[DATALAD RUNCMD] Compute Trinity/sub-0051137

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/Trinity/sub-0051137/anat/sub-0051137_T1w.nii.gz"
 ],
 "outputs": [
  "Trinity/sub-0051137"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

Trinity/sub-0051137/label/catROI_sub-0051137_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/mx/qW/MD5E-s61428--4d08fde51010fe027c17700b135fbc54.mat/MD5E-s61428--4d08fde51010fe027c17700b135fbc54.mat

Trinity/sub-0051137/label/catROI_sub-0051137_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/mq/M8/MD5E-s188655--9ab689d0cef97918106da558c328b0ac.xml/MD5E-s188655--9ab689d0cef97918106da558c328b0ac.xml

Trinity/sub-0051137/label/catROIs_sub-0051137_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/GK/V0/MD5E-s120115--2831032d648eb069b556313c982a5332.mat/MD5E-s120115--2831032d648eb069b556313c982a5332.mat

Trinity/sub-0051137/label/catROIs_sub-0051137_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/1k/xv/MD5E-s332219--4ef61da94d8617d0f03f7460bd3f9cdd.xml/MD5E-s332219--4ef61da94d8617d0f03f7460bd3f9cdd.xml

Trinity/sub-0051137/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051137_T1w.csv

@@ -0,0 +1 @@
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Trinity/sub-0051137/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051137_T1w.nii.gz

@@ -0,0 +1 @@
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Trinity/sub-0051137/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051137_T1w.csv

@@ -0,0 +1 @@
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Trinity/sub-0051137/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051137_T1w.csv

@@ -0,0 +1 @@
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Trinity/sub-0051137/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051137_T1w.csv

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Trinity/sub-0051137/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051137_T1w.nii.gz

@@ -0,0 +1 @@
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Trinity/sub-0051137/mri/Tian_Subcortex_S2_7T_sub-0051137_T1w.csv

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Trinity/sub-0051137/mri/Tian_Subcortex_S2_7T_sub-0051137_T1w.nii.gz

@@ -0,0 +1 @@
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Trinity/sub-0051137/mri/aal3_sub-0051137_T1w.csv

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Trinity/sub-0051137/mri/aal3_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/anatomy3_sub-0051137_T1w.csv

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Trinity/sub-0051137/mri/anatomy3_sub-0051137_T1w.nii.gz

@@ -0,0 +1 @@
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Trinity/sub-0051137/mri/anon_misub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/anon_msub-0051137_T1w.nii.gz

@@ -0,0 +1 @@
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Trinity/sub-0051137/mri/cat_sub-0051137_T1w.nii.gz

@@ -0,0 +1 @@
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Trinity/sub-0051137/mri/cobra_sub-0051137_T1w.csv

@@ -0,0 +1 @@
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Trinity/sub-0051137/mri/cobra_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/hammers_sub-0051137_T1w.csv

@@ -0,0 +1 @@
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Trinity/sub-0051137/mri/hammers_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/ibsr_sub-0051137_T1w.csv

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Trinity/sub-0051137/mri/ibsr_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/it_sub-0051137_T1w_affine_reorient.mat

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Trinity/sub-0051137/mri/it_sub-0051137_T1w_rigid_reorient.mat

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Trinity/sub-0051137/mri/iy_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/julichbrain_sub-0051137_T1w.csv

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Trinity/sub-0051137/mri/julichbrain_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/lpba40_sub-0051137_T1w.csv

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Trinity/sub-0051137/mri/lpba40_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/m0wp1sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/m0wp2sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/m0wp3sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/mori_sub-0051137_T1w.csv

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Trinity/sub-0051137/mri/mori_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/mwp1sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/mwp2sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/mwp3sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/neuromorphometrics_sub-0051137_T1w.csv

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Trinity/sub-0051137/mri/neuromorphometrics_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/p0sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/p1sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/p2sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/p3sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/rp1sub-0051137_T1w_affine.nii.gz

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Trinity/sub-0051137/mri/rp2sub-0051137_T1w_affine.nii.gz

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Trinity/sub-0051137/mri/rp3sub-0051137_T1w_affine.nii.gz

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Trinity/sub-0051137/mri/t_sub-0051137_T1w_affine_reorient.mat

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Trinity/sub-0051137/mri/t_sub-0051137_T1w_rigid_reorient.mat

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Trinity/sub-0051137/mri/thalamus_sub-0051137_T1w.csv

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Trinity/sub-0051137/mri/thalamus_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/wj_sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/wp0sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/wp1sub-0051137_T1w.nii.gz

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Trinity/sub-0051137/mri/wp2sub-0051137_T1w.nii.gz

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