[DATALAD RUNCMD] Compute SBL/sub-0051584

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/SBL/sub-0051584/anat/sub-0051584_T1w.nii.gz"
 ],
 "outputs": [
  "SBL/sub-0051584"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

SBL/sub-0051584/label/catROI_sub-0051584_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/20/0f/MD5E-s61399--500222f38eb074d24c0d01d3fa8cef95.mat/MD5E-s61399--500222f38eb074d24c0d01d3fa8cef95.mat

SBL/sub-0051584/label/catROI_sub-0051584_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/Zk/Pk/MD5E-s188958--44583efb55eb9d9bc906efe8e68300bb.xml/MD5E-s188958--44583efb55eb9d9bc906efe8e68300bb.xml

SBL/sub-0051584/label/catROIs_sub-0051584_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/XZ/5p/MD5E-s120199--b790f8c693971d99ee9ec5615373dd35.mat/MD5E-s120199--b790f8c693971d99ee9ec5615373dd35.mat

SBL/sub-0051584/label/catROIs_sub-0051584_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/zf/W7/MD5E-s332114--e29c8133323c92f4ac81d5852d6718a2.xml/MD5E-s332114--e29c8133323c92f4ac81d5852d6718a2.xml

SBL/sub-0051584/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

SBL/sub-0051584/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8Q/GV/MD5E-s201673--a8ff80492a5add38e26f8be6e4ff5873.nii.gz/MD5E-s201673--a8ff80492a5add38e26f8be6e4ff5873.nii.gz

SBL/sub-0051584/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

SBL/sub-0051584/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/20/QW/MD5E-s225303--e5fcfea7f8c628f468caff2ef437aa55.nii.gz/MD5E-s225303--e5fcfea7f8c628f468caff2ef437aa55.nii.gz

SBL/sub-0051584/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

SBL/sub-0051584/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/wK/Ww/MD5E-s285061--4ed42ffdc2625158dbe1093eecd59955.nii.gz/MD5E-s285061--4ed42ffdc2625158dbe1093eecd59955.nii.gz

SBL/sub-0051584/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

SBL/sub-0051584/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Zq/fz/MD5E-s316753--8f82b2655ce50b1a59a487262611bf12.nii.gz/MD5E-s316753--8f82b2655ce50b1a59a487262611bf12.nii.gz

SBL/sub-0051584/mri/Tian_Subcortex_S2_7T_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

SBL/sub-0051584/mri/Tian_Subcortex_S2_7T_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gF/Mj/MD5E-s26138--ed84ac76b48781cdb3daba7f08439f7b.nii.gz/MD5E-s26138--ed84ac76b48781cdb3daba7f08439f7b.nii.gz

SBL/sub-0051584/mri/aal3_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

SBL/sub-0051584/mri/aal3_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4m/Jp/MD5E-s224298--d1b234fd11dd5ae6f770d6f97fc2482f.nii.gz/MD5E-s224298--d1b234fd11dd5ae6f770d6f97fc2482f.nii.gz

SBL/sub-0051584/mri/anatomy3_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

SBL/sub-0051584/mri/anatomy3_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1w/k4/MD5E-s161563--212cca5a2dc56199d89b1056993f51ad.nii.gz/MD5E-s161563--212cca5a2dc56199d89b1056993f51ad.nii.gz

SBL/sub-0051584/mri/anon_misub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/k6/mZ/MD5E-s5166383--807009435a173a43a9c9ac86a744aeae.nii.gz/MD5E-s5166383--807009435a173a43a9c9ac86a744aeae.nii.gz

SBL/sub-0051584/mri/anon_msub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Wp/zG/MD5E-s10665926--19492b611333dca23e00c860effdf6d4.nii.gz/MD5E-s10665926--19492b611333dca23e00c860effdf6d4.nii.gz

SBL/sub-0051584/mri/cat_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/WV/Q6/MD5E-s130267--259b280eb260b83a34e5446d7c68fa69.nii.gz/MD5E-s130267--259b280eb260b83a34e5446d7c68fa69.nii.gz

SBL/sub-0051584/mri/cobra_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

SBL/sub-0051584/mri/cobra_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8K/Qm/MD5E-s53064--03fe494aacf6ad5780416e3d104edcbf.nii.gz/MD5E-s53064--03fe494aacf6ad5780416e3d104edcbf.nii.gz

SBL/sub-0051584/mri/hammers_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

SBL/sub-0051584/mri/hammers_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/ZZ/vF/MD5E-s176704--fe8411c60952e7b87706fe15a3172a60.nii.gz/MD5E-s176704--fe8411c60952e7b87706fe15a3172a60.nii.gz

SBL/sub-0051584/mri/ibsr_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

SBL/sub-0051584/mri/ibsr_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/92/KX/MD5E-s183111--ddfe78ede588fe0ee1e54b162fb34713.nii.gz/MD5E-s183111--ddfe78ede588fe0ee1e54b162fb34713.nii.gz

SBL/sub-0051584/mri/it_sub-0051584_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/WV/6Z/MD5E-s284--671fe97863d1299444fd061458560088.mat/MD5E-s284--671fe97863d1299444fd061458560088.mat

SBL/sub-0051584/mri/it_sub-0051584_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Kf/Pq/MD5E-s284--b40b7e8b904ea03b47eb33b82d655d05.mat/MD5E-s284--b40b7e8b904ea03b47eb33b82d655d05.mat

SBL/sub-0051584/mri/iy_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0w/F2/MD5E-s50413003--520509cd71abcb59e3c546c36a53c7e3.nii.gz/MD5E-s50413003--520509cd71abcb59e3c546c36a53c7e3.nii.gz

SBL/sub-0051584/mri/julichbrain_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

SBL/sub-0051584/mri/julichbrain_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4F/fX/MD5E-s241166--8cf790e44e827aeaa9ea57d14b09602a.nii.gz/MD5E-s241166--8cf790e44e827aeaa9ea57d14b09602a.nii.gz

SBL/sub-0051584/mri/lpba40_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

SBL/sub-0051584/mri/lpba40_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/32/7F/MD5E-s173603--90d31bb1004799a1a997eb50a5a5bfd7.nii.gz/MD5E-s173603--90d31bb1004799a1a997eb50a5a5bfd7.nii.gz

SBL/sub-0051584/mri/m0wp1sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Q3/JP/MD5E-s2580551--ae1b6772133752d14cd47bfe508f4fbf.nii.gz/MD5E-s2580551--ae1b6772133752d14cd47bfe508f4fbf.nii.gz

SBL/sub-0051584/mri/m0wp2sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/mw/6j/MD5E-s2397569--ffe40133009b833333ee0b52721c5312.nii.gz/MD5E-s2397569--ffe40133009b833333ee0b52721c5312.nii.gz

SBL/sub-0051584/mri/m0wp3sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1G/5J/MD5E-s2517372--23a1bb3308031b144116a46e42919876.nii.gz/MD5E-s2517372--23a1bb3308031b144116a46e42919876.nii.gz

SBL/sub-0051584/mri/mori_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

SBL/sub-0051584/mri/mori_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051584/mri/mwp1sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/1K/MD5E-s2580225--c0cfd1820b63342f94193369995ad3b1.nii.gz/MD5E-s2580225--c0cfd1820b63342f94193369995ad3b1.nii.gz

SBL/sub-0051584/mri/mwp2sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/PZ/MD5E-s2395003--dbf2b0f6334646d286acb1eb66697333.nii.gz/MD5E-s2395003--dbf2b0f6334646d286acb1eb66697333.nii.gz

SBL/sub-0051584/mri/mwp3sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/36/QZ/MD5E-s2514043--2e457af0876cefde66b943d70c0ce2fc.nii.gz/MD5E-s2514043--2e457af0876cefde66b943d70c0ce2fc.nii.gz

SBL/sub-0051584/mri/neuromorphometrics_sub-0051584_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

SBL/sub-0051584/mri/neuromorphometrics_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/q1/3q/MD5E-s233424--b5bc756096e07945dac324de53c93446.nii.gz/MD5E-s233424--b5bc756096e07945dac324de53c93446.nii.gz

SBL/sub-0051584/mri/p0sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/w7/P2/MD5E-s736391--ec1598152f30d85e90e3a3bf546a12fd.nii.gz/MD5E-s736391--ec1598152f30d85e90e3a3bf546a12fd.nii.gz

SBL/sub-0051584/mri/p1sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/PF/QG/MD5E-s783984--a86ae6e0d1dda0b767fb290c7a5d253f.nii.gz/MD5E-s783984--a86ae6e0d1dda0b767fb290c7a5d253f.nii.gz

SBL/sub-0051584/mri/p2sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051584/mri/p3sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/X3/Kv/MD5E-s437079--176d66580bc287b36a38f609fb9a0043.nii.gz/MD5E-s437079--176d66580bc287b36a38f609fb9a0043.nii.gz

SBL/sub-0051584/mri/rp1sub-0051584_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xq/P1/MD5E-s447853--5723bd64fa38e40b6a3c4a0ba1a6facb.nii.gz/MD5E-s447853--5723bd64fa38e40b6a3c4a0ba1a6facb.nii.gz

SBL/sub-0051584/mri/rp2sub-0051584_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/p3/97/MD5E-s328205--5719020820c9673815721ea4cfd842d7.nii.gz/MD5E-s328205--5719020820c9673815721ea4cfd842d7.nii.gz

SBL/sub-0051584/mri/rp3sub-0051584_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/k1/k4/MD5E-s289542--6a9dc05b3d0a2b0b27f63123baf706e5.nii.gz/MD5E-s289542--6a9dc05b3d0a2b0b27f63123baf706e5.nii.gz

SBL/sub-0051584/mri/t_sub-0051584_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Qz/Pg/MD5E-s284--0863716bdb93082db90ee20419248e6c.mat/MD5E-s284--0863716bdb93082db90ee20419248e6c.mat

SBL/sub-0051584/mri/t_sub-0051584_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Gx/wz/MD5E-s285--c1366de57028a9a2c4187b99a191a380.mat/MD5E-s285--c1366de57028a9a2c4187b99a191a380.mat

SBL/sub-0051584/mri/thalamus_sub-0051584_T1w.csv

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SBL/sub-0051584/mri/thalamus_sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051584/mri/wj_sub-0051584_T1w.nii.gz

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SBL/sub-0051584/mri/wmisub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051584/mri/wmsub-0051584_T1w.nii.gz

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SBL/sub-0051584/mri/wp0sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051584/mri/wp1sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051584/mri/wp2sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/XF/m8/MD5E-s477733--575873502c1f55d19554fe8b95e7e7c4.nii.gz/MD5E-s477733--575873502c1f55d19554fe8b95e7e7c4.nii.gz

SBL/sub-0051584/mri/wp3sub-0051584_T1w.nii.gz

@@ -0,0 +1 @@
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SBL/sub-0051584/mri/y_sub-0051584_T1w.nii.gz

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