[DATALAD RUNCMD] Compute MaxMun_a/sub-0051371

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/MaxMun_a/sub-0051371/anat/sub-0051371_T1w.nii.gz"
 ],
 "outputs": [
  "MaxMun_a/sub-0051371"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

MaxMun_a/sub-0051371/label/catROI_sub-0051371_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Px/qp/MD5E-s57860--e73fc7541cdffa3b4170b854537e7d69.mat/MD5E-s57860--e73fc7541cdffa3b4170b854537e7d69.mat

MaxMun_a/sub-0051371/label/catROI_sub-0051371_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/wX/Mf/MD5E-s188799--b8119aab472cf6477c1ae8c4b26ba384.xml/MD5E-s188799--b8119aab472cf6477c1ae8c4b26ba384.xml

MaxMun_a/sub-0051371/label/catROIs_sub-0051371_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/gF/K6/MD5E-s120137--0ffae84d5f579649ee9d4932831f0adc.mat/MD5E-s120137--0ffae84d5f579649ee9d4932831f0adc.mat

MaxMun_a/sub-0051371/label/catROIs_sub-0051371_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/mz/GM/MD5E-s332151--034121b6e6aa25715b74170043e6be2b.xml/MD5E-s332151--034121b6e6aa25715b74170043e6be2b.xml

MaxMun_a/sub-0051371/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051371_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

MaxMun_a/sub-0051371/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/5F/J6/MD5E-s163216--76142277b881ce5721a717a0d0e31095.nii.gz/MD5E-s163216--76142277b881ce5721a717a0d0e31095.nii.gz

MaxMun_a/sub-0051371/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051371_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

MaxMun_a/sub-0051371/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8j/j6/MD5E-s182263--631ef4e1e98163c6e80279ae4de63199.nii.gz/MD5E-s182263--631ef4e1e98163c6e80279ae4de63199.nii.gz

MaxMun_a/sub-0051371/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051371_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

MaxMun_a/sub-0051371/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/f7/KZ/MD5E-s246762--99529ac45792734b74afe0f91b06c622.nii.gz/MD5E-s246762--99529ac45792734b74afe0f91b06c622.nii.gz

MaxMun_a/sub-0051371/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051371_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

MaxMun_a/sub-0051371/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9M/Kp/MD5E-s273700--cfe2696404dd6ec8302d4c5e7040e3bb.nii.gz/MD5E-s273700--cfe2696404dd6ec8302d4c5e7040e3bb.nii.gz

MaxMun_a/sub-0051371/mri/Tian_Subcortex_S2_7T_sub-0051371_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

MaxMun_a/sub-0051371/mri/Tian_Subcortex_S2_7T_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Qz/5P/MD5E-s22625--3ff44cad3688f3ea1a3a83be2f286393.nii.gz/MD5E-s22625--3ff44cad3688f3ea1a3a83be2f286393.nii.gz

MaxMun_a/sub-0051371/mri/aal3_sub-0051371_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

MaxMun_a/sub-0051371/mri/aal3_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051371/mri/anatomy3_sub-0051371_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

MaxMun_a/sub-0051371/mri/anatomy3_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/p1/Xz/MD5E-s133004--14f502f24b77d947178dd650cb71260e.nii.gz/MD5E-s133004--14f502f24b77d947178dd650cb71260e.nii.gz

MaxMun_a/sub-0051371/mri/anon_misub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3j/jW/MD5E-s4639572--231b8ae0e66c1dedd15a649d59f737bb.nii.gz/MD5E-s4639572--231b8ae0e66c1dedd15a649d59f737bb.nii.gz

MaxMun_a/sub-0051371/mri/anon_msub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9w/45/MD5E-s8560909--5ba408a08b3cec357edbacd4106ebaa8.nii.gz/MD5E-s8560909--5ba408a08b3cec357edbacd4106ebaa8.nii.gz

MaxMun_a/sub-0051371/mri/cat_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/P6/Kv/MD5E-s99857--4d16890525face76a8615404412d88cf.nii.gz/MD5E-s99857--4d16890525face76a8615404412d88cf.nii.gz

MaxMun_a/sub-0051371/mri/cobra_sub-0051371_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

MaxMun_a/sub-0051371/mri/cobra_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/81/MD5E-s46228--6c9b0cb2553b8aef3aa080f6338fe225.nii.gz/MD5E-s46228--6c9b0cb2553b8aef3aa080f6338fe225.nii.gz

MaxMun_a/sub-0051371/mri/hammers_sub-0051371_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

MaxMun_a/sub-0051371/mri/hammers_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gp/Fq/MD5E-s146130--c047383864e37ab2b4d998f17a6b4366.nii.gz/MD5E-s146130--c047383864e37ab2b4d998f17a6b4366.nii.gz

MaxMun_a/sub-0051371/mri/ibsr_sub-0051371_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

MaxMun_a/sub-0051371/mri/ibsr_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pF/Mj/MD5E-s154565--8b6caa62afdb5810d3afe0f378c79c1a.nii.gz/MD5E-s154565--8b6caa62afdb5810d3afe0f378c79c1a.nii.gz

MaxMun_a/sub-0051371/mri/it_sub-0051371_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/4j/8x/MD5E-s284--9e34852bd8d01de0feb7f3fa2a499531.mat/MD5E-s284--9e34852bd8d01de0feb7f3fa2a499531.mat

MaxMun_a/sub-0051371/mri/it_sub-0051371_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/JP/Q3/MD5E-s282--1f212e121aa41166fa594f7e80540eee.mat/MD5E-s282--1f212e121aa41166fa594f7e80540eee.mat

MaxMun_a/sub-0051371/mri/iy_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6f/Jf/MD5E-s45378495--67f33b724a59763fec6b6b131f350723.nii.gz/MD5E-s45378495--67f33b724a59763fec6b6b131f350723.nii.gz

MaxMun_a/sub-0051371/mri/julichbrain_sub-0051371_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

MaxMun_a/sub-0051371/mri/julichbrain_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/G5/Z0/MD5E-s196394--ea87488432cbc5188cf895b759acdcd3.nii.gz/MD5E-s196394--ea87488432cbc5188cf895b759acdcd3.nii.gz

MaxMun_a/sub-0051371/mri/lpba40_sub-0051371_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

MaxMun_a/sub-0051371/mri/lpba40_sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/kP/1J/MD5E-s142868--0aa1a817c802e76f5f8975254b8ccae8.nii.gz/MD5E-s142868--0aa1a817c802e76f5f8975254b8ccae8.nii.gz

MaxMun_a/sub-0051371/mri/m0wp1sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/60/Wj/MD5E-s2594869--115e2769065cf1f9f09b8090bc3ee33e.nii.gz/MD5E-s2594869--115e2769065cf1f9f09b8090bc3ee33e.nii.gz

MaxMun_a/sub-0051371/mri/m0wp2sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3P/PF/MD5E-s2305664--2287f37f828e31caed05a4e1a29e67b8.nii.gz/MD5E-s2305664--2287f37f828e31caed05a4e1a29e67b8.nii.gz

MaxMun_a/sub-0051371/mri/m0wp3sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9Q/W5/MD5E-s2605198--3c9b06e03ba80ac328f375a277d3d00e.nii.gz/MD5E-s2605198--3c9b06e03ba80ac328f375a277d3d00e.nii.gz

MaxMun_a/sub-0051371/mri/mori_sub-0051371_T1w.csv

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MaxMun_a/sub-0051371/mri/mori_sub-0051371_T1w.nii.gz

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+../../../.git/annex/objects/kZ/vG/MD5E-s173966--9936013ba0d10f1704e51ba78e600a5c.nii.gz/MD5E-s173966--9936013ba0d10f1704e51ba78e600a5c.nii.gz

MaxMun_a/sub-0051371/mri/mwp1sub-0051371_T1w.nii.gz

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MaxMun_a/sub-0051371/mri/mwp2sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/GZ/vW/MD5E-s2298657--304cfff88af8eafd66d4f9e00460f8c7.nii.gz/MD5E-s2298657--304cfff88af8eafd66d4f9e00460f8c7.nii.gz

MaxMun_a/sub-0051371/mri/mwp3sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qF/P1/MD5E-s2602035--7f81ca6c925c4c3405db91f0a75ff49d.nii.gz/MD5E-s2602035--7f81ca6c925c4c3405db91f0a75ff49d.nii.gz

MaxMun_a/sub-0051371/mri/neuromorphometrics_sub-0051371_T1w.csv

@@ -0,0 +1 @@
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MaxMun_a/sub-0051371/mri/neuromorphometrics_sub-0051371_T1w.nii.gz

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MaxMun_a/sub-0051371/mri/p0sub-0051371_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xw/KW/MD5E-s652307--682614469702cf9e09bbc0be7224ef24.nii.gz/MD5E-s652307--682614469702cf9e09bbc0be7224ef24.nii.gz

MaxMun_a/sub-0051371/mri/p1sub-0051371_T1w.nii.gz

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MaxMun_a/sub-0051371/mri/p2sub-0051371_T1w.nii.gz

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MaxMun_a/sub-0051371/mri/p3sub-0051371_T1w.nii.gz

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MaxMun_a/sub-0051371/mri/rp1sub-0051371_T1w_affine.nii.gz

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MaxMun_a/sub-0051371/mri/rp2sub-0051371_T1w_affine.nii.gz

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MaxMun_a/sub-0051371/mri/rp3sub-0051371_T1w_affine.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051371/mri/t_sub-0051371_T1w_affine_reorient.mat

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MaxMun_a/sub-0051371/mri/t_sub-0051371_T1w_rigid_reorient.mat

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MaxMun_a/sub-0051371/mri/thalamus_sub-0051371_T1w.csv

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MaxMun_a/sub-0051371/mri/thalamus_sub-0051371_T1w.nii.gz

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MaxMun_a/sub-0051371/mri/wj_sub-0051371_T1w.nii.gz

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MaxMun_a/sub-0051371/mri/wmisub-0051371_T1w.nii.gz

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MaxMun_a/sub-0051371/mri/wmsub-0051371_T1w.nii.gz

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MaxMun_a/sub-0051371/mri/wp0sub-0051371_T1w.nii.gz

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MaxMun_a/sub-0051371/mri/wp1sub-0051371_T1w.nii.gz

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MaxMun_a/sub-0051371/mri/wp2sub-0051371_T1w.nii.gz

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MaxMun_a/sub-0051371/mri/wp3sub-0051371_T1w.nii.gz

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