[DATALAD RUNCMD] Compute MaxMun_a/sub-0051366

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/MaxMun_a/sub-0051366/anat/sub-0051366_T1w.nii.gz"
 ],
 "outputs": [
  "MaxMun_a/sub-0051366"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

MaxMun_a/sub-0051366/label/catROI_sub-0051366_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/22/p0/MD5E-s58031--a90da0ba01827370d81cae1b4483f453.mat/MD5E-s58031--a90da0ba01827370d81cae1b4483f453.mat

MaxMun_a/sub-0051366/label/catROI_sub-0051366_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/pP/Zm/MD5E-s188604--f42429c1c54d33a36b9088e11487c80e.xml/MD5E-s188604--f42429c1c54d33a36b9088e11487c80e.xml

MaxMun_a/sub-0051366/label/catROIs_sub-0051366_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/4W/3g/MD5E-s120080--78a25af27792c93148d64d61ee17baf6.mat/MD5E-s120080--78a25af27792c93148d64d61ee17baf6.mat

MaxMun_a/sub-0051366/label/catROIs_sub-0051366_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/J0/8x/MD5E-s332115--b306bf4d31cc050513a61980308c8e2e.xml/MD5E-s332115--b306bf4d31cc050513a61980308c8e2e.xml

MaxMun_a/sub-0051366/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

MaxMun_a/sub-0051366/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/74/81/MD5E-s177199--8eeeba13ccf7b2a37e15eeb9d9de3b9e.nii.gz/MD5E-s177199--8eeeba13ccf7b2a37e15eeb9d9de3b9e.nii.gz

MaxMun_a/sub-0051366/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

MaxMun_a/sub-0051366/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xj/z3/MD5E-s197769--e056e5a85cce85a143fe4a4449287d42.nii.gz/MD5E-s197769--e056e5a85cce85a143fe4a4449287d42.nii.gz

MaxMun_a/sub-0051366/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

MaxMun_a/sub-0051366/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8Q/WQ/MD5E-s267651--f06b9c6093d456484c8daaaed9b37308.nii.gz/MD5E-s267651--f06b9c6093d456484c8daaaed9b37308.nii.gz

MaxMun_a/sub-0051366/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

MaxMun_a/sub-0051366/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/15/6v/MD5E-s297310--b646dba6a635dfcca28529bd136e12e1.nii.gz/MD5E-s297310--b646dba6a635dfcca28529bd136e12e1.nii.gz

MaxMun_a/sub-0051366/mri/Tian_Subcortex_S2_7T_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

MaxMun_a/sub-0051366/mri/Tian_Subcortex_S2_7T_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/5W/z4/MD5E-s23933--8e4be6219d5df4278b6659356c0c2de0.nii.gz/MD5E-s23933--8e4be6219d5df4278b6659356c0c2de0.nii.gz

MaxMun_a/sub-0051366/mri/aal3_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

MaxMun_a/sub-0051366/mri/aal3_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/W3/g3/MD5E-s202579--8632e3445b0559bdf1046d7441130bd6.nii.gz/MD5E-s202579--8632e3445b0559bdf1046d7441130bd6.nii.gz

MaxMun_a/sub-0051366/mri/anatomy3_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

MaxMun_a/sub-0051366/mri/anatomy3_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jq/jW/MD5E-s143929--719c4636e6ad14dbf43de26aded62ca7.nii.gz/MD5E-s143929--719c4636e6ad14dbf43de26aded62ca7.nii.gz

MaxMun_a/sub-0051366/mri/anon_misub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xW/v4/MD5E-s5111646--88c385c01d22bbb409604ce5dd4bd278.nii.gz/MD5E-s5111646--88c385c01d22bbb409604ce5dd4bd278.nii.gz

MaxMun_a/sub-0051366/mri/anon_msub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/ZF/Mq/MD5E-s9468210--8b99ea07c755e59e4d2092260d9a11fe.nii.gz/MD5E-s9468210--8b99ea07c755e59e4d2092260d9a11fe.nii.gz

MaxMun_a/sub-0051366/mri/cat_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/86/Fx/MD5E-s107876--753acf6eaca47cada86ccaa64b454004.nii.gz/MD5E-s107876--753acf6eaca47cada86ccaa64b454004.nii.gz

MaxMun_a/sub-0051366/mri/cobra_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

MaxMun_a/sub-0051366/mri/cobra_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mj/Mj/MD5E-s51370--8435ef72dd5fd28855dc1075b102df7e.nii.gz/MD5E-s51370--8435ef72dd5fd28855dc1075b102df7e.nii.gz

MaxMun_a/sub-0051366/mri/hammers_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

MaxMun_a/sub-0051366/mri/hammers_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1w/9G/MD5E-s160245--355b2502639239dcdf750ec091b081f5.nii.gz/MD5E-s160245--355b2502639239dcdf750ec091b081f5.nii.gz

MaxMun_a/sub-0051366/mri/ibsr_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

MaxMun_a/sub-0051366/mri/ibsr_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xw/9F/MD5E-s166662--ce744e82317d54e022863382b568f9b4.nii.gz/MD5E-s166662--ce744e82317d54e022863382b568f9b4.nii.gz

MaxMun_a/sub-0051366/mri/it_sub-0051366_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/zk/0W/MD5E-s283--211a15a69090b6586fbfa1e40bb64e30.mat/MD5E-s283--211a15a69090b6586fbfa1e40bb64e30.mat

MaxMun_a/sub-0051366/mri/it_sub-0051366_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/x0/0W/MD5E-s282--ee7da46b251b5325136dc931f47b9daa.mat/MD5E-s282--ee7da46b251b5325136dc931f47b9daa.mat

MaxMun_a/sub-0051366/mri/iy_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7M/ZM/MD5E-s51270406--522f17bbad0e6767e44590b08564b8a2.nii.gz/MD5E-s51270406--522f17bbad0e6767e44590b08564b8a2.nii.gz

MaxMun_a/sub-0051366/mri/julichbrain_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

MaxMun_a/sub-0051366/mri/julichbrain_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qK/V3/MD5E-s214592--deee36b4383f9fda47cfb7f48e4623c3.nii.gz/MD5E-s214592--deee36b4383f9fda47cfb7f48e4623c3.nii.gz

MaxMun_a/sub-0051366/mri/lpba40_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

MaxMun_a/sub-0051366/mri/lpba40_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/12/Pj/MD5E-s155491--2ed1f92845ac0582298d17bc0d822203.nii.gz/MD5E-s155491--2ed1f92845ac0582298d17bc0d822203.nii.gz

MaxMun_a/sub-0051366/mri/m0wp1sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/30/8p/MD5E-s2578777--52b90b5a1ff580f95016ebbac94c2eb3.nii.gz/MD5E-s2578777--52b90b5a1ff580f95016ebbac94c2eb3.nii.gz

MaxMun_a/sub-0051366/mri/m0wp2sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7Z/ZK/MD5E-s2292983--bc617e61b8f434af107e3e61ed8a2dc3.nii.gz/MD5E-s2292983--bc617e61b8f434af107e3e61ed8a2dc3.nii.gz

MaxMun_a/sub-0051366/mri/m0wp3sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xX/fM/MD5E-s2570719--8c51962da76fdd955dcf2f42c13c95f0.nii.gz/MD5E-s2570719--8c51962da76fdd955dcf2f42c13c95f0.nii.gz

MaxMun_a/sub-0051366/mri/mori_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

MaxMun_a/sub-0051366/mri/mori_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/mW/Qz/MD5E-s187962--a90d5f9fba3c59ecb49f38c11f58e4ea.nii.gz/MD5E-s187962--a90d5f9fba3c59ecb49f38c11f58e4ea.nii.gz

MaxMun_a/sub-0051366/mri/mwp1sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/q1/zM/MD5E-s2578381--9f9540f22e8800c3097933c8c39ebd57.nii.gz/MD5E-s2578381--9f9540f22e8800c3097933c8c39ebd57.nii.gz

MaxMun_a/sub-0051366/mri/mwp2sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9m/63/MD5E-s2287527--750c0ce14ad9bf7f76afd121bd24d700.nii.gz/MD5E-s2287527--750c0ce14ad9bf7f76afd121bd24d700.nii.gz

MaxMun_a/sub-0051366/mri/mwp3sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0J/x3/MD5E-s2567237--14535d69c4b1f3340457e4799baf5a7f.nii.gz/MD5E-s2567237--14535d69c4b1f3340457e4799baf5a7f.nii.gz

MaxMun_a/sub-0051366/mri/neuromorphometrics_sub-0051366_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

MaxMun_a/sub-0051366/mri/neuromorphometrics_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3f/mK/MD5E-s217487--bc8085de19fa1800b779abeb152f2d2a.nii.gz/MD5E-s217487--bc8085de19fa1800b779abeb152f2d2a.nii.gz

MaxMun_a/sub-0051366/mri/p0sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/WK/pg/MD5E-s723129--861f9e9b9e5dba81d83bab78e5dd7a28.nii.gz/MD5E-s723129--861f9e9b9e5dba81d83bab78e5dd7a28.nii.gz

MaxMun_a/sub-0051366/mri/p1sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/KX/1P/MD5E-s764524--8517118cf0ddb3af150d480283df9baf.nii.gz/MD5E-s764524--8517118cf0ddb3af150d480283df9baf.nii.gz

MaxMun_a/sub-0051366/mri/p2sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/X1/P2/MD5E-s484858--c2b1fe58ac290021d7d02c3b6947f85e.nii.gz/MD5E-s484858--c2b1fe58ac290021d7d02c3b6947f85e.nii.gz

MaxMun_a/sub-0051366/mri/p3sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/Mx/MD5E-s452223--01252c033875a0396ea5840fa8d77f84.nii.gz/MD5E-s452223--01252c033875a0396ea5840fa8d77f84.nii.gz

MaxMun_a/sub-0051366/mri/rp1sub-0051366_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3W/F7/MD5E-s445782--a56b8399a6e3374cfa2c1b2d9b94b1f1.nii.gz/MD5E-s445782--a56b8399a6e3374cfa2c1b2d9b94b1f1.nii.gz

MaxMun_a/sub-0051366/mri/rp2sub-0051366_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qm/MF/MD5E-s295403--82daea3a1b7f57b95b12a001524f9873.nii.gz/MD5E-s295403--82daea3a1b7f57b95b12a001524f9873.nii.gz

MaxMun_a/sub-0051366/mri/rp3sub-0051366_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Qp/wg/MD5E-s300506--4555d3299058b6ce710e9a11274c1b12.nii.gz/MD5E-s300506--4555d3299058b6ce710e9a11274c1b12.nii.gz

MaxMun_a/sub-0051366/mri/t_sub-0051366_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/GP/jj/MD5E-s284--1fdcab8b996252f41890838fb67db44a.mat/MD5E-s284--1fdcab8b996252f41890838fb67db44a.mat

MaxMun_a/sub-0051366/mri/t_sub-0051366_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Gw/WX/MD5E-s282--0f4a0d442a866ccd2975dbfc6a952fec.mat/MD5E-s282--0f4a0d442a866ccd2975dbfc6a952fec.mat

MaxMun_a/sub-0051366/mri/thalamus_sub-0051366_T1w.csv

@@ -0,0 +1 @@
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MaxMun_a/sub-0051366/mri/thalamus_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051366/mri/wj_sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051366/mri/wmisub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/w2/kZ/MD5E-s1220978--660876c83104f590861dcaefd02c1698.nii.gz/MD5E-s1220978--660876c83104f590861dcaefd02c1698.nii.gz

MaxMun_a/sub-0051366/mri/wmsub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051366/mri/wp0sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Wx/wg/MD5E-s521909--9290f9869b506897bb2ef999896a1501.nii.gz/MD5E-s521909--9290f9869b506897bb2ef999896a1501.nii.gz

MaxMun_a/sub-0051366/mri/wp1sub-0051366_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qJ/q6/MD5E-s576135--8ff3d713219011f464081139c06405b7.nii.gz/MD5E-s576135--8ff3d713219011f464081139c06405b7.nii.gz

MaxMun_a/sub-0051366/mri/wp2sub-0051366_T1w.nii.gz

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