[DATALAD RUNCMD] Compute SBL/sub-0051564

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/SBL/sub-0051564/anat/sub-0051564_T1w.nii.gz"
 ],
 "outputs": [
  "SBL/sub-0051564"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

SBL/sub-0051564/label/catROI_sub-0051564_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vk/X2/MD5E-s61444--084a8f586b65d80784eb74d7a88075e0.mat/MD5E-s61444--084a8f586b65d80784eb74d7a88075e0.mat

SBL/sub-0051564/label/catROI_sub-0051564_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/5Z/7g/MD5E-s189127--1db1274feaccf09e3572d29c8570dd93.xml/MD5E-s189127--1db1274feaccf09e3572d29c8570dd93.xml

SBL/sub-0051564/label/catROIs_sub-0051564_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/79/jP/MD5E-s120119--52f9baee1d0baefecec17ad1c61952b1.mat/MD5E-s120119--52f9baee1d0baefecec17ad1c61952b1.mat

SBL/sub-0051564/label/catROIs_sub-0051564_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/wW/qJ/MD5E-s332104--3dd4fd8ace578b5bdcd6c04704a9dae2.xml/MD5E-s332104--3dd4fd8ace578b5bdcd6c04704a9dae2.xml

SBL/sub-0051564/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

SBL/sub-0051564/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/PQ/K1/MD5E-s197159--5c10a3828e25d6e4ec958b6522b2b896.nii.gz/MD5E-s197159--5c10a3828e25d6e4ec958b6522b2b896.nii.gz

SBL/sub-0051564/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

SBL/sub-0051564/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xM/3F/MD5E-s221095--ba23557edeb57ba92379203b8ec88544.nii.gz/MD5E-s221095--ba23557edeb57ba92379203b8ec88544.nii.gz

SBL/sub-0051564/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

SBL/sub-0051564/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1Q/zF/MD5E-s279757--12bb7ca9318428c5c2eaa871f6e29555.nii.gz/MD5E-s279757--12bb7ca9318428c5c2eaa871f6e29555.nii.gz

SBL/sub-0051564/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

SBL/sub-0051564/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/87/Xm/MD5E-s311329--9e2a3590f994c2c1a47fe17869fc4ba7.nii.gz/MD5E-s311329--9e2a3590f994c2c1a47fe17869fc4ba7.nii.gz

SBL/sub-0051564/mri/Tian_Subcortex_S2_7T_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

SBL/sub-0051564/mri/Tian_Subcortex_S2_7T_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7G/2w/MD5E-s25435--9c787e22f36e98b999931f320c99625e.nii.gz/MD5E-s25435--9c787e22f36e98b999931f320c99625e.nii.gz

SBL/sub-0051564/mri/aal3_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

SBL/sub-0051564/mri/aal3_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6M/52/MD5E-s221499--822913fa0a1e23c91eeb54625b5692b2.nii.gz/MD5E-s221499--822913fa0a1e23c91eeb54625b5692b2.nii.gz

SBL/sub-0051564/mri/anatomy3_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

SBL/sub-0051564/mri/anatomy3_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/GQ/wM/MD5E-s156559--b56629396e6d2bb58f86a8806ede687f.nii.gz/MD5E-s156559--b56629396e6d2bb58f86a8806ede687f.nii.gz

SBL/sub-0051564/mri/anon_misub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Zk/Jg/MD5E-s5485331--c63d6e026e57be2c4173d5b0c48aed22.nii.gz/MD5E-s5485331--c63d6e026e57be2c4173d5b0c48aed22.nii.gz

SBL/sub-0051564/mri/anon_msub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Q3/qp/MD5E-s10900228--5a1d3809f4fa952281c79c2ae0aa3e24.nii.gz/MD5E-s10900228--5a1d3809f4fa952281c79c2ae0aa3e24.nii.gz

SBL/sub-0051564/mri/cat_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gX/00/MD5E-s126387--47956c9a444f7be242bd018022d28979.nii.gz/MD5E-s126387--47956c9a444f7be242bd018022d28979.nii.gz

SBL/sub-0051564/mri/cobra_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

SBL/sub-0051564/mri/cobra_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/WG/kK/MD5E-s53247--d7fd48b7b5d68f8f50f181258a5e3e78.nii.gz/MD5E-s53247--d7fd48b7b5d68f8f50f181258a5e3e78.nii.gz

SBL/sub-0051564/mri/hammers_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

SBL/sub-0051564/mri/hammers_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/41/zz/MD5E-s171193--224fcb6d13f34f5b84828353f34d90d6.nii.gz/MD5E-s171193--224fcb6d13f34f5b84828353f34d90d6.nii.gz

SBL/sub-0051564/mri/ibsr_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

SBL/sub-0051564/mri/ibsr_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/FQ/X6/MD5E-s179294--b7850de671ff0239becaf478febb6140.nii.gz/MD5E-s179294--b7850de671ff0239becaf478febb6140.nii.gz

SBL/sub-0051564/mri/it_sub-0051564_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/6p/xW/MD5E-s283--cb87c6fe1011e057606ac4f79d23de2b.mat/MD5E-s283--cb87c6fe1011e057606ac4f79d23de2b.mat

SBL/sub-0051564/mri/it_sub-0051564_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/0X/Fj/MD5E-s285--5a99de66051f2e270f566fea6946a822.mat/MD5E-s285--5a99de66051f2e270f566fea6946a822.mat

SBL/sub-0051564/mri/iy_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/v1/5X/MD5E-s49992340--adfa434256a4f18b98eeec9ecd0639cb.nii.gz/MD5E-s49992340--adfa434256a4f18b98eeec9ecd0639cb.nii.gz

SBL/sub-0051564/mri/julichbrain_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

SBL/sub-0051564/mri/julichbrain_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/F1/kw/MD5E-s233311--7faa645045b87b502369cace66546689.nii.gz/MD5E-s233311--7faa645045b87b502369cace66546689.nii.gz

SBL/sub-0051564/mri/lpba40_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

SBL/sub-0051564/mri/lpba40_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jV/7k/MD5E-s171462--6e1e1f1f59a57e6c42737f41edd96a98.nii.gz/MD5E-s171462--6e1e1f1f59a57e6c42737f41edd96a98.nii.gz

SBL/sub-0051564/mri/m0wp1sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0q/G6/MD5E-s2575211--b41fda03bb485fcf91f747759ba2b9df.nii.gz/MD5E-s2575211--b41fda03bb485fcf91f747759ba2b9df.nii.gz

SBL/sub-0051564/mri/m0wp2sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3v/7M/MD5E-s2415089--468cd7f58068affce54fa8886aae97d5.nii.gz/MD5E-s2415089--468cd7f58068affce54fa8886aae97d5.nii.gz

SBL/sub-0051564/mri/m0wp3sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/P3/3F/MD5E-s2492977--fd6b692c553af8cb8ab57bca4b2d0061.nii.gz/MD5E-s2492977--fd6b692c553af8cb8ab57bca4b2d0061.nii.gz

SBL/sub-0051564/mri/mori_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

SBL/sub-0051564/mri/mori_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/mw/fG/MD5E-s200037--a8acb4bc733e0540cbbbe408def07a7b.nii.gz/MD5E-s200037--a8acb4bc733e0540cbbbe408def07a7b.nii.gz

SBL/sub-0051564/mri/mwp1sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/60/kF/MD5E-s2576781--429a56e89cba30f0eb46de99e1f669e0.nii.gz/MD5E-s2576781--429a56e89cba30f0eb46de99e1f669e0.nii.gz

SBL/sub-0051564/mri/mwp2sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/J4/77/MD5E-s2411344--37526d25961c0620cc0c1b783e30c9ea.nii.gz/MD5E-s2411344--37526d25961c0620cc0c1b783e30c9ea.nii.gz

SBL/sub-0051564/mri/mwp3sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/FF/Wz/MD5E-s2491463--2a76449351624d1e68aa22650c38ac65.nii.gz/MD5E-s2491463--2a76449351624d1e68aa22650c38ac65.nii.gz

SBL/sub-0051564/mri/neuromorphometrics_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

SBL/sub-0051564/mri/neuromorphometrics_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/m8/38/MD5E-s230271--1808eb465e7d07fdd45fff2b4eadc6da.nii.gz/MD5E-s230271--1808eb465e7d07fdd45fff2b4eadc6da.nii.gz

SBL/sub-0051564/mri/p0sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/v0/V2/MD5E-s731760--a7961235e08d808c1694ee1c371794fb.nii.gz/MD5E-s731760--a7961235e08d808c1694ee1c371794fb.nii.gz

SBL/sub-0051564/mri/p1sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/47/P4/MD5E-s784412--067aac10c88947a8ba15901967b8aa46.nii.gz/MD5E-s784412--067aac10c88947a8ba15901967b8aa46.nii.gz

SBL/sub-0051564/mri/p2sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/MG/Qp/MD5E-s535083--d87ccbe6d67cad30e467bc87b30f3de3.nii.gz/MD5E-s535083--d87ccbe6d67cad30e467bc87b30f3de3.nii.gz

SBL/sub-0051564/mri/p3sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/vg/m8/MD5E-s424171--0741cd745065c8b38f93d614c80d45b5.nii.gz/MD5E-s424171--0741cd745065c8b38f93d614c80d45b5.nii.gz

SBL/sub-0051564/mri/rp1sub-0051564_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/vM/fw/MD5E-s450646--eb3bc46a3bf9f6bdcedd873ef221d8b0.nii.gz/MD5E-s450646--eb3bc46a3bf9f6bdcedd873ef221d8b0.nii.gz

SBL/sub-0051564/mri/rp2sub-0051564_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/2Z/vK/MD5E-s328121--fcd40307220a1a363e54e265e1a6f09b.nii.gz/MD5E-s328121--fcd40307220a1a363e54e265e1a6f09b.nii.gz

SBL/sub-0051564/mri/rp3sub-0051564_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3f/ZF/MD5E-s279394--3bf41ca0a062ff2c8889e9d69732db75.nii.gz/MD5E-s279394--3bf41ca0a062ff2c8889e9d69732db75.nii.gz

SBL/sub-0051564/mri/t_sub-0051564_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/61/ZX/MD5E-s283--c407dee1ffe62dfad25478044bd5b050.mat/MD5E-s283--c407dee1ffe62dfad25478044bd5b050.mat

SBL/sub-0051564/mri/t_sub-0051564_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/ZW/73/MD5E-s284--c0e967b8f80c07fcdaaecc3ee0cbedd2.mat/MD5E-s284--c0e967b8f80c07fcdaaecc3ee0cbedd2.mat

SBL/sub-0051564/mri/thalamus_sub-0051564_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fW/VK/MD5E-s870--1d6eb64a1942214ec592afc1dbf8fbb2.csv/MD5E-s870--1d6eb64a1942214ec592afc1dbf8fbb2.csv

SBL/sub-0051564/mri/thalamus_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051564/mri/wj_sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051564/mri/wmisub-0051564_T1w.nii.gz

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SBL/sub-0051564/mri/wmsub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/5k/fK/MD5E-s1174931--5deb236dabcc1cc6580441d3a22220ea.nii.gz/MD5E-s1174931--5deb236dabcc1cc6580441d3a22220ea.nii.gz

SBL/sub-0051564/mri/wp0sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051564/mri/wp1sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/zQ/0M/MD5E-s580688--d926c5590b7f7026de3f4d30dcf892ce.nii.gz/MD5E-s580688--d926c5590b7f7026de3f4d30dcf892ce.nii.gz

SBL/sub-0051564/mri/wp2sub-0051564_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8W/4x/MD5E-s481976--8fd7ac67fb433f414d754c23442caf31.nii.gz/MD5E-s481976--8fd7ac67fb433f414d754c23442caf31.nii.gz

SBL/sub-0051564/mri/wp3sub-0051564_T1w.nii.gz

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