[DATALAD RUNCMD] Compute SBL/sub-0051557

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/SBL/sub-0051557/anat/sub-0051557_T1w.nii.gz"
 ],
 "outputs": [
  "SBL/sub-0051557"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

SBL/sub-0051557/label/catROI_sub-0051557_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/4x/g1/MD5E-s61318--2c0ff74c51a54c8d27fcf4a75f48ca79.mat/MD5E-s61318--2c0ff74c51a54c8d27fcf4a75f48ca79.mat

SBL/sub-0051557/label/catROI_sub-0051557_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/33/pM/MD5E-s188730--ae1ef40c22435225e25c576989005a7a.xml/MD5E-s188730--ae1ef40c22435225e25c576989005a7a.xml

SBL/sub-0051557/label/catROIs_sub-0051557_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/49/qM/MD5E-s120165--5ee43fcaa3fb2fb38a35d90fdf7edae7.mat/MD5E-s120165--5ee43fcaa3fb2fb38a35d90fdf7edae7.mat

SBL/sub-0051557/label/catROIs_sub-0051557_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/00/m8/MD5E-s332087--dfb39c22bf3700214ca959a36980ae10.xml/MD5E-s332087--dfb39c22bf3700214ca959a36980ae10.xml

SBL/sub-0051557/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

SBL/sub-0051557/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/51/37/MD5E-s196702--cf8c1b680e8787d8c80b6606e3e299cf.nii.gz/MD5E-s196702--cf8c1b680e8787d8c80b6606e3e299cf.nii.gz

SBL/sub-0051557/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

SBL/sub-0051557/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gv/vX/MD5E-s220395--a6ae28384cf9277e26abf3d24150edc0.nii.gz/MD5E-s220395--a6ae28384cf9277e26abf3d24150edc0.nii.gz

SBL/sub-0051557/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

SBL/sub-0051557/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3M/0g/MD5E-s278779--6abe1ac126b7ea16aa2dcaf1886f2c89.nii.gz/MD5E-s278779--6abe1ac126b7ea16aa2dcaf1886f2c89.nii.gz

SBL/sub-0051557/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

SBL/sub-0051557/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/zF/Q6/MD5E-s309791--ed15430e7efc4e93a61131adcc90c118.nii.gz/MD5E-s309791--ed15430e7efc4e93a61131adcc90c118.nii.gz

SBL/sub-0051557/mri/Tian_Subcortex_S2_7T_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

SBL/sub-0051557/mri/Tian_Subcortex_S2_7T_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Q5/jm/MD5E-s25527--0f0de4ab1b3a3372a90c9b12db5f97ae.nii.gz/MD5E-s25527--0f0de4ab1b3a3372a90c9b12db5f97ae.nii.gz

SBL/sub-0051557/mri/aal3_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

SBL/sub-0051557/mri/aal3_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/F3/Xk/MD5E-s218399--66b9aa61abf8fa74b73c6ae6168b8b58.nii.gz/MD5E-s218399--66b9aa61abf8fa74b73c6ae6168b8b58.nii.gz

SBL/sub-0051557/mri/anatomy3_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

SBL/sub-0051557/mri/anatomy3_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Zx/qg/MD5E-s158072--69e6e6e922f54075d1c66b76a8e091c4.nii.gz/MD5E-s158072--69e6e6e922f54075d1c66b76a8e091c4.nii.gz

SBL/sub-0051557/mri/anon_misub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gv/K0/MD5E-s5150712--fbe6d35d58b9ff137a93db517163dcd7.nii.gz/MD5E-s5150712--fbe6d35d58b9ff137a93db517163dcd7.nii.gz

SBL/sub-0051557/mri/anon_msub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/PF/v7/MD5E-s10731617--a0799b3ac99691c26484b989c6672615.nii.gz/MD5E-s10731617--a0799b3ac99691c26484b989c6672615.nii.gz

SBL/sub-0051557/mri/cat_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pf/PX/MD5E-s119619--82e91c0d4823b6c375eed6c50dc8a6cb.nii.gz/MD5E-s119619--82e91c0d4823b6c375eed6c50dc8a6cb.nii.gz

SBL/sub-0051557/mri/cobra_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

SBL/sub-0051557/mri/cobra_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/fJ/33/MD5E-s53695--c4ba89a0665e5a02b2caa8d04c6c5222.nii.gz/MD5E-s53695--c4ba89a0665e5a02b2caa8d04c6c5222.nii.gz

SBL/sub-0051557/mri/hammers_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

SBL/sub-0051557/mri/hammers_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/58/XK/MD5E-s169456--5203a0200d977b5b24769d5c357bdd09.nii.gz/MD5E-s169456--5203a0200d977b5b24769d5c357bdd09.nii.gz

SBL/sub-0051557/mri/ibsr_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

SBL/sub-0051557/mri/ibsr_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/W9/0f/MD5E-s177228--9e40ee6b019afbb372bf52438c6ab0f3.nii.gz/MD5E-s177228--9e40ee6b019afbb372bf52438c6ab0f3.nii.gz

SBL/sub-0051557/mri/it_sub-0051557_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/kW/xx/MD5E-s282--19b778c4d3ea5a6201e2474643227de7.mat/MD5E-s282--19b778c4d3ea5a6201e2474643227de7.mat

SBL/sub-0051557/mri/it_sub-0051557_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/W6/p8/MD5E-s282--1ec8646d22e562ad7c5a5947d79005f9.mat/MD5E-s282--1ec8646d22e562ad7c5a5947d79005f9.mat

SBL/sub-0051557/mri/iy_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/z7/95/MD5E-s48964883--4ab9e94dc145b734fbb528f015726cd7.nii.gz/MD5E-s48964883--4ab9e94dc145b734fbb528f015726cd7.nii.gz

SBL/sub-0051557/mri/julichbrain_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

SBL/sub-0051557/mri/julichbrain_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/kw/MD5E-s233431--c491c8abd9c06643fb5091ad71071ef7.nii.gz/MD5E-s233431--c491c8abd9c06643fb5091ad71071ef7.nii.gz

SBL/sub-0051557/mri/lpba40_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

SBL/sub-0051557/mri/lpba40_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/p2/Qv/MD5E-s168766--4a0918b9b8f94fbcc400b07562c09663.nii.gz/MD5E-s168766--4a0918b9b8f94fbcc400b07562c09663.nii.gz

SBL/sub-0051557/mri/m0wp1sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Z9/4J/MD5E-s2576213--07a12b2191465e7e92b0da5ef9c62653.nii.gz/MD5E-s2576213--07a12b2191465e7e92b0da5ef9c62653.nii.gz

SBL/sub-0051557/mri/m0wp2sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Fz/X3/MD5E-s2396722--c2c0560e6f2cfe90e6d1446c93499814.nii.gz/MD5E-s2396722--c2c0560e6f2cfe90e6d1446c93499814.nii.gz

SBL/sub-0051557/mri/m0wp3sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/08/V4/MD5E-s2481358--1e64ce9c055e8208c7fef5ccea9f0b0d.nii.gz/MD5E-s2481358--1e64ce9c055e8208c7fef5ccea9f0b0d.nii.gz

SBL/sub-0051557/mri/mori_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

SBL/sub-0051557/mri/mori_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/f9/Fv/MD5E-s196710--b001957e8ee4fcc3eeb41a4590102c67.nii.gz/MD5E-s196710--b001957e8ee4fcc3eeb41a4590102c67.nii.gz

SBL/sub-0051557/mri/mwp1sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jz/3K/MD5E-s2578619--adf0255b2f010628cdf8d5cfaf14a07c.nii.gz/MD5E-s2578619--adf0255b2f010628cdf8d5cfaf14a07c.nii.gz

SBL/sub-0051557/mri/mwp2sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pm/qK/MD5E-s2392815--5aa12536cde847531b02324841639332.nii.gz/MD5E-s2392815--5aa12536cde847531b02324841639332.nii.gz

SBL/sub-0051557/mri/mwp3sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0P/ZW/MD5E-s2479515--fe452d40e48b2bf3b002ed4b9c349937.nii.gz/MD5E-s2479515--fe452d40e48b2bf3b002ed4b9c349937.nii.gz

SBL/sub-0051557/mri/neuromorphometrics_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

SBL/sub-0051557/mri/neuromorphometrics_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/GW/5K/MD5E-s229651--441287afb2d71390614a31304d149ba8.nii.gz/MD5E-s229651--441287afb2d71390614a31304d149ba8.nii.gz

SBL/sub-0051557/mri/p0sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7P/6X/MD5E-s715163--ffe77ec676b487bdcc3ffb9e577c1a34.nii.gz/MD5E-s715163--ffe77ec676b487bdcc3ffb9e577c1a34.nii.gz

SBL/sub-0051557/mri/p1sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/W7/3j/MD5E-s764488--27f3f8e803184f81be58627b60888299.nii.gz/MD5E-s764488--27f3f8e803184f81be58627b60888299.nii.gz

SBL/sub-0051557/mri/p2sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pf/Gv/MD5E-s527137--e770ed9efdc21d62c971103baf7c696a.nii.gz/MD5E-s527137--e770ed9efdc21d62c971103baf7c696a.nii.gz

SBL/sub-0051557/mri/p3sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/2k/qj/MD5E-s406388--accf9c6dc9cd3db302fdad1d7ebf87c0.nii.gz/MD5E-s406388--accf9c6dc9cd3db302fdad1d7ebf87c0.nii.gz

SBL/sub-0051557/mri/rp1sub-0051557_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/qz/Kj/MD5E-s461504--dffdab8d1127225373a62bae03253a57.nii.gz/MD5E-s461504--dffdab8d1127225373a62bae03253a57.nii.gz

SBL/sub-0051557/mri/rp2sub-0051557_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/XW/9G/MD5E-s336373--101767d0ce58c0d86dbc9d7bb1ca5d81.nii.gz/MD5E-s336373--101767d0ce58c0d86dbc9d7bb1ca5d81.nii.gz

SBL/sub-0051557/mri/rp3sub-0051557_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Qf/00/MD5E-s276383--91261f36aa07da2921d0a3568c315f5f.nii.gz/MD5E-s276383--91261f36aa07da2921d0a3568c315f5f.nii.gz

SBL/sub-0051557/mri/t_sub-0051557_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/1x/j0/MD5E-s285--dea7d3c597048bfb3a1a3465aebfd68f.mat/MD5E-s285--dea7d3c597048bfb3a1a3465aebfd68f.mat

SBL/sub-0051557/mri/t_sub-0051557_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/5J/f9/MD5E-s284--0efe71bb8f6c32aa4ccc44daaef70e67.mat/MD5E-s284--0efe71bb8f6c32aa4ccc44daaef70e67.mat

SBL/sub-0051557/mri/thalamus_sub-0051557_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fW/VK/MD5E-s870--1d6eb64a1942214ec592afc1dbf8fbb2.csv/MD5E-s870--1d6eb64a1942214ec592afc1dbf8fbb2.csv

SBL/sub-0051557/mri/thalamus_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051557/mri/wj_sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051557/mri/wmisub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051557/mri/wmsub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051557/mri/wp0sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051557/mri/wp1sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051557/mri/wp2sub-0051557_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051557/mri/wp3sub-0051557_T1w.nii.gz

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