[DATALAD RUNCMD] Compute NYU/sub-0051150

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/NYU/sub-0051150/anat/sub-0051150_T1w.nii.gz"
 ],
 "outputs": [
  "NYU/sub-0051150"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

NYU/sub-0051150/label/catROI_sub-0051150_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/wF/qJ/MD5E-s57960--a0558156d75ecdf9733d30fbe2975a31.mat/MD5E-s57960--a0558156d75ecdf9733d30fbe2975a31.mat

NYU/sub-0051150/label/catROI_sub-0051150_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pk/1f/MD5E-s188769--c1f3453bff797f82b1975db8d0905890.xml/MD5E-s188769--c1f3453bff797f82b1975db8d0905890.xml

NYU/sub-0051150/label/catROIs_sub-0051150_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/wf/mk/MD5E-s120139--71156c5ddb44357ebfe47a1c69c5df07.mat/MD5E-s120139--71156c5ddb44357ebfe47a1c69c5df07.mat

NYU/sub-0051150/label/catROIs_sub-0051150_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/mw/K0/MD5E-s332147--03516059ca21e9049605495704fc3fe3.xml/MD5E-s332147--03516059ca21e9049605495704fc3fe3.xml

NYU/sub-0051150/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051150_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

NYU/sub-0051150/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051150_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9f/0g/MD5E-s151484--552dafe2ff6fc2a41145bb0045b6c2df.nii.gz/MD5E-s151484--552dafe2ff6fc2a41145bb0045b6c2df.nii.gz

NYU/sub-0051150/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051150_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

NYU/sub-0051150/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051150_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/fM/5M/MD5E-s167901--dcec119e7cfc81194ea2069028fe2742.nii.gz/MD5E-s167901--dcec119e7cfc81194ea2069028fe2742.nii.gz

NYU/sub-0051150/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051150_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

NYU/sub-0051150/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051150_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/g0/Wv/MD5E-s225667--0ca1ae73c70a0c0b70c171a989efe093.nii.gz/MD5E-s225667--0ca1ae73c70a0c0b70c171a989efe093.nii.gz

NYU/sub-0051150/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051150_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

NYU/sub-0051150/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051150_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/k3/K7/MD5E-s248976--1e8e0e77d410acfd9c6f646be1196ec3.nii.gz/MD5E-s248976--1e8e0e77d410acfd9c6f646be1196ec3.nii.gz

NYU/sub-0051150/mri/Tian_Subcortex_S2_7T_sub-0051150_T1w.csv

@@ -0,0 +1 @@
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NYU/sub-0051150/mri/Tian_Subcortex_S2_7T_sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/aal3_sub-0051150_T1w.csv

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NYU/sub-0051150/mri/aal3_sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/anatomy3_sub-0051150_T1w.csv

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NYU/sub-0051150/mri/anatomy3_sub-0051150_T1w.nii.gz

@@ -0,0 +1 @@
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NYU/sub-0051150/mri/anon_misub-0051150_T1w.nii.gz

@@ -0,0 +1 @@
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NYU/sub-0051150/mri/anon_msub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/cat_sub-0051150_T1w.nii.gz

@@ -0,0 +1 @@
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NYU/sub-0051150/mri/cobra_sub-0051150_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

NYU/sub-0051150/mri/cobra_sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/hammers_sub-0051150_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

NYU/sub-0051150/mri/hammers_sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/ibsr_sub-0051150_T1w.csv

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NYU/sub-0051150/mri/ibsr_sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/it_sub-0051150_T1w_affine_reorient.mat

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NYU/sub-0051150/mri/it_sub-0051150_T1w_rigid_reorient.mat

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NYU/sub-0051150/mri/iy_sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/julichbrain_sub-0051150_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

NYU/sub-0051150/mri/julichbrain_sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/lpba40_sub-0051150_T1w.csv

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NYU/sub-0051150/mri/lpba40_sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/m0wp1sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/m0wp2sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/m0wp3sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/mori_sub-0051150_T1w.csv

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NYU/sub-0051150/mri/mori_sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/mwp1sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/mwp2sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/mwp3sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/neuromorphometrics_sub-0051150_T1w.csv

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NYU/sub-0051150/mri/neuromorphometrics_sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/p0sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/p1sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/p2sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/p3sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/rp1sub-0051150_T1w_affine.nii.gz

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NYU/sub-0051150/mri/rp2sub-0051150_T1w_affine.nii.gz

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NYU/sub-0051150/mri/rp3sub-0051150_T1w_affine.nii.gz

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NYU/sub-0051150/mri/t_sub-0051150_T1w_affine_reorient.mat

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NYU/sub-0051150/mri/t_sub-0051150_T1w_rigid_reorient.mat

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NYU/sub-0051150/mri/thalamus_sub-0051150_T1w.csv

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NYU/sub-0051150/mri/thalamus_sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/wj_sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/wmisub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/wmsub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/wp0sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/wp1sub-0051150_T1w.nii.gz

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NYU/sub-0051150/mri/wp2sub-0051150_T1w.nii.gz

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