[DATALAD RUNCMD] Compute MaxMun_d/sub-0051350

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/MaxMun_d/sub-0051350/anat/sub-0051350_T1w.nii.gz"
 ],
 "outputs": [
  "MaxMun_d/sub-0051350"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

MaxMun_d/sub-0051350/label/catROI_sub-0051350_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/wz/xf/MD5E-s58099--8c27944bfc64d3b2a778c6bf9db82481.mat/MD5E-s58099--8c27944bfc64d3b2a778c6bf9db82481.mat

MaxMun_d/sub-0051350/label/catROI_sub-0051350_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/81/vW/MD5E-s188458--978c92220a3c7229811eecf9e5a487c4.xml/MD5E-s188458--978c92220a3c7229811eecf9e5a487c4.xml

MaxMun_d/sub-0051350/label/catROIs_sub-0051350_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/gZ/fV/MD5E-s120051--1182f486a46da394bb23218d13ed2349.mat/MD5E-s120051--1182f486a46da394bb23218d13ed2349.mat

MaxMun_d/sub-0051350/label/catROIs_sub-0051350_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/QP/4g/MD5E-s332084--4b357067e593b74ca9c37fabebcdf816.xml/MD5E-s332084--4b357067e593b74ca9c37fabebcdf816.xml

MaxMun_d/sub-0051350/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

MaxMun_d/sub-0051350/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jv/jJ/MD5E-s178309--a8d8e38230304a1e920c0eaad150ff84.nii.gz/MD5E-s178309--a8d8e38230304a1e920c0eaad150ff84.nii.gz

MaxMun_d/sub-0051350/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

MaxMun_d/sub-0051350/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gf/P8/MD5E-s199489--ce541f8b72c81452719a9583afe79461.nii.gz/MD5E-s199489--ce541f8b72c81452719a9583afe79461.nii.gz

MaxMun_d/sub-0051350/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

MaxMun_d/sub-0051350/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pW/43/MD5E-s269285--62785e5f2114ed129b7973b207c72b1b.nii.gz/MD5E-s269285--62785e5f2114ed129b7973b207c72b1b.nii.gz

MaxMun_d/sub-0051350/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

MaxMun_d/sub-0051350/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/XW/Jf/MD5E-s300282--210055fa1da1a401c3fba86eaa700d9d.nii.gz/MD5E-s300282--210055fa1da1a401c3fba86eaa700d9d.nii.gz

MaxMun_d/sub-0051350/mri/Tian_Subcortex_S2_7T_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

MaxMun_d/sub-0051350/mri/Tian_Subcortex_S2_7T_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3V/73/MD5E-s24993--7a896ecdce7939fa904a78b1fb13bf64.nii.gz/MD5E-s24993--7a896ecdce7939fa904a78b1fb13bf64.nii.gz

MaxMun_d/sub-0051350/mri/aal3_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

MaxMun_d/sub-0051350/mri/aal3_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/1X/MD5E-s202268--b165e73d86267994db0f6982446d1862.nii.gz/MD5E-s202268--b165e73d86267994db0f6982446d1862.nii.gz

MaxMun_d/sub-0051350/mri/anatomy3_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

MaxMun_d/sub-0051350/mri/anatomy3_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7X/q3/MD5E-s143866--90ca17b2712ab86d7f71182066cc69f3.nii.gz/MD5E-s143866--90ca17b2712ab86d7f71182066cc69f3.nii.gz

MaxMun_d/sub-0051350/mri/anon_misub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xw/g6/MD5E-s8152313--688d6e00886ad3bcecd10ea24ff341cf.nii.gz/MD5E-s8152313--688d6e00886ad3bcecd10ea24ff341cf.nii.gz

MaxMun_d/sub-0051350/mri/anon_msub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pq/2J/MD5E-s8153187--a15953f8db47c2cf7d93c870b5ca0d88.nii.gz/MD5E-s8153187--a15953f8db47c2cf7d93c870b5ca0d88.nii.gz

MaxMun_d/sub-0051350/mri/cat_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/KG/J8/MD5E-s105572--9a54e6a9bde778cd34c2b7efbc47fa63.nii.gz/MD5E-s105572--9a54e6a9bde778cd34c2b7efbc47fa63.nii.gz

MaxMun_d/sub-0051350/mri/cobra_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

MaxMun_d/sub-0051350/mri/cobra_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/f9/gM/MD5E-s50476--a75529e6c105135b4bf005c00c331286.nii.gz/MD5E-s50476--a75529e6c105135b4bf005c00c331286.nii.gz

MaxMun_d/sub-0051350/mri/hammers_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

MaxMun_d/sub-0051350/mri/hammers_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/5P/w0/MD5E-s161278--d7e0823ab49048b3acc0cd9ec1a9f9fe.nii.gz/MD5E-s161278--d7e0823ab49048b3acc0cd9ec1a9f9fe.nii.gz

MaxMun_d/sub-0051350/mri/ibsr_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

MaxMun_d/sub-0051350/mri/ibsr_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8G/kP/MD5E-s167284--a616e1a241d60ecefcb4c965c8bd1548.nii.gz/MD5E-s167284--a616e1a241d60ecefcb4c965c8bd1548.nii.gz

MaxMun_d/sub-0051350/mri/it_sub-0051350_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/zZ/7v/MD5E-s282--ba9045b20ef3f6baf9772b1948c0f526.mat/MD5E-s282--ba9045b20ef3f6baf9772b1948c0f526.mat

MaxMun_d/sub-0051350/mri/it_sub-0051350_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/MG/pk/MD5E-s283--f9c167d4bdf9800b631eebb7f1ffa18a.mat/MD5E-s283--f9c167d4bdf9800b631eebb7f1ffa18a.mat

MaxMun_d/sub-0051350/mri/iy_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/WP/M7/MD5E-s47872857--d279ac71f73a2820e6e830e05530f9d9.nii.gz/MD5E-s47872857--d279ac71f73a2820e6e830e05530f9d9.nii.gz

MaxMun_d/sub-0051350/mri/julichbrain_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

MaxMun_d/sub-0051350/mri/julichbrain_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9j/mQ/MD5E-s215648--472ccaa01857ee1dc1e392598da61e31.nii.gz/MD5E-s215648--472ccaa01857ee1dc1e392598da61e31.nii.gz

MaxMun_d/sub-0051350/mri/lpba40_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

MaxMun_d/sub-0051350/mri/lpba40_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/F3/4G/MD5E-s156987--be1d08517aa6e803bc1001ac721eb680.nii.gz/MD5E-s156987--be1d08517aa6e803bc1001ac721eb680.nii.gz

MaxMun_d/sub-0051350/mri/m0wp1sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vz/vg/MD5E-s2596785--7138e88b39d5cd6761171b225351bbdc.nii.gz/MD5E-s2596785--7138e88b39d5cd6761171b225351bbdc.nii.gz

MaxMun_d/sub-0051350/mri/m0wp2sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/73/gQ/MD5E-s2341961--8fb42ed07b36c54fb00e7cb648a3dd33.nii.gz/MD5E-s2341961--8fb42ed07b36c54fb00e7cb648a3dd33.nii.gz

MaxMun_d/sub-0051350/mri/m0wp3sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1Z/JJ/MD5E-s2463057--336a2ed2ccc3015ef1329c26b28f1eb1.nii.gz/MD5E-s2463057--336a2ed2ccc3015ef1329c26b28f1eb1.nii.gz

MaxMun_d/sub-0051350/mri/mori_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

MaxMun_d/sub-0051350/mri/mori_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/fX/1v/MD5E-s187166--cac224e4fd31ad313970bba5638c45ed.nii.gz/MD5E-s187166--cac224e4fd31ad313970bba5638c45ed.nii.gz

MaxMun_d/sub-0051350/mri/mwp1sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9M/KQ/MD5E-s2597998--f7f7bfe2957c5af5b737f8c7f340b13b.nii.gz/MD5E-s2597998--f7f7bfe2957c5af5b737f8c7f340b13b.nii.gz

MaxMun_d/sub-0051350/mri/mwp2sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/KZ/q1/MD5E-s2338706--52b6550084a80617377afa4ee40ea73b.nii.gz/MD5E-s2338706--52b6550084a80617377afa4ee40ea73b.nii.gz

MaxMun_d/sub-0051350/mri/mwp3sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/JG/Pp/MD5E-s2459350--45a8086b144794f27489fcf1c0a01626.nii.gz/MD5E-s2459350--45a8086b144794f27489fcf1c0a01626.nii.gz

MaxMun_d/sub-0051350/mri/neuromorphometrics_sub-0051350_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

MaxMun_d/sub-0051350/mri/neuromorphometrics_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/54/mM/MD5E-s218081--80fa9b4d4053cb62d6a7ba6378889f59.nii.gz/MD5E-s218081--80fa9b4d4053cb62d6a7ba6378889f59.nii.gz

MaxMun_d/sub-0051350/mri/p0sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/fm/26/MD5E-s700284--41e4512763bc2e7b1608981c3718d960.nii.gz/MD5E-s700284--41e4512763bc2e7b1608981c3718d960.nii.gz

MaxMun_d/sub-0051350/mri/p1sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/W9/k0/MD5E-s749926--efc65cd1c2bf84ffae15ec81920dce3a.nii.gz/MD5E-s749926--efc65cd1c2bf84ffae15ec81920dce3a.nii.gz

MaxMun_d/sub-0051350/mri/p2sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9v/PM/MD5E-s513314--0e9433a30168ad57c6d0d4915f8a6614.nii.gz/MD5E-s513314--0e9433a30168ad57c6d0d4915f8a6614.nii.gz

MaxMun_d/sub-0051350/mri/p3sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jQ/Mx/MD5E-s387508--1b7ca40c223d253f854d8ce83b68c5ed.nii.gz/MD5E-s387508--1b7ca40c223d253f854d8ce83b68c5ed.nii.gz

MaxMun_d/sub-0051350/mri/rp1sub-0051350_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xp/Z6/MD5E-s462341--06fe309153055e60ade6d8a65e45d317.nii.gz/MD5E-s462341--06fe309153055e60ade6d8a65e45d317.nii.gz

MaxMun_d/sub-0051350/mri/rp2sub-0051350_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xQ/gF/MD5E-s327162--3d07b0811b78987b09d5c4f59782fa00.nii.gz/MD5E-s327162--3d07b0811b78987b09d5c4f59782fa00.nii.gz

MaxMun_d/sub-0051350/mri/rp3sub-0051350_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/M5/fP/MD5E-s274156--f9ce0209342a39781351154699cbacd3.nii.gz/MD5E-s274156--f9ce0209342a39781351154699cbacd3.nii.gz

MaxMun_d/sub-0051350/mri/t_sub-0051350_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/8p/4F/MD5E-s285--67375cd0d1095fcb8504bf533addd5f0.mat/MD5E-s285--67375cd0d1095fcb8504bf533addd5f0.mat

MaxMun_d/sub-0051350/mri/t_sub-0051350_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/w7/1k/MD5E-s282--9d497e0dda9e6faa5f62d3cce486db4c.mat/MD5E-s282--9d497e0dda9e6faa5f62d3cce486db4c.mat

MaxMun_d/sub-0051350/mri/thalamus_sub-0051350_T1w.csv

@@ -0,0 +1 @@
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MaxMun_d/sub-0051350/mri/thalamus_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051350/mri/wj_sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051350/mri/wmisub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_d/sub-0051350/mri/wmsub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/F9/F0/MD5E-s1219355--6247300097d14d1c45746d636ee4936b.nii.gz/MD5E-s1219355--6247300097d14d1c45746d636ee4936b.nii.gz

MaxMun_d/sub-0051350/mri/wp0sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Z4/4z/MD5E-s515290--6fb927b2dd19c3a61d0763ce5251641a.nii.gz/MD5E-s515290--6fb927b2dd19c3a61d0763ce5251641a.nii.gz

MaxMun_d/sub-0051350/mri/wp1sub-0051350_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Kp/pW/MD5E-s579586--56180e254984ac2e40156dd8bedbbdd7.nii.gz/MD5E-s579586--56180e254984ac2e40156dd8bedbbdd7.nii.gz

MaxMun_d/sub-0051350/mri/wp2sub-0051350_T1w.nii.gz

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MaxMun_d/sub-0051350/report/cat_sub-0051350_T1w.mat

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MaxMun_d/sub-0051350/report/catlog_sub-0051350_T1w.nii.txt

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MaxMun_d/sub-0051350/report/catreport_sub-0051350_T1w.pdf

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MaxMun_d/sub-0051350/report/catreportj_sub-0051350_T1w.jpg

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MaxMun_d/sub-0051350/surf/lh.area.sub-0051350_T1w

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MaxMun_d/sub-0051350/surf/s22.mesh.fractaldimension.resampled_32k.sub-0051350_T1w.dat

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