[DATALAD RUNCMD] Compute SBL/sub-0051575

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/SBL/sub-0051575/anat/sub-0051575_T1w.nii.gz"
 ],
 "outputs": [
  "SBL/sub-0051575"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

SBL/sub-0051575/label/catROI_sub-0051575_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/f1/9G/MD5E-s61479--1e2403b765c2c1a83f9071f0c54cc8a9.mat/MD5E-s61479--1e2403b765c2c1a83f9071f0c54cc8a9.mat

SBL/sub-0051575/label/catROI_sub-0051575_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/v2/3F/MD5E-s188821--56938411eb0b6a69e9bcc61746e2b98c.xml/MD5E-s188821--56938411eb0b6a69e9bcc61746e2b98c.xml

SBL/sub-0051575/label/catROIs_sub-0051575_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/w7/g0/MD5E-s120144--364518becda7b6320c4f162ce7531da5.mat/MD5E-s120144--364518becda7b6320c4f162ce7531da5.mat

SBL/sub-0051575/label/catROIs_sub-0051575_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/23/wG/MD5E-s332098--0621a72248cc3c55def65228dc888ff8.xml/MD5E-s332098--0621a72248cc3c55def65228dc888ff8.xml

SBL/sub-0051575/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

SBL/sub-0051575/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/5k/60/MD5E-s219447--23f019c392ba83a92cea0537468b34dc.nii.gz/MD5E-s219447--23f019c392ba83a92cea0537468b34dc.nii.gz

SBL/sub-0051575/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

SBL/sub-0051575/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/v2/WZ/MD5E-s247319--2fb7e2808d345baac94e16d39ca7837c.nii.gz/MD5E-s247319--2fb7e2808d345baac94e16d39ca7837c.nii.gz

SBL/sub-0051575/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

SBL/sub-0051575/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/VF/6m/MD5E-s310985--3d3fabc8546a339f9330dbea73c4a84f.nii.gz/MD5E-s310985--3d3fabc8546a339f9330dbea73c4a84f.nii.gz

SBL/sub-0051575/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

SBL/sub-0051575/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/37/mK/MD5E-s346307--a53f227df82d5720204215f2dc5d0dcc.nii.gz/MD5E-s346307--a53f227df82d5720204215f2dc5d0dcc.nii.gz

SBL/sub-0051575/mri/Tian_Subcortex_S2_7T_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

SBL/sub-0051575/mri/Tian_Subcortex_S2_7T_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8W/2f/MD5E-s27952--5303ab40518d1fcd8ad770781b7bf37c.nii.gz/MD5E-s27952--5303ab40518d1fcd8ad770781b7bf37c.nii.gz

SBL/sub-0051575/mri/aal3_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

SBL/sub-0051575/mri/aal3_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3P/Xz/MD5E-s246672--195e7c642cc848e1ea96c98efb395091.nii.gz/MD5E-s246672--195e7c642cc848e1ea96c98efb395091.nii.gz

SBL/sub-0051575/mri/anatomy3_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

SBL/sub-0051575/mri/anatomy3_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/f7/7f/MD5E-s177603--f71ebda5539f6d063d36f2fbbf56162d.nii.gz/MD5E-s177603--f71ebda5539f6d063d36f2fbbf56162d.nii.gz

SBL/sub-0051575/mri/anon_misub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xv/z9/MD5E-s6042111--bbebfce63612772dbf2c749fea00985e.nii.gz/MD5E-s6042111--bbebfce63612772dbf2c749fea00985e.nii.gz

SBL/sub-0051575/mri/anon_msub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4G/kw/MD5E-s11621302--357f16c00bdb07ba8844e8702d7f9f5a.nii.gz/MD5E-s11621302--357f16c00bdb07ba8844e8702d7f9f5a.nii.gz

SBL/sub-0051575/mri/cat_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/mp/JZ/MD5E-s134277--d8f7e7ad760ac10a0ca02871b584dcc0.nii.gz/MD5E-s134277--d8f7e7ad760ac10a0ca02871b584dcc0.nii.gz

SBL/sub-0051575/mri/cobra_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

SBL/sub-0051575/mri/cobra_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8v/m4/MD5E-s57649--59b7747ee7260267d8059e2746e67f1a.nii.gz/MD5E-s57649--59b7747ee7260267d8059e2746e67f1a.nii.gz

SBL/sub-0051575/mri/hammers_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

SBL/sub-0051575/mri/hammers_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/MJ/Pv/MD5E-s191240--043e451bf3d4a036650721e4e84a25a3.nii.gz/MD5E-s191240--043e451bf3d4a036650721e4e84a25a3.nii.gz

SBL/sub-0051575/mri/ibsr_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

SBL/sub-0051575/mri/ibsr_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/kx/zk/MD5E-s197863--95b53b3b4c5c565a64cf0f24e152f873.nii.gz/MD5E-s197863--95b53b3b4c5c565a64cf0f24e152f873.nii.gz

SBL/sub-0051575/mri/it_sub-0051575_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/J1/0W/MD5E-s284--323e63877ef1718130fe903862f37e67.mat/MD5E-s284--323e63877ef1718130fe903862f37e67.mat

SBL/sub-0051575/mri/it_sub-0051575_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/6F/WK/MD5E-s283--aabb3302bd47454dbf21ba0057fb3ca1.mat/MD5E-s283--aabb3302bd47454dbf21ba0057fb3ca1.mat

SBL/sub-0051575/mri/iy_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/P3/V5/MD5E-s55495157--8242ed9f53bd1518dcd172d131ecf75a.nii.gz/MD5E-s55495157--8242ed9f53bd1518dcd172d131ecf75a.nii.gz

SBL/sub-0051575/mri/julichbrain_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

SBL/sub-0051575/mri/julichbrain_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/X2/gw/MD5E-s261891--0355310901f58934be753523b6ac44a2.nii.gz/MD5E-s261891--0355310901f58934be753523b6ac44a2.nii.gz

SBL/sub-0051575/mri/lpba40_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

SBL/sub-0051575/mri/lpba40_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4p/Mx/MD5E-s189270--1f013f5d0421a5bb4b6255e616a1ff0e.nii.gz/MD5E-s189270--1f013f5d0421a5bb4b6255e616a1ff0e.nii.gz

SBL/sub-0051575/mri/m0wp1sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Z1/04/MD5E-s2578447--b1f669d1132895915c3ebec7cb1d549a.nii.gz/MD5E-s2578447--b1f669d1132895915c3ebec7cb1d549a.nii.gz

SBL/sub-0051575/mri/m0wp2sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6K/jM/MD5E-s2391546--d322669226527c4602fd98f331927ff5.nii.gz/MD5E-s2391546--d322669226527c4602fd98f331927ff5.nii.gz

SBL/sub-0051575/mri/m0wp3sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/k8/9M/MD5E-s2546675--34f07cbfaeadaf8741ace67757d33c3e.nii.gz/MD5E-s2546675--34f07cbfaeadaf8741ace67757d33c3e.nii.gz

SBL/sub-0051575/mri/mori_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

SBL/sub-0051575/mri/mori_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6m/9X/MD5E-s220666--b2c325e681a7f50f15fcd17c120d233c.nii.gz/MD5E-s220666--b2c325e681a7f50f15fcd17c120d233c.nii.gz

SBL/sub-0051575/mri/mwp1sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1Q/0W/MD5E-s2577212--3764161670958c3f757c79f56911779c.nii.gz/MD5E-s2577212--3764161670958c3f757c79f56911779c.nii.gz

SBL/sub-0051575/mri/mwp2sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/vf/09/MD5E-s2390534--182db50647c27991d68079380bfb5d74.nii.gz/MD5E-s2390534--182db50647c27991d68079380bfb5d74.nii.gz

SBL/sub-0051575/mri/mwp3sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/77/P2/MD5E-s2545521--a9e8526a4f8b322b54c3637c26baa5a2.nii.gz/MD5E-s2545521--a9e8526a4f8b322b54c3637c26baa5a2.nii.gz

SBL/sub-0051575/mri/neuromorphometrics_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

SBL/sub-0051575/mri/neuromorphometrics_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/47/w1/MD5E-s255296--86b7e6163cb9a7e668d16e0a3ab3ce5d.nii.gz/MD5E-s255296--86b7e6163cb9a7e668d16e0a3ab3ce5d.nii.gz

SBL/sub-0051575/mri/p0sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xM/1k/MD5E-s796064--a80337fe31abeb3f0ec4aafad82e10d4.nii.gz/MD5E-s796064--a80337fe31abeb3f0ec4aafad82e10d4.nii.gz

SBL/sub-0051575/mri/p1sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/m6/JF/MD5E-s852156--62f052d89452e7d67d8f1e74df43ce9b.nii.gz/MD5E-s852156--62f052d89452e7d67d8f1e74df43ce9b.nii.gz

SBL/sub-0051575/mri/p2sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jp/05/MD5E-s577751--a9b10648ad9df07d408bd75bd87e022f.nii.gz/MD5E-s577751--a9b10648ad9df07d408bd75bd87e022f.nii.gz

SBL/sub-0051575/mri/p3sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/M5/2G/MD5E-s458219--a6e018a36842662baa8de57e41ab299b.nii.gz/MD5E-s458219--a6e018a36842662baa8de57e41ab299b.nii.gz

SBL/sub-0051575/mri/rp1sub-0051575_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/fj/PP/MD5E-s443172--1ddb37065be66360dd61da59ebdc92d0.nii.gz/MD5E-s443172--1ddb37065be66360dd61da59ebdc92d0.nii.gz

SBL/sub-0051575/mri/rp2sub-0051575_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/14/1k/MD5E-s317860--d0380676cc1af6a7d7fae1fbd3ac7304.nii.gz/MD5E-s317860--d0380676cc1af6a7d7fae1fbd3ac7304.nii.gz

SBL/sub-0051575/mri/rp3sub-0051575_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vx/wV/MD5E-s277613--b1bf65174816f51007ca1d615b7df13f.nii.gz/MD5E-s277613--b1bf65174816f51007ca1d615b7df13f.nii.gz

SBL/sub-0051575/mri/t_sub-0051575_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/z9/Xk/MD5E-s282--a403579ced8026df72c971839a344ff4.mat/MD5E-s282--a403579ced8026df72c971839a344ff4.mat

SBL/sub-0051575/mri/t_sub-0051575_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/J3/9F/MD5E-s284--23d1c617b33cf6b96a14083de6f53275.mat/MD5E-s284--23d1c617b33cf6b96a14083de6f53275.mat

SBL/sub-0051575/mri/thalamus_sub-0051575_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fW/VK/MD5E-s870--1d6eb64a1942214ec592afc1dbf8fbb2.csv/MD5E-s870--1d6eb64a1942214ec592afc1dbf8fbb2.csv

SBL/sub-0051575/mri/thalamus_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051575/mri/wj_sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jg/Ww/MD5E-s5455052--d0e635e06c427fd0ab85202b0c9cf647.nii.gz/MD5E-s5455052--d0e635e06c427fd0ab85202b0c9cf647.nii.gz

SBL/sub-0051575/mri/wmisub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051575/mri/wmsub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9M/VV/MD5E-s1190604--ac5980a25557c9ddc71e86a8ef9c38fb.nii.gz/MD5E-s1190604--ac5980a25557c9ddc71e86a8ef9c38fb.nii.gz

SBL/sub-0051575/mri/wp0sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051575/mri/wp1sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/16/48/MD5E-s580619--12d30e2e4fe3579e81ff32c80c4b6e14.nii.gz/MD5E-s580619--12d30e2e4fe3579e81ff32c80c4b6e14.nii.gz

SBL/sub-0051575/mri/wp2sub-0051575_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Qf/xj/MD5E-s472984--1e603e3204fcceeef10aef6332a98fe5.nii.gz/MD5E-s472984--1e603e3204fcceeef10aef6332a98fe5.nii.gz

SBL/sub-0051575/mri/wp3sub-0051575_T1w.nii.gz

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