[DATALAD RUNCMD] Compute MaxMun_a/sub-0051372

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/MaxMun_a/sub-0051372/anat/sub-0051372_T1w.nii.gz"
 ],
 "outputs": [
  "MaxMun_a/sub-0051372"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

MaxMun_a/sub-0051372/label/catROI_sub-0051372_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xx/0x/MD5E-s57813--f56e7a2a262825c382f069ce51f5690c.mat/MD5E-s57813--f56e7a2a262825c382f069ce51f5690c.mat

MaxMun_a/sub-0051372/label/catROI_sub-0051372_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/3w/97/MD5E-s188954--28a117193c65065afef4de6506a4ad44.xml/MD5E-s188954--28a117193c65065afef4de6506a4ad44.xml

MaxMun_a/sub-0051372/label/catROIs_sub-0051372_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/4K/8z/MD5E-s120057--83701a465fea90746965482accac8aee.mat/MD5E-s120057--83701a465fea90746965482accac8aee.mat

MaxMun_a/sub-0051372/label/catROIs_sub-0051372_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/gq/k8/MD5E-s332065--8fb89cb0751a7ee86c34696ca02e9a07.xml/MD5E-s332065--8fb89cb0751a7ee86c34696ca02e9a07.xml

MaxMun_a/sub-0051372/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

MaxMun_a/sub-0051372/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9W/8q/MD5E-s153640--b9a8f5c4398d3fa2e4eed0e068d1fd72.nii.gz/MD5E-s153640--b9a8f5c4398d3fa2e4eed0e068d1fd72.nii.gz

MaxMun_a/sub-0051372/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

MaxMun_a/sub-0051372/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/V3/qF/MD5E-s171793--7cd46a6479594ce6048323c61aadd92f.nii.gz/MD5E-s171793--7cd46a6479594ce6048323c61aadd92f.nii.gz

MaxMun_a/sub-0051372/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

MaxMun_a/sub-0051372/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Q6/zz/MD5E-s231622--3fb3e24449f0c9ebc5cdafab64b88996.nii.gz/MD5E-s231622--3fb3e24449f0c9ebc5cdafab64b88996.nii.gz

MaxMun_a/sub-0051372/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

MaxMun_a/sub-0051372/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/MF/fp/MD5E-s258429--618701f7d3237813886d9bd00905ce9d.nii.gz/MD5E-s258429--618701f7d3237813886d9bd00905ce9d.nii.gz

MaxMun_a/sub-0051372/mri/Tian_Subcortex_S2_7T_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

MaxMun_a/sub-0051372/mri/Tian_Subcortex_S2_7T_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pj/Wz/MD5E-s21989--2be1187602c2879cfd2f51ddb6bec865.nii.gz/MD5E-s21989--2be1187602c2879cfd2f51ddb6bec865.nii.gz

MaxMun_a/sub-0051372/mri/aal3_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

MaxMun_a/sub-0051372/mri/aal3_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/zQ/06/MD5E-s175779--61ca3f946139959488c61a0abd064e30.nii.gz/MD5E-s175779--61ca3f946139959488c61a0abd064e30.nii.gz

MaxMun_a/sub-0051372/mri/anatomy3_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

MaxMun_a/sub-0051372/mri/anatomy3_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4z/f5/MD5E-s123808--8fd5cf4195d0ae4e7769f1a812363895.nii.gz/MD5E-s123808--8fd5cf4195d0ae4e7769f1a812363895.nii.gz

MaxMun_a/sub-0051372/mri/anon_misub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/FZ/Wm/MD5E-s4106363--e29437cb0cea50c8066a3916c4eb9087.nii.gz/MD5E-s4106363--e29437cb0cea50c8066a3916c4eb9087.nii.gz

MaxMun_a/sub-0051372/mri/anon_msub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/P9/78/MD5E-s8555558--8a0843dd7d1a6f742a2e624339a62ea9.nii.gz/MD5E-s8555558--8a0843dd7d1a6f742a2e624339a62ea9.nii.gz

MaxMun_a/sub-0051372/mri/cat_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/0M/mg/MD5E-s94096--4063ae1bb36c60675c025a4ec69c2938.nii.gz/MD5E-s94096--4063ae1bb36c60675c025a4ec69c2938.nii.gz

MaxMun_a/sub-0051372/mri/cobra_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

MaxMun_a/sub-0051372/mri/cobra_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9V/15/MD5E-s45578--a3b14d71f1f5a07291511f05de77ae5f.nii.gz/MD5E-s45578--a3b14d71f1f5a07291511f05de77ae5f.nii.gz

MaxMun_a/sub-0051372/mri/hammers_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

MaxMun_a/sub-0051372/mri/hammers_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/k0/45/MD5E-s137419--dbd522a04af6602146b8bfa691cc7b44.nii.gz/MD5E-s137419--dbd522a04af6602146b8bfa691cc7b44.nii.gz

MaxMun_a/sub-0051372/mri/ibsr_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

MaxMun_a/sub-0051372/mri/ibsr_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8p/w8/MD5E-s146476--1d586076ab044560e624f96e53c4dc65.nii.gz/MD5E-s146476--1d586076ab044560e624f96e53c4dc65.nii.gz

MaxMun_a/sub-0051372/mri/it_sub-0051372_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/kj/XM/MD5E-s283--8462431a1584e018c0029d3ca918a18a.mat/MD5E-s283--8462431a1584e018c0029d3ca918a18a.mat

MaxMun_a/sub-0051372/mri/it_sub-0051372_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/18/Wm/MD5E-s283--c97a27de2988cbf33912e6c1c15dfb31.mat/MD5E-s283--c97a27de2988cbf33912e6c1c15dfb31.mat

MaxMun_a/sub-0051372/mri/iy_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/3f/1F/MD5E-s41990178--23b220cb11044038e1f56a1b654449bf.nii.gz/MD5E-s41990178--23b220cb11044038e1f56a1b654449bf.nii.gz

MaxMun_a/sub-0051372/mri/julichbrain_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

MaxMun_a/sub-0051372/mri/julichbrain_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/gm/Pj/MD5E-s184416--fc75b0f0051f33eb15768615a9ef995e.nii.gz/MD5E-s184416--fc75b0f0051f33eb15768615a9ef995e.nii.gz

MaxMun_a/sub-0051372/mri/lpba40_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

MaxMun_a/sub-0051372/mri/lpba40_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1j/9J/MD5E-s135628--9903db985c9ba2a6f709d57f8aa32298.nii.gz/MD5E-s135628--9903db985c9ba2a6f709d57f8aa32298.nii.gz

MaxMun_a/sub-0051372/mri/m0wp1sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/16/Jp/MD5E-s2585168--058ecacc59a48ee59a5e5e11d4215210.nii.gz/MD5E-s2585168--058ecacc59a48ee59a5e5e11d4215210.nii.gz

MaxMun_a/sub-0051372/mri/m0wp2sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Fv/3G/MD5E-s2290820--e4fdded8b462663720f5c16b3c34fe7d.nii.gz/MD5E-s2290820--e4fdded8b462663720f5c16b3c34fe7d.nii.gz

MaxMun_a/sub-0051372/mri/m0wp3sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9v/XW/MD5E-s2463849--924464868d1f7720ae53a62b3a959163.nii.gz/MD5E-s2463849--924464868d1f7720ae53a62b3a959163.nii.gz

MaxMun_a/sub-0051372/mri/mori_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

MaxMun_a/sub-0051372/mri/mori_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/X8/gg/MD5E-s161465--b9fb3cdd7d5a1a4faf791f763f994171.nii.gz/MD5E-s161465--b9fb3cdd7d5a1a4faf791f763f994171.nii.gz

MaxMun_a/sub-0051372/mri/mwp1sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/V8/zZ/MD5E-s2591613--0b35f1b5d5b0d3bd3fd270546d3ba0cf.nii.gz/MD5E-s2591613--0b35f1b5d5b0d3bd3fd270546d3ba0cf.nii.gz

MaxMun_a/sub-0051372/mri/mwp2sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/WV/XG/MD5E-s2291765--d18810d00c02fa972616967583dd1313.nii.gz/MD5E-s2291765--d18810d00c02fa972616967583dd1313.nii.gz

MaxMun_a/sub-0051372/mri/mwp3sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/JM/mq/MD5E-s2460501--9e6695c7d8af9c4aa7ecf1d6eab61633.nii.gz/MD5E-s2460501--9e6695c7d8af9c4aa7ecf1d6eab61633.nii.gz

MaxMun_a/sub-0051372/mri/neuromorphometrics_sub-0051372_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/w9/vx/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv/MD5E-s6638--e2cdef92ec4761f71c0546923418c27b.csv

MaxMun_a/sub-0051372/mri/neuromorphometrics_sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051372/mri/p0sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051372/mri/p1sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051372/mri/p2sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051372/mri/p3sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051372/mri/rp1sub-0051372_T1w_affine.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051372/mri/rp2sub-0051372_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/mq/1J/MD5E-s298292--5ee7b3fa96f1b93fe1b082150d1fdb03.nii.gz/MD5E-s298292--5ee7b3fa96f1b93fe1b082150d1fdb03.nii.gz

MaxMun_a/sub-0051372/mri/rp3sub-0051372_T1w_affine.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051372/mri/t_sub-0051372_T1w_affine_reorient.mat

@@ -0,0 +1 @@
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MaxMun_a/sub-0051372/mri/t_sub-0051372_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
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MaxMun_a/sub-0051372/mri/thalamus_sub-0051372_T1w.csv

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MaxMun_a/sub-0051372/mri/thalamus_sub-0051372_T1w.nii.gz

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MaxMun_a/sub-0051372/mri/wj_sub-0051372_T1w.nii.gz

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MaxMun_a/sub-0051372/mri/wmisub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051372/mri/wmsub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051372/mri/wp0sub-0051372_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_a/sub-0051372/mri/wp1sub-0051372_T1w.nii.gz

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MaxMun_a/sub-0051372/report/catlog_sub-0051372_T1w.nii.txt

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MaxMun_a/sub-0051372/report/catreportj_sub-0051372_T1w.jpg

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MaxMun_a/sub-0051372/surf/s22.mesh.fractaldimension.resampled_32k.sub-0051372_T1w.dat

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