[DATALAD RUNCMD] Compute SBL/sub-0051572

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/SBL/sub-0051572/anat/sub-0051572_T1w.nii.gz"
 ],
 "outputs": [
  "SBL/sub-0051572"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

SBL/sub-0051572/label/catROI_sub-0051572_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/4x/Jj/MD5E-s61379--4aa0bad1179f0d4d59a39e6e1b9c1e56.mat/MD5E-s61379--4aa0bad1179f0d4d59a39e6e1b9c1e56.mat

SBL/sub-0051572/label/catROI_sub-0051572_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/6g/Jj/MD5E-s188852--3e1b9065b753fac67b8fbc05d5dae5d8.xml/MD5E-s188852--3e1b9065b753fac67b8fbc05d5dae5d8.xml

SBL/sub-0051572/label/catROIs_sub-0051572_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/zq/W2/MD5E-s120112--715e747f186aecbbd25b39c93ad147d1.mat/MD5E-s120112--715e747f186aecbbd25b39c93ad147d1.mat

SBL/sub-0051572/label/catROIs_sub-0051572_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/75/M9/MD5E-s332109--64faefb0b39e44b67d69901078543ca3.xml/MD5E-s332109--64faefb0b39e44b67d69901078543ca3.xml

SBL/sub-0051572/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

SBL/sub-0051572/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/p0/WW/MD5E-s199486--fd287776347068d67538a581e131d10e.nii.gz/MD5E-s199486--fd287776347068d67538a581e131d10e.nii.gz

SBL/sub-0051572/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

SBL/sub-0051572/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qM/28/MD5E-s223561--b168fd0b8d565b7b448571b8cc6d131c.nii.gz/MD5E-s223561--b168fd0b8d565b7b448571b8cc6d131c.nii.gz

SBL/sub-0051572/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

SBL/sub-0051572/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/kF/G8/MD5E-s283397--cbb09dfbcbc1709b4c22d507334a00ae.nii.gz/MD5E-s283397--cbb09dfbcbc1709b4c22d507334a00ae.nii.gz

SBL/sub-0051572/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

SBL/sub-0051572/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vw/9m/MD5E-s315053--6288d9912421717f427522024a46be69.nii.gz/MD5E-s315053--6288d9912421717f427522024a46be69.nii.gz

SBL/sub-0051572/mri/Tian_Subcortex_S2_7T_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

SBL/sub-0051572/mri/Tian_Subcortex_S2_7T_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gz/jw/MD5E-s25733--6d1722167966b56fbdbe0b51f3e5501d.nii.gz/MD5E-s25733--6d1722167966b56fbdbe0b51f3e5501d.nii.gz

SBL/sub-0051572/mri/aal3_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

SBL/sub-0051572/mri/aal3_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/86/xm/MD5E-s223471--79cca95d98460aa66b26532745aac51e.nii.gz/MD5E-s223471--79cca95d98460aa66b26532745aac51e.nii.gz

SBL/sub-0051572/mri/anatomy3_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

SBL/sub-0051572/mri/anatomy3_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9J/v6/MD5E-s159843--630cc8109c3b07a792c834cc0fae5735.nii.gz/MD5E-s159843--630cc8109c3b07a792c834cc0fae5735.nii.gz

SBL/sub-0051572/mri/anon_misub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6v/wj/MD5E-s5154542--aa8465f5050a4f8bb72f3f2d257ac7a9.nii.gz/MD5E-s5154542--aa8465f5050a4f8bb72f3f2d257ac7a9.nii.gz

SBL/sub-0051572/mri/anon_msub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jx/k9/MD5E-s10939282--d3ee0df1d0f2b46c46033f5d532f111c.nii.gz/MD5E-s10939282--d3ee0df1d0f2b46c46033f5d532f111c.nii.gz

SBL/sub-0051572/mri/cat_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pv/m1/MD5E-s124829--fab79a597f14a6daae6eba0e31c32726.nii.gz/MD5E-s124829--fab79a597f14a6daae6eba0e31c32726.nii.gz

SBL/sub-0051572/mri/cobra_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

SBL/sub-0051572/mri/cobra_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/wF/Xp/MD5E-s52858--52be59573ab977cc90379a3483221535.nii.gz/MD5E-s52858--52be59573ab977cc90379a3483221535.nii.gz

SBL/sub-0051572/mri/hammers_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

SBL/sub-0051572/mri/hammers_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/GW/ZZ/MD5E-s173844--49cb9cad16429842e595078d5ea22b42.nii.gz/MD5E-s173844--49cb9cad16429842e595078d5ea22b42.nii.gz

SBL/sub-0051572/mri/ibsr_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

SBL/sub-0051572/mri/ibsr_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/VM/Mp/MD5E-s180099--ba5a2607953cc6b2ec42b186332364b8.nii.gz/MD5E-s180099--ba5a2607953cc6b2ec42b186332364b8.nii.gz

SBL/sub-0051572/mri/it_sub-0051572_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pg/vp/MD5E-s282--e1cc17bea1f37b7cba39d6829b96d8d1.mat/MD5E-s282--e1cc17bea1f37b7cba39d6829b96d8d1.mat

SBL/sub-0051572/mri/it_sub-0051572_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/3q/PV/MD5E-s283--a5cae8e7a2311385b0e82ced4f404ae5.mat/MD5E-s283--a5cae8e7a2311385b0e82ced4f404ae5.mat

SBL/sub-0051572/mri/iy_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/17/07/MD5E-s48664694--529be03c6167e7364d4e367cd4b5c7a5.nii.gz/MD5E-s48664694--529be03c6167e7364d4e367cd4b5c7a5.nii.gz

SBL/sub-0051572/mri/julichbrain_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

SBL/sub-0051572/mri/julichbrain_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/16/fw/MD5E-s236973--8f39d845e89bba7cdfe73a1d2f885c93.nii.gz/MD5E-s236973--8f39d845e89bba7cdfe73a1d2f885c93.nii.gz

SBL/sub-0051572/mri/lpba40_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

SBL/sub-0051572/mri/lpba40_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/5Q/9z/MD5E-s171273--5aa855a856685894899ac28bcf0a12a4.nii.gz/MD5E-s171273--5aa855a856685894899ac28bcf0a12a4.nii.gz

SBL/sub-0051572/mri/m0wp1sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/MX/WQ/MD5E-s2580548--5291af953eb8b2b5db6d0047e6cf37c7.nii.gz/MD5E-s2580548--5291af953eb8b2b5db6d0047e6cf37c7.nii.gz

SBL/sub-0051572/mri/m0wp2sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9K/Vg/MD5E-s2375280--910ecd0f5cd6434d34cd420209ecd854.nii.gz/MD5E-s2375280--910ecd0f5cd6434d34cd420209ecd854.nii.gz

SBL/sub-0051572/mri/m0wp3sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/vQ/g9/MD5E-s2497937--aba9940f68149c5fc3eb16ca5c20b1d3.nii.gz/MD5E-s2497937--aba9940f68149c5fc3eb16ca5c20b1d3.nii.gz

SBL/sub-0051572/mri/mori_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

SBL/sub-0051572/mri/mori_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0z/gW/MD5E-s202720--39d876bde57b2eb4ccbd946214a312fd.nii.gz/MD5E-s202720--39d876bde57b2eb4ccbd946214a312fd.nii.gz

SBL/sub-0051572/mri/mwp1sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/2j/Zk/MD5E-s2583247--85b2f0da668ab9ac8faf4c7ea99f01d0.nii.gz/MD5E-s2583247--85b2f0da668ab9ac8faf4c7ea99f01d0.nii.gz

SBL/sub-0051572/mri/mwp2sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/x9/7g/MD5E-s2372124--c78b0f27d3e6c3777348e3c8146cda5b.nii.gz/MD5E-s2372124--c78b0f27d3e6c3777348e3c8146cda5b.nii.gz

SBL/sub-0051572/mri/mwp3sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4J/VK/MD5E-s2497430--fb6f8ecc304a4a8ad758258181f8e521.nii.gz/MD5E-s2497430--fb6f8ecc304a4a8ad758258181f8e521.nii.gz

SBL/sub-0051572/mri/neuromorphometrics_sub-0051572_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

SBL/sub-0051572/mri/neuromorphometrics_sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/m5/9J/MD5E-s232685--a4b42742c1e038af9b4cca181bef2a4e.nii.gz/MD5E-s232685--a4b42742c1e038af9b4cca181bef2a4e.nii.gz

SBL/sub-0051572/mri/p0sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8m/K3/MD5E-s719054--e304b70bbadde7bbc5360b1258d80ed5.nii.gz/MD5E-s719054--e304b70bbadde7bbc5360b1258d80ed5.nii.gz

SBL/sub-0051572/mri/p1sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jm/77/MD5E-s767822--0786946b05af338faaa3de8784b0e6f2.nii.gz/MD5E-s767822--0786946b05af338faaa3de8784b0e6f2.nii.gz

SBL/sub-0051572/mri/p2sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1q/wX/MD5E-s513551--99ffaf5c58efb0f30b99d33cc0d662a1.nii.gz/MD5E-s513551--99ffaf5c58efb0f30b99d33cc0d662a1.nii.gz

SBL/sub-0051572/mri/p3sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051572/mri/rp1sub-0051572_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/K1/16/MD5E-s450735--d7783a2b3a3da8ef2760c1faef873472.nii.gz/MD5E-s450735--d7783a2b3a3da8ef2760c1faef873472.nii.gz

SBL/sub-0051572/mri/rp2sub-0051572_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Z6/gz/MD5E-s318611--80bac8fdceeaddcc89ce711e66fb0f0b.nii.gz/MD5E-s318611--80bac8fdceeaddcc89ce711e66fb0f0b.nii.gz

SBL/sub-0051572/mri/rp3sub-0051572_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/wf/j6/MD5E-s283041--b22398af6ffcd4522dbde14b1fc371e6.nii.gz/MD5E-s283041--b22398af6ffcd4522dbde14b1fc371e6.nii.gz

SBL/sub-0051572/mri/t_sub-0051572_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/J4/pP/MD5E-s283--a3ad1b75671b306a0ad396cff799bb3e.mat/MD5E-s283--a3ad1b75671b306a0ad396cff799bb3e.mat

SBL/sub-0051572/mri/t_sub-0051572_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/V9/x1/MD5E-s284--b66a97cbe7e2d69cd867376f6ff7cfb8.mat/MD5E-s284--b66a97cbe7e2d69cd867376f6ff7cfb8.mat

SBL/sub-0051572/mri/thalamus_sub-0051572_T1w.csv

@@ -0,0 +1 @@
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SBL/sub-0051572/mri/thalamus_sub-0051572_T1w.nii.gz

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SBL/sub-0051572/mri/wj_sub-0051572_T1w.nii.gz

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SBL/sub-0051572/mri/wmisub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051572/mri/wmsub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051572/mri/wp0sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051572/mri/wp1sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/m0/41/MD5E-s580649--ffc2810f723f68ccaf71c96aa655fa66.nii.gz/MD5E-s580649--ffc2810f723f68ccaf71c96aa655fa66.nii.gz

SBL/sub-0051572/mri/wp2sub-0051572_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051572/mri/wp3sub-0051572_T1w.nii.gz

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