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[DATALAD RUNCMD] Compute KKI/sub-0050798

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/KKI/sub-0050798/anat/sub-0050798_T1w.nii.gz"
 ],
 "outputs": [
  "KKI/sub-0050798"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^
Felix Hoffstaedter hai 6 meses
pai
8c4b7e5e26
achega
35eee64e1d
Modificáronse 100 ficheiros con 99 adicións e 0 borrados
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  1. 1 0
      KKI/sub-0050798/label/catROI_sub-0050798_T1w.mat
  2. 1 0
      KKI/sub-0050798/label/catROI_sub-0050798_T1w.xml
  3. 1 0
      KKI/sub-0050798/label/catROIs_sub-0050798_T1w.mat
  4. 1 0
      KKI/sub-0050798/label/catROIs_sub-0050798_T1w.xml
  5. 1 0
      KKI/sub-0050798/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050798_T1w.csv
  6. 1 0
      KKI/sub-0050798/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050798_T1w.nii.gz
  7. 1 0
      KKI/sub-0050798/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050798_T1w.csv
  8. 1 0
      KKI/sub-0050798/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050798_T1w.nii.gz
  9. 1 0
      KKI/sub-0050798/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050798_T1w.csv
  10. 1 0
      KKI/sub-0050798/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050798_T1w.nii.gz
  11. 1 0
      KKI/sub-0050798/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050798_T1w.csv
  12. 1 0
      KKI/sub-0050798/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050798_T1w.nii.gz
  13. 1 0
      KKI/sub-0050798/mri/Tian_Subcortex_S2_7T_sub-0050798_T1w.csv
  14. 1 0
      KKI/sub-0050798/mri/Tian_Subcortex_S2_7T_sub-0050798_T1w.nii.gz
  15. 1 0
      KKI/sub-0050798/mri/aal3_sub-0050798_T1w.csv
  16. 1 0
      KKI/sub-0050798/mri/aal3_sub-0050798_T1w.nii.gz
  17. 1 0
      KKI/sub-0050798/mri/anatomy3_sub-0050798_T1w.csv
  18. 1 0
      KKI/sub-0050798/mri/anatomy3_sub-0050798_T1w.nii.gz
  19. 1 0
      KKI/sub-0050798/mri/anon_misub-0050798_T1w.nii.gz
  20. 1 0
      KKI/sub-0050798/mri/anon_msub-0050798_T1w.nii.gz
  21. 1 0
      KKI/sub-0050798/mri/cat_sub-0050798_T1w.nii.gz
  22. 1 0
      KKI/sub-0050798/mri/cobra_sub-0050798_T1w.csv
  23. 1 0
      KKI/sub-0050798/mri/cobra_sub-0050798_T1w.nii.gz
  24. 1 0
      KKI/sub-0050798/mri/hammers_sub-0050798_T1w.csv
  25. 1 0
      KKI/sub-0050798/mri/hammers_sub-0050798_T1w.nii.gz
  26. 1 0
      KKI/sub-0050798/mri/ibsr_sub-0050798_T1w.csv
  27. 1 0
      KKI/sub-0050798/mri/ibsr_sub-0050798_T1w.nii.gz
  28. 1 0
      KKI/sub-0050798/mri/it_sub-0050798_T1w_affine_reorient.mat
  29. 1 0
      KKI/sub-0050798/mri/it_sub-0050798_T1w_rigid_reorient.mat
  30. 1 0
      KKI/sub-0050798/mri/iy_sub-0050798_T1w.nii.gz
  31. 1 0
      KKI/sub-0050798/mri/julichbrain_sub-0050798_T1w.csv
  32. 1 0
      KKI/sub-0050798/mri/julichbrain_sub-0050798_T1w.nii.gz
  33. 1 0
      KKI/sub-0050798/mri/lpba40_sub-0050798_T1w.csv
  34. 1 0
      KKI/sub-0050798/mri/lpba40_sub-0050798_T1w.nii.gz
  35. 1 0
      KKI/sub-0050798/mri/m0wp1sub-0050798_T1w.nii.gz
  36. 1 0
      KKI/sub-0050798/mri/m0wp2sub-0050798_T1w.nii.gz
  37. 1 0
      KKI/sub-0050798/mri/m0wp3sub-0050798_T1w.nii.gz
  38. 1 0
      KKI/sub-0050798/mri/mori_sub-0050798_T1w.csv
  39. 1 0
      KKI/sub-0050798/mri/mori_sub-0050798_T1w.nii.gz
  40. 1 0
      KKI/sub-0050798/mri/mwp1sub-0050798_T1w.nii.gz
  41. 1 0
      KKI/sub-0050798/mri/mwp2sub-0050798_T1w.nii.gz
  42. 1 0
      KKI/sub-0050798/mri/mwp3sub-0050798_T1w.nii.gz
  43. 1 0
      KKI/sub-0050798/mri/neuromorphometrics_sub-0050798_T1w.csv
  44. 1 0
      KKI/sub-0050798/mri/neuromorphometrics_sub-0050798_T1w.nii.gz
  45. 1 0
      KKI/sub-0050798/mri/p0sub-0050798_T1w.nii.gz
  46. 1 0
      KKI/sub-0050798/mri/p1sub-0050798_T1w.nii.gz
  47. 1 0
      KKI/sub-0050798/mri/p2sub-0050798_T1w.nii.gz
  48. 1 0
      KKI/sub-0050798/mri/p3sub-0050798_T1w.nii.gz
  49. 1 0
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  50. 1 0
      KKI/sub-0050798/mri/rp2sub-0050798_T1w_affine.nii.gz
  51. 1 0
      KKI/sub-0050798/mri/rp3sub-0050798_T1w_affine.nii.gz
  52. 1 0
      KKI/sub-0050798/mri/t_sub-0050798_T1w_affine_reorient.mat
  53. 1 0
      KKI/sub-0050798/mri/t_sub-0050798_T1w_rigid_reorient.mat
  54. 1 0
      KKI/sub-0050798/mri/thalamus_sub-0050798_T1w.csv
  55. 1 0
      KKI/sub-0050798/mri/thalamus_sub-0050798_T1w.nii.gz
  56. 1 0
      KKI/sub-0050798/mri/wj_sub-0050798_T1w.nii.gz
  57. 1 0
      KKI/sub-0050798/mri/wmisub-0050798_T1w.nii.gz
  58. 1 0
      KKI/sub-0050798/mri/wmsub-0050798_T1w.nii.gz
  59. 1 0
      KKI/sub-0050798/mri/wp0sub-0050798_T1w.nii.gz
  60. 1 0
      KKI/sub-0050798/mri/wp1sub-0050798_T1w.nii.gz
  61. 1 0
      KKI/sub-0050798/mri/wp2sub-0050798_T1w.nii.gz
  62. 1 0
      KKI/sub-0050798/mri/wp3sub-0050798_T1w.nii.gz
  63. 1 0
      KKI/sub-0050798/mri/y_sub-0050798_T1w.nii.gz
  64. 1 0
      KKI/sub-0050798/report/cat_sub-0050798_T1w.mat
  65. 1 0
      KKI/sub-0050798/report/cat_sub-0050798_T1w.xml
  66. 1 0
      KKI/sub-0050798/report/catlog_sub-0050798_T1w.nii.txt
  67. 1 0
      KKI/sub-0050798/report/catreport_sub-0050798_T1w.pdf
  68. 1 0
      KKI/sub-0050798/report/catreportj_sub-0050798_T1w.jpg
  69. 1 0
      KKI/sub-0050798/surf/lh.area.sub-0050798_T1w
  70. 1 0
      KKI/sub-0050798/surf/lh.central.sub-0050798_T1w.gii
  71. 1 0
      KKI/sub-0050798/surf/lh.depth.sub-0050798_T1w
  72. 1 0
      KKI/sub-0050798/surf/lh.edgemap32k.sub-0050798_T1w.mat
  73. 1 0
      KKI/sub-0050798/surf/lh.fractaldimension.sub-0050798_T1w
  74. 1 0
      KKI/sub-0050798/surf/lh.gmv.sub-0050798_T1w
  75. 1 0
      KKI/sub-0050798/surf/lh.gyrification.sub-0050798_T1w
  76. 1 0
      KKI/sub-0050798/surf/lh.pbt.sub-0050798_T1w
  77. 1 0
      KKI/sub-0050798/surf/lh.sphere.reg.sub-0050798_T1w.gii
  78. 1 0
      KKI/sub-0050798/surf/lh.sphere.sub-0050798_T1w.gii
  79. 1 0
      KKI/sub-0050798/surf/lh.thickness.sub-0050798_T1w
  80. 1 0
      KKI/sub-0050798/surf/lh.toroGI20mm.sub-0050798_T1w
  81. 1 0
      KKI/sub-0050798/surf/rh.area.sub-0050798_T1w
  82. 1 0
      KKI/sub-0050798/surf/rh.central.sub-0050798_T1w.gii
  83. 1 0
      KKI/sub-0050798/surf/rh.depth.sub-0050798_T1w
  84. 1 0
      KKI/sub-0050798/surf/rh.edgemap32k.sub-0050798_T1w.mat
  85. 1 0
      KKI/sub-0050798/surf/rh.fractaldimension.sub-0050798_T1w
  86. 1 0
      KKI/sub-0050798/surf/rh.gmv.sub-0050798_T1w
  87. 1 0
      KKI/sub-0050798/surf/rh.gyrification.sub-0050798_T1w
  88. 1 0
      KKI/sub-0050798/surf/rh.pbt.sub-0050798_T1w
  89. 1 0
      KKI/sub-0050798/surf/rh.sphere.reg.sub-0050798_T1w.gii
  90. 1 0
      KKI/sub-0050798/surf/rh.sphere.sub-0050798_T1w.gii
  91. 1 0
      KKI/sub-0050798/surf/rh.thickness.sub-0050798_T1w
  92. 1 0
      KKI/sub-0050798/surf/rh.toroGI20mm.sub-0050798_T1w
  93. 1 0
      KKI/sub-0050798/surf/s12.mesh.thickness.resampled_32k.sub-0050798_T1w.dat
  94. 1 0
      KKI/sub-0050798/surf/s12.mesh.thickness.resampled_32k.sub-0050798_T1w.gii
  95. 1 0
      KKI/sub-0050798/surf/s22.mesh.area.resampled_32k.sub-0050798_T1w.dat
  96. 1 0
      KKI/sub-0050798/surf/s22.mesh.area.resampled_32k.sub-0050798_T1w.gii
  97. 1 0
      KKI/sub-0050798/surf/s22.mesh.depth.resampled_32k.sub-0050798_T1w.dat
  98. 1 0
      KKI/sub-0050798/surf/s22.mesh.depth.resampled_32k.sub-0050798_T1w.gii
  99. 1 0
      KKI/sub-0050798/surf/s22.mesh.fractaldimension.resampled_32k.sub-0050798_T1w.dat
  100. 0 0
      KKI/sub-0050798/surf/s22.mesh.fractaldimension.resampled_32k.sub-0050798_T1w.gii

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KKI/sub-0050798/label/catROI_sub-0050798_T1w.mat
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+../../../.git/annex/objects/Xg/zM/MD5E-s120145--7f44ac5c122b925499ec8b38c7e62f01.mat/MD5E-s120145--7f44ac5c122b925499ec8b38c7e62f01.mat

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+../../../.git/annex/objects/7Z/3K/MD5E-s332082--e43184fd390ff0cfde8dbb80e62b6a30.xml/MD5E-s332082--e43184fd390ff0cfde8dbb80e62b6a30.xml

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+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

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KKI/sub-0050798/surf/rh.sphere.reg.sub-0050798_T1w.gii
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KKI/sub-0050798/surf/rh.sphere.sub-0050798_T1w.gii
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KKI/sub-0050798/surf/rh.thickness.sub-0050798_T1w
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KKI/sub-0050798/surf/rh.toroGI20mm.sub-0050798_T1w
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KKI/sub-0050798/surf/s12.mesh.thickness.resampled_32k.sub-0050798_T1w.gii
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KKI/sub-0050798/surf/s22.mesh.area.resampled_32k.sub-0050798_T1w.gii
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KKI/sub-0050798/surf/s22.mesh.depth.resampled_32k.sub-0050798_T1w.gii
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KKI/sub-0050798/surf/s22.mesh.fractaldimension.resampled_32k.sub-0050798_T1w.dat
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+../../../.git/annex/objects/VK/4Q/MD5E-s2599264--bd278fbac4f1e927ce108034ea07029c.dat/MD5E-s2599264--bd278fbac4f1e927ce108034ea07029c.dat

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KKI/sub-0050798/surf/s22.mesh.fractaldimension.resampled_32k.sub-0050798_T1w.gii
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