[DATALAD RUNCMD] Compute MaxMun_c/sub-0051338

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/MaxMun_c/sub-0051338/anat/sub-0051338_T1w.nii.gz"
 ],
 "outputs": [
  "MaxMun_c/sub-0051338"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

MaxMun_c/sub-0051338/label/catROI_sub-0051338_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/q9/Wm/MD5E-s57775--5fba8d0f8a27bd5c9cf2521ec2ca0f58.mat/MD5E-s57775--5fba8d0f8a27bd5c9cf2521ec2ca0f58.mat

MaxMun_c/sub-0051338/label/catROI_sub-0051338_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/wf/kz/MD5E-s188664--2a47897d679658e7b58bf123132ea14d.xml/MD5E-s188664--2a47897d679658e7b58bf123132ea14d.xml

MaxMun_c/sub-0051338/label/catROIs_sub-0051338_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/9J/V3/MD5E-s120133--47f4abd1de340ea03e5edc45bf7a995d.mat/MD5E-s120133--47f4abd1de340ea03e5edc45bf7a995d.mat

MaxMun_c/sub-0051338/label/catROIs_sub-0051338_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/M2/X6/MD5E-s332073--11c7498d850120499c0e58e301fc5382.xml/MD5E-s332073--11c7498d850120499c0e58e301fc5382.xml

MaxMun_c/sub-0051338/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051338_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

MaxMun_c/sub-0051338/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051338_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/X0/Qj/MD5E-s159569--a0302fb61bb5733270b0bd31b28e05f6.nii.gz/MD5E-s159569--a0302fb61bb5733270b0bd31b28e05f6.nii.gz

MaxMun_c/sub-0051338/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051338_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

MaxMun_c/sub-0051338/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051338_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/J8/48/MD5E-s178389--7245ca4905015bbe07993ee882d27323.nii.gz/MD5E-s178389--7245ca4905015bbe07993ee882d27323.nii.gz

MaxMun_c/sub-0051338/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051338_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

MaxMun_c/sub-0051338/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051338_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_c/sub-0051338/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051338_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

MaxMun_c/sub-0051338/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051338_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/67/wX/MD5E-s269313--c8f19daf75321c4ac561ee8dddf55594.nii.gz/MD5E-s269313--c8f19daf75321c4ac561ee8dddf55594.nii.gz

MaxMun_c/sub-0051338/mri/Tian_Subcortex_S2_7T_sub-0051338_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

MaxMun_c/sub-0051338/mri/Tian_Subcortex_S2_7T_sub-0051338_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/fw/28/MD5E-s22066--8ec70fca4dcaa6381302c891ddaff848.nii.gz/MD5E-s22066--8ec70fca4dcaa6381302c891ddaff848.nii.gz

MaxMun_c/sub-0051338/mri/aal3_sub-0051338_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

MaxMun_c/sub-0051338/mri/aal3_sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/anatomy3_sub-0051338_T1w.csv

@@ -0,0 +1 @@
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MaxMun_c/sub-0051338/mri/anatomy3_sub-0051338_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_c/sub-0051338/mri/anon_misub-0051338_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/J9/5W/MD5E-s8299855--f8f40de52b5d6118b591e6b3c465c708.nii.gz/MD5E-s8299855--f8f40de52b5d6118b591e6b3c465c708.nii.gz

MaxMun_c/sub-0051338/mri/anon_msub-0051338_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Z4/w8/MD5E-s8882861--e5c60c006887dffe43a48bdda096c83b.nii.gz/MD5E-s8882861--e5c60c006887dffe43a48bdda096c83b.nii.gz

MaxMun_c/sub-0051338/mri/cat_sub-0051338_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xz/J9/MD5E-s96205--b2feba9549252ad17887406947df626d.nii.gz/MD5E-s96205--b2feba9549252ad17887406947df626d.nii.gz

MaxMun_c/sub-0051338/mri/cobra_sub-0051338_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

MaxMun_c/sub-0051338/mri/cobra_sub-0051338_T1w.nii.gz

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+../../../.git/annex/objects/x0/74/MD5E-s45877--3160eb253cef63422ac09c5ffd8303b8.nii.gz/MD5E-s45877--3160eb253cef63422ac09c5ffd8303b8.nii.gz

MaxMun_c/sub-0051338/mri/hammers_sub-0051338_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

MaxMun_c/sub-0051338/mri/hammers_sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/ibsr_sub-0051338_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

MaxMun_c/sub-0051338/mri/ibsr_sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/it_sub-0051338_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/KV/qz/MD5E-s280--f2ab4a09cf224c7a553eff923870eaa0.mat/MD5E-s280--f2ab4a09cf224c7a553eff923870eaa0.mat

MaxMun_c/sub-0051338/mri/it_sub-0051338_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/jz/q1/MD5E-s281--2943c6d7ae80af99924b39cdadb6771e.mat/MD5E-s281--2943c6d7ae80af99924b39cdadb6771e.mat

MaxMun_c/sub-0051338/mri/iy_sub-0051338_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/GJ/GX/MD5E-s44798650--6fb23914e83ba3bb270867236565a957.nii.gz/MD5E-s44798650--6fb23914e83ba3bb270867236565a957.nii.gz

MaxMun_c/sub-0051338/mri/julichbrain_sub-0051338_T1w.csv

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MaxMun_c/sub-0051338/mri/julichbrain_sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/lpba40_sub-0051338_T1w.csv

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MaxMun_c/sub-0051338/mri/lpba40_sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/m0wp1sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/m0wp2sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/m0wp3sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/mori_sub-0051338_T1w.csv

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MaxMun_c/sub-0051338/mri/mori_sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/mwp1sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/mwp2sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/mwp3sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/neuromorphometrics_sub-0051338_T1w.csv

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MaxMun_c/sub-0051338/mri/neuromorphometrics_sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/p0sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/p1sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/p2sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/p3sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/rp1sub-0051338_T1w_affine.nii.gz

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MaxMun_c/sub-0051338/mri/rp2sub-0051338_T1w_affine.nii.gz

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MaxMun_c/sub-0051338/mri/rp3sub-0051338_T1w_affine.nii.gz

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MaxMun_c/sub-0051338/mri/t_sub-0051338_T1w_affine_reorient.mat

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MaxMun_c/sub-0051338/mri/t_sub-0051338_T1w_rigid_reorient.mat

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MaxMun_c/sub-0051338/mri/thalamus_sub-0051338_T1w.csv

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MaxMun_c/sub-0051338/mri/thalamus_sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/wj_sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/wmisub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/wmsub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/wp0sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/wp1sub-0051338_T1w.nii.gz

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MaxMun_c/sub-0051338/mri/wp2sub-0051338_T1w.nii.gz

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