[DATALAD RUNCMD] Compute UM_1/sub-0050320

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/UM_1/sub-0050320/anat/sub-0050320_T1w.nii.gz"
 ],
 "outputs": [
  "UM_1/sub-0050320"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

UM_1/sub-0050320/label/catROI_sub-0050320_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/4j/G8/MD5E-s61399--bdc53f82c9367e10cfdb11926855cd14.mat/MD5E-s61399--bdc53f82c9367e10cfdb11926855cd14.mat

UM_1/sub-0050320/label/catROI_sub-0050320_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/1z/0m/MD5E-s188788--e5db2bd55c95c2751cded9ba0552dabf.xml/MD5E-s188788--e5db2bd55c95c2751cded9ba0552dabf.xml

UM_1/sub-0050320/label/catROIs_sub-0050320_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/g2/m1/MD5E-s120159--92decf4d6adab4be63063c6ab4601f45.mat/MD5E-s120159--92decf4d6adab4be63063c6ab4601f45.mat

UM_1/sub-0050320/label/catROIs_sub-0050320_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pj/zP/MD5E-s332133--5469f012759f5ad6a90912a6470fe77d.xml/MD5E-s332133--5469f012759f5ad6a90912a6470fe77d.xml

UM_1/sub-0050320/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050320_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

UM_1/sub-0050320/mri/Schaefer2018_100Parcels_17Networks_order_sub-0050320_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pk/mf/MD5E-s161992--d3f850db2880b2f5e1b724b339df9171.nii.gz/MD5E-s161992--d3f850db2880b2f5e1b724b339df9171.nii.gz

UM_1/sub-0050320/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050320_T1w.csv

@@ -0,0 +1 @@
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UM_1/sub-0050320/mri/Schaefer2018_200Parcels_17Networks_order_sub-0050320_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/KM/xq/MD5E-s181940--ca1ede24540517c0124cb464504d9792.nii.gz/MD5E-s181940--ca1ede24540517c0124cb464504d9792.nii.gz

UM_1/sub-0050320/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050320_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

UM_1/sub-0050320/mri/Schaefer2018_400Parcels_17Networks_order_sub-0050320_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6p/G0/MD5E-s229172--874727cefcf0abbcad46550e2f22e3aa.nii.gz/MD5E-s229172--874727cefcf0abbcad46550e2f22e3aa.nii.gz

UM_1/sub-0050320/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050320_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

UM_1/sub-0050320/mri/Schaefer2018_600Parcels_17Networks_order_sub-0050320_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/FP/kP/MD5E-s255620--ebffe61b81c3dcbfb2d6a47f328c5ba3.nii.gz/MD5E-s255620--ebffe61b81c3dcbfb2d6a47f328c5ba3.nii.gz

UM_1/sub-0050320/mri/Tian_Subcortex_S2_7T_sub-0050320_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

UM_1/sub-0050320/mri/Tian_Subcortex_S2_7T_sub-0050320_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Fj/2Q/MD5E-s20799--543c90ba7f7e880b8dd4b550876c7f63.nii.gz/MD5E-s20799--543c90ba7f7e880b8dd4b550876c7f63.nii.gz

UM_1/sub-0050320/mri/aal3_sub-0050320_T1w.csv

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UM_1/sub-0050320/mri/aal3_sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/anatomy3_sub-0050320_T1w.csv

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UM_1/sub-0050320/mri/anatomy3_sub-0050320_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Z7/7G/MD5E-s132215--31bc2250fa5b7ed8746757eedd8f743d.nii.gz/MD5E-s132215--31bc2250fa5b7ed8746757eedd8f743d.nii.gz

UM_1/sub-0050320/mri/anon_misub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/anon_msub-0050320_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Wm/3F/MD5E-s9975229--d328ac06fdee8de0484e618d95eec020.nii.gz/MD5E-s9975229--d328ac06fdee8de0484e618d95eec020.nii.gz

UM_1/sub-0050320/mri/cat_sub-0050320_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/q2/M5/MD5E-s104657--eed1b9b49736e26c652c8217677d1e00.nii.gz/MD5E-s104657--eed1b9b49736e26c652c8217677d1e00.nii.gz

UM_1/sub-0050320/mri/cobra_sub-0050320_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

UM_1/sub-0050320/mri/cobra_sub-0050320_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1g/V8/MD5E-s44922--6109de965ec48813023d4322d9134a1d.nii.gz/MD5E-s44922--6109de965ec48813023d4322d9134a1d.nii.gz

UM_1/sub-0050320/mri/hammers_sub-0050320_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

UM_1/sub-0050320/mri/hammers_sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/ibsr_sub-0050320_T1w.csv

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UM_1/sub-0050320/mri/ibsr_sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/it_sub-0050320_T1w_affine_reorient.mat

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UM_1/sub-0050320/mri/it_sub-0050320_T1w_rigid_reorient.mat

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UM_1/sub-0050320/mri/iy_sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/julichbrain_sub-0050320_T1w.csv

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UM_1/sub-0050320/mri/julichbrain_sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/lpba40_sub-0050320_T1w.csv

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UM_1/sub-0050320/mri/lpba40_sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/m0wp1sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/m0wp2sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/m0wp3sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/mori_sub-0050320_T1w.csv

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UM_1/sub-0050320/mri/mori_sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/mwp1sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/mwp2sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/mwp3sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/neuromorphometrics_sub-0050320_T1w.csv

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UM_1/sub-0050320/mri/neuromorphometrics_sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/p0sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/p1sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/p2sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/p3sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/rp1sub-0050320_T1w_affine.nii.gz

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UM_1/sub-0050320/mri/rp2sub-0050320_T1w_affine.nii.gz

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UM_1/sub-0050320/mri/rp3sub-0050320_T1w_affine.nii.gz

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UM_1/sub-0050320/mri/t_sub-0050320_T1w_affine_reorient.mat

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UM_1/sub-0050320/mri/t_sub-0050320_T1w_rigid_reorient.mat

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UM_1/sub-0050320/mri/thalamus_sub-0050320_T1w.csv

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UM_1/sub-0050320/mri/thalamus_sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/wj_sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/wmisub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/wp0sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/wp1sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/wp2sub-0050320_T1w.nii.gz

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UM_1/sub-0050320/mri/wp3sub-0050320_T1w.nii.gz

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