD5E-s209985--347e7f15f929b79dc8fcd9a53a795a2c.nii.gz/MD5E-s209985--347e7f15f929b79dc8fcd9a53a795a2c.nii.gz

MaxMun_b/sub-0051326/mri/lpba40_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

MaxMun_b/sub-0051326/mri/lpba40_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/p3/m0/MD5E-s151275--2e1e26870f811230eada6c41e182727d.nii.gz/MD5E-s151275--2e1e26870f811230eada6c41e182727d.nii.gz

MaxMun_b/sub-0051326/mri/m0wp1sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pz/Xw/MD5E-s2588489--fe373f73432bb6778c1c4f3f0b78c8d0.nii.gz/MD5E-s2588489--fe373f73432bb6778c1c4f3f0b78c8d0.nii.gz

MaxMun_b/sub-0051326/mri/m0wp2sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jW/P5/MD5E-s2322402--47f78cd1e48bf7dc0141e89fb25df530.nii.gz/MD5E-s2322402--47f78cd1e48bf7dc0141e89fb25df530.nii.gz

MaxMun_b/sub-0051326/mri/m0wp3sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/mori_sub-0051326_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

MaxMun_b/sub-0051326/mri/mori_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/mwp1sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/k5/M1/MD5E-s2588930--9a7f65537f77aa3908c600db91cb5eab.nii.gz/MD5E-s2588930--9a7f65537f77aa3908c600db91cb5eab.nii.gz

MaxMun_b/sub-0051326/mri/mwp2sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/m5/xW/MD5E-s2319420--7af886ae41461d2dd7983b098d7b8236.nii.gz/MD5E-s2319420--7af886ae41461d2dd7983b098d7b8236.nii.gz

MaxMun_b/sub-0051326/mri/mwp3sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/2g/9p/MD5E-s2602327--4cfa03c9a70048ce5a6d377719f863b3.nii.gz/MD5E-s2602327--4cfa03c9a70048ce5a6d377719f863b3.nii.gz

MaxMun_b/sub-0051326/mri/neuromorphometrics_sub-0051326_T1w.csv

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/neuromorphometrics_sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/p0sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/p1sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/p2sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/p3sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/rp1sub-0051326_T1w_affine.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/rp2sub-0051326_T1w_affine.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/rp3sub-0051326_T1w_affine.nii.gz

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MaxMun_b/sub-0051326/mri/t_sub-0051326_T1w_affine_reorient.mat

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MaxMun_b/sub-0051326/mri/t_sub-0051326_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/thalamus_sub-0051326_T1w.csv

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MaxMun_b/sub-0051326/mri/thalamus_sub-0051326_T1w.nii.gz

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MaxMun_b/sub-0051326/mri/wj_sub-0051326_T1w.nii.gz

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MaxMun_b/sub-0051326/mri/wmisub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/wmsub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/wp0sub-0051326_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051326/mri/wp1sub-0051326_T1w.nii.gz

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