[DATALAD RUNCMD] Compute KKI/sub-0050773

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/KKI/sub-0050773/anat/sub-0050773_T1w.nii.gz"
 ],
 "outputs": [
  "KKI/sub-0050773"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

KKI/sub-0050773/label/catROI_sub-0050773_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/pj/Gg/MD5E-s61345--548a877cbcce891801420721fbdd9b53.mat/MD5E-s61345--548a877cbcce891801420721fbdd9b53.mat

KKI/sub-0050773/label/catROI_sub-0050773_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/wM/VF/MD5E-s188662--268802dd04e6c046ceddc35fcef0c55e.xml/MD5E-s188662--268802dd04e6c046ceddc35fcef0c55e.xml

KKI/sub-0050773/label/catROIs_sub-0050773_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/1v/mx/MD5E-s120187--f5ff637ebfb2273e5e4d525ed11c93a1.mat/MD5E-s120187--f5ff637ebfb2273e5e4d525ed11c93a1.mat

KKI/sub-0050773/label/catROIs_sub-0050773_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/5g/x0/MD5E-s332184--694f37f7dbe10c1a16fd52cc1dfdc0d9.xml/MD5E-s332184--694f37f7dbe10c1a16fd52cc1dfdc0d9.xml

KKI/sub-0050773/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

KKI/sub-0050773/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/XM/zm/MD5E-s199541--a425e4b0d370c8d87f84dd27229292f2.nii.gz/MD5E-s199541--a425e4b0d370c8d87f84dd27229292f2.nii.gz

KKI/sub-0050773/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

KKI/sub-0050773/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/9m/MD5E-s225584--8f7f128e72e6305776a2926359d12771.nii.gz/MD5E-s225584--8f7f128e72e6305776a2926359d12771.nii.gz

KKI/sub-0050773/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

KKI/sub-0050773/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6F/j9/MD5E-s287104--725e0949b2dbe998feaf7395a8b97f75.nii.gz/MD5E-s287104--725e0949b2dbe998feaf7395a8b97f75.nii.gz

KKI/sub-0050773/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

KKI/sub-0050773/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qZ/4G/MD5E-s319861--3c003b540c675bc4ee547ea40031aead.nii.gz/MD5E-s319861--3c003b540c675bc4ee547ea40031aead.nii.gz

KKI/sub-0050773/mri/Tian_Subcortex_S2_7T_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

KKI/sub-0050773/mri/Tian_Subcortex_S2_7T_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xq/7w/MD5E-s27967--258559549c344b306908a592a0ce2f53.nii.gz/MD5E-s27967--258559549c344b306908a592a0ce2f53.nii.gz

KKI/sub-0050773/mri/aal3_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

KKI/sub-0050773/mri/aal3_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/wW/Mf/MD5E-s224809--037d75cdaf441db86112858d6206b164.nii.gz/MD5E-s224809--037d75cdaf441db86112858d6206b164.nii.gz

KKI/sub-0050773/mri/anatomy3_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

KKI/sub-0050773/mri/anatomy3_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Gw/MM/MD5E-s163003--24dcb6b361223bbe235e17b220dea975.nii.gz/MD5E-s163003--24dcb6b361223bbe235e17b220dea975.nii.gz

KKI/sub-0050773/mri/anon_misub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/FF/M6/MD5E-s4723896--a0f97339cf00e3f1b793b1b29f0acf0e.nii.gz/MD5E-s4723896--a0f97339cf00e3f1b793b1b29f0acf0e.nii.gz

KKI/sub-0050773/mri/anon_msub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/J1/kx/MD5E-s13119039--01d84f2fbb82203a5c042ae14c724740.nii.gz/MD5E-s13119039--01d84f2fbb82203a5c042ae14c724740.nii.gz

KKI/sub-0050773/mri/cat_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/W3/MP/MD5E-s117144--a3ac6e6076a052c1e2c8bd561da6696b.nii.gz/MD5E-s117144--a3ac6e6076a052c1e2c8bd561da6696b.nii.gz

KKI/sub-0050773/mri/cobra_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

KKI/sub-0050773/mri/cobra_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/v3/MP/MD5E-s56817--82206060792850b07f7bfd152c520c19.nii.gz/MD5E-s56817--82206060792850b07f7bfd152c520c19.nii.gz

KKI/sub-0050773/mri/hammers_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

KKI/sub-0050773/mri/hammers_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/j2/KG/MD5E-s175138--703e7832d97daf7303ff8e00c0745504.nii.gz/MD5E-s175138--703e7832d97daf7303ff8e00c0745504.nii.gz

KKI/sub-0050773/mri/ibsr_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

KKI/sub-0050773/mri/ibsr_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0J/V0/MD5E-s181853--b89d91e860114a9f67c07c53f947e699.nii.gz/MD5E-s181853--b89d91e860114a9f67c07c53f947e699.nii.gz

KKI/sub-0050773/mri/it_sub-0050773_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/VG/qJ/MD5E-s283--721f1b74512f46c7db1ab2f2a3a3d1b0.mat/MD5E-s283--721f1b74512f46c7db1ab2f2a3a3d1b0.mat

KKI/sub-0050773/mri/it_sub-0050773_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/xg/Kg/MD5E-s284--5dae68d792c9808d89202154fddd13f5.mat/MD5E-s284--5dae68d792c9808d89202154fddd13f5.mat

KKI/sub-0050773/mri/iy_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4g/mv/MD5E-s49429208--fe825837177115e362a7e4b5930130fd.nii.gz/MD5E-s49429208--fe825837177115e362a7e4b5930130fd.nii.gz

KKI/sub-0050773/mri/julichbrain_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

KKI/sub-0050773/mri/julichbrain_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/5M/9V/MD5E-s239003--d0a5b5c662d3bb05b59d25cc58d252f4.nii.gz/MD5E-s239003--d0a5b5c662d3bb05b59d25cc58d252f4.nii.gz

KKI/sub-0050773/mri/lpba40_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

KKI/sub-0050773/mri/lpba40_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Kp/7p/MD5E-s173089--b3dac7b43546b70f3c866cd8dcddcfd8.nii.gz/MD5E-s173089--b3dac7b43546b70f3c866cd8dcddcfd8.nii.gz

KKI/sub-0050773/mri/m0wp1sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/62/0X/MD5E-s2593707--132c6ece82130eb2201682c86ee773b0.nii.gz/MD5E-s2593707--132c6ece82130eb2201682c86ee773b0.nii.gz

KKI/sub-0050773/mri/m0wp2sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7J/24/MD5E-s2289514--edaa8819b85d15b40e2c5966d4fc9cff.nii.gz/MD5E-s2289514--edaa8819b85d15b40e2c5966d4fc9cff.nii.gz

KKI/sub-0050773/mri/m0wp3sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/g1/28/MD5E-s2457606--18d043707908618af663bc8c7e9f0cab.nii.gz/MD5E-s2457606--18d043707908618af663bc8c7e9f0cab.nii.gz

KKI/sub-0050773/mri/mori_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

KKI/sub-0050773/mri/mori_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050773/mri/mwp1sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/mm/5f/MD5E-s2596700--1b57a50015d7ca7e62a87e0ccc955f73.nii.gz/MD5E-s2596700--1b57a50015d7ca7e62a87e0ccc955f73.nii.gz

KKI/sub-0050773/mri/mwp2sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/W2/wV/MD5E-s2287841--b0f1193d3b1e737a8df3e5851b87b951.nii.gz/MD5E-s2287841--b0f1193d3b1e737a8df3e5851b87b951.nii.gz

KKI/sub-0050773/mri/mwp3sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/J0/j2/MD5E-s2456988--c0febc7bdefc3ee4757ba0d16e96dbc3.nii.gz/MD5E-s2456988--c0febc7bdefc3ee4757ba0d16e96dbc3.nii.gz

KKI/sub-0050773/mri/neuromorphometrics_sub-0050773_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

KKI/sub-0050773/mri/neuromorphometrics_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6q/8X/MD5E-s237008--bad17ac3d84c3be943954658fb9dea31.nii.gz/MD5E-s237008--bad17ac3d84c3be943954658fb9dea31.nii.gz

KKI/sub-0050773/mri/p0sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jg/8k/MD5E-s693471--1d10070df16fd4f92774c6cf33b9cddc.nii.gz/MD5E-s693471--1d10070df16fd4f92774c6cf33b9cddc.nii.gz

KKI/sub-0050773/mri/p1sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Fk/17/MD5E-s747085--926a106c61beac68c486b3aa95c456dc.nii.gz/MD5E-s747085--926a106c61beac68c486b3aa95c456dc.nii.gz

KKI/sub-0050773/mri/p2sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/fv/JF/MD5E-s504329--7c4572354a4d2f4601ab901765221290.nii.gz/MD5E-s504329--7c4572354a4d2f4601ab901765221290.nii.gz

KKI/sub-0050773/mri/p3sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4m/x6/MD5E-s385136--a42d2df8f5d6c52399d63d262aa2240a.nii.gz/MD5E-s385136--a42d2df8f5d6c52399d63d262aa2240a.nii.gz

KKI/sub-0050773/mri/rp1sub-0050773_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/52/pX/MD5E-s452967--f628ff0e71ba59cc28f3e1be3a3289b7.nii.gz/MD5E-s452967--f628ff0e71ba59cc28f3e1be3a3289b7.nii.gz

KKI/sub-0050773/mri/rp2sub-0050773_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/j2/V4/MD5E-s313384--36647490631fe8d15b5bfb4c9b70cc3d.nii.gz/MD5E-s313384--36647490631fe8d15b5bfb4c9b70cc3d.nii.gz

KKI/sub-0050773/mri/rp3sub-0050773_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/JX/2v/MD5E-s258034--87cfe7f210b97eb413b53951b0e366b3.nii.gz/MD5E-s258034--87cfe7f210b97eb413b53951b0e366b3.nii.gz

KKI/sub-0050773/mri/t_sub-0050773_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/jK/7v/MD5E-s283--302c3dc8ebb6521d51507c96c6638653.mat/MD5E-s283--302c3dc8ebb6521d51507c96c6638653.mat

KKI/sub-0050773/mri/t_sub-0050773_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/0P/fW/MD5E-s284--e5a0bde03804cb36f3ea231e07b2c408.mat/MD5E-s284--e5a0bde03804cb36f3ea231e07b2c408.mat

KKI/sub-0050773/mri/thalamus_sub-0050773_T1w.csv

@@ -0,0 +1 @@
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KKI/sub-0050773/mri/thalamus_sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050773/mri/wj_sub-0050773_T1w.nii.gz

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KKI/sub-0050773/mri/wmisub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050773/mri/wmsub-0050773_T1w.nii.gz

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KKI/sub-0050773/mri/wp0sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050773/mri/wp1sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050773/mri/wp2sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050773/mri/wp3sub-0050773_T1w.nii.gz

@@ -0,0 +1 @@
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KKI/sub-0050773/mri/y_sub-0050773_T1w.nii.gz

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