[DATALAD RUNCMD] Compute UM_1/sub-0050302

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/UM_1/sub-0050302/anat/sub-0050302_T1w.nii.gz"
 ],
 "outputs": [
  "UM_1/sub-0050302"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

UM_1/sub-0050302/label/catROI_sub-0050302_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/j5/11/MD5E-s61363--05dd99362ed60dc800e7da681243c26f.mat/MD5E-s61363--05dd99362ed60dc800e7da681243c26f.mat

UM_1/sub-0050302/label/catROI_sub-0050302_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/1W/wF/MD5E-s189111--07d36eb1d91fbd1a2888f3f232f66b5e.xml/MD5E-s189111--07d36eb1d91fbd1a2888f3f232f66b5e.xml

UM_1/sub-0050302/label/catROIs_sub-0050302_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/G3/W6/MD5E-s120214--0ec15628fcbd6022b59c661c71fd7533.mat/MD5E-s120214--0ec15628fcbd6022b59c661c71fd7533.mat

UM_1/sub-0050302/label/catROIs_sub-0050302_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/qw/Q9/MD5E-s332110--7f54ce4a7a6a6cb236c892db8d9d6fb6.xml/MD5E-s332110--7f54ce4a7a6a6cb236c892db8d9d6fb6.xml

UM_1/sub-0050302/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050302_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

UM_1/sub-0050302/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050302_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/JG/X7/MD5E-s123827--4d2782d309aac88881818e1edce59314.nii.gz/MD5E-s123827--4d2782d309aac88881818e1edce59314.nii.gz

UM_1/sub-0050302/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050302_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

UM_1/sub-0050302/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050302_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/62/WG/MD5E-s139248--fa23406320423fdd79379cf8054ba7ff.nii.gz/MD5E-s139248--fa23406320423fdd79379cf8054ba7ff.nii.gz

UM_1/sub-0050302/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050302_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

UM_1/sub-0050302/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050302_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vv/Vx/MD5E-s174726--b9093b189ec732d3f4f0e5c00efe3f41.nii.gz/MD5E-s174726--b9093b189ec732d3f4f0e5c00efe3f41.nii.gz

UM_1/sub-0050302/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050302_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

UM_1/sub-0050302/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050302_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pv/Gv/MD5E-s194266--ec9f6bb5d2e8fe6ec9cc3192c9906a21.nii.gz/MD5E-s194266--ec9f6bb5d2e8fe6ec9cc3192c9906a21.nii.gz

UM_1/sub-0050302/mri/Tian_Subcortex_S2_7T_sub-0050302_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

UM_1/sub-0050302/mri/Tian_Subcortex_S2_7T_sub-0050302_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/zw/M4/MD5E-s15700--25532f1e8d11778295dcfd9ef4cd012b.nii.gz/MD5E-s15700--25532f1e8d11778295dcfd9ef4cd012b.nii.gz

UM_1/sub-0050302/mri/aal3_sub-0050302_T1w.csv

@@ -0,0 +1 @@
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UM_1/sub-0050302/mri/aal3_sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/anatomy3_sub-0050302_T1w.csv

@@ -0,0 +1 @@
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UM_1/sub-0050302/mri/anatomy3_sub-0050302_T1w.nii.gz

@@ -0,0 +1 @@
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UM_1/sub-0050302/mri/anon_misub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/anon_msub-0050302_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/f9/qk/MD5E-s4676841--b72150b808bf3ac05e17604dc01e2c71.nii.gz/MD5E-s4676841--b72150b808bf3ac05e17604dc01e2c71.nii.gz

UM_1/sub-0050302/mri/cat_sub-0050302_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Qk/Kw/MD5E-s69810--6c1a64c81bfd799c90aaf0e3700c8aca.nii.gz/MD5E-s69810--6c1a64c81bfd799c90aaf0e3700c8aca.nii.gz

UM_1/sub-0050302/mri/cobra_sub-0050302_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

UM_1/sub-0050302/mri/cobra_sub-0050302_T1w.nii.gz

@@ -0,0 +1 @@
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UM_1/sub-0050302/mri/hammers_sub-0050302_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

UM_1/sub-0050302/mri/hammers_sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/ibsr_sub-0050302_T1w.csv

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UM_1/sub-0050302/mri/ibsr_sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/it_sub-0050302_T1w_affine_reorient.mat

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UM_1/sub-0050302/mri/it_sub-0050302_T1w_rigid_reorient.mat

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UM_1/sub-0050302/mri/iy_sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/julichbrain_sub-0050302_T1w.csv

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UM_1/sub-0050302/mri/julichbrain_sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/lpba40_sub-0050302_T1w.csv

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UM_1/sub-0050302/mri/lpba40_sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/m0wp1sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/m0wp2sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/m0wp3sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/mori_sub-0050302_T1w.csv

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UM_1/sub-0050302/mri/mori_sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/mwp1sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/mwp2sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/mwp3sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/neuromorphometrics_sub-0050302_T1w.csv

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UM_1/sub-0050302/mri/neuromorphometrics_sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/p0sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/p1sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/p2sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/p3sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/rp1sub-0050302_T1w_affine.nii.gz

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UM_1/sub-0050302/mri/rp2sub-0050302_T1w_affine.nii.gz

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UM_1/sub-0050302/mri/rp3sub-0050302_T1w_affine.nii.gz

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UM_1/sub-0050302/mri/t_sub-0050302_T1w_affine_reorient.mat

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UM_1/sub-0050302/mri/t_sub-0050302_T1w_rigid_reorient.mat

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UM_1/sub-0050302/mri/thalamus_sub-0050302_T1w.csv

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UM_1/sub-0050302/mri/thalamus_sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/wj_sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/wmisub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/wmsub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/wp0sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/wp1sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/wp2sub-0050302_T1w.nii.gz

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UM_1/sub-0050302/mri/wp3sub-0050302_T1w.nii.gz

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