[DATALAD RUNCMD] Compute MaxMun_b/sub-0051324

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "496fecdf-43d2-4679-8947-92d2ed4abdeb",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/ABIDE/MaxMun_b/sub-0051324/anat/sub-0051324_T1w.nii.gz"
 ],
 "outputs": [
  "MaxMun_b/sub-0051324"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

MaxMun_b/sub-0051324/label/catROI_sub-0051324_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/60/Fw/MD5E-s57964--db4e45cb0aaf5c94d6e0b96e20f4d6ad.mat/MD5E-s57964--db4e45cb0aaf5c94d6e0b96e20f4d6ad.mat

MaxMun_b/sub-0051324/label/catROI_sub-0051324_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/Pm/z3/MD5E-s188858--f1190531f95b537e33e2e977cf5738e0.xml/MD5E-s188858--f1190531f95b537e33e2e977cf5738e0.xml

MaxMun_b/sub-0051324/label/catROIs_sub-0051324_T1w.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/1q/ZK/MD5E-s120112--7bd9da036324835b25b4767237c02c13.mat/MD5E-s120112--7bd9da036324835b25b4767237c02c13.mat

MaxMun_b/sub-0051324/label/catROIs_sub-0051324_T1w.xml

@@ -0,0 +1 @@
+../../../.git/annex/objects/q3/7P/MD5E-s332098--5a555047c2797427b58312ce50b1c099.xml/MD5E-s332098--5a555047c2797427b58312ce50b1c099.xml

MaxMun_b/sub-0051324/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

MaxMun_b/sub-0051324/mri/Schaefer2018_100Parcels_17Networks_order_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vw/Wf/MD5E-s167337--d0384fbae6e40205e8b43089ee8f7a1e.nii.gz/MD5E-s167337--d0384fbae6e40205e8b43089ee8f7a1e.nii.gz

MaxMun_b/sub-0051324/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

MaxMun_b/sub-0051324/mri/Schaefer2018_200Parcels_17Networks_order_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/J0/F1/MD5E-s189614--557dce89ae7a6c558784e7f69660d5bb.nii.gz/MD5E-s189614--557dce89ae7a6c558784e7f69660d5bb.nii.gz

MaxMun_b/sub-0051324/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

MaxMun_b/sub-0051324/mri/Schaefer2018_400Parcels_17Networks_order_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jz/Wm/MD5E-s255305--8adfdd2d53334053793fff7aa0c87998.nii.gz/MD5E-s255305--8adfdd2d53334053793fff7aa0c87998.nii.gz

MaxMun_b/sub-0051324/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

MaxMun_b/sub-0051324/mri/Schaefer2018_600Parcels_17Networks_order_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/jJ/Kz/MD5E-s284583--282c21b81f481b2dcba9db3a07aa2828.nii.gz/MD5E-s284583--282c21b81f481b2dcba9db3a07aa2828.nii.gz

MaxMun_b/sub-0051324/mri/Tian_Subcortex_S2_7T_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

MaxMun_b/sub-0051324/mri/Tian_Subcortex_S2_7T_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/f6/jQ/MD5E-s19395--b2f3916d05ca32e1e6c71da2936ffad6.nii.gz/MD5E-s19395--b2f3916d05ca32e1e6c71da2936ffad6.nii.gz

MaxMun_b/sub-0051324/mri/aal3_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/PW/Wq/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv/MD5E-s8539--0893049ededf3cc4f5e96b41b8938dc0.csv

MaxMun_b/sub-0051324/mri/aal3_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/8m/F3/MD5E-s184116--b4c18cb266a409cf97044d9c7cbbda51.nii.gz/MD5E-s184116--b4c18cb266a409cf97044d9c7cbbda51.nii.gz

MaxMun_b/sub-0051324/mri/anatomy3_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/13/J2/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv/MD5E-s8828--e4f7360ef28ecf9e0a773b8590a94261.csv

MaxMun_b/sub-0051324/mri/anatomy3_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/2p/Q9/MD5E-s135847--e7c0490f01a0fd5e3677129408f551a0.nii.gz/MD5E-s135847--e7c0490f01a0fd5e3677129408f551a0.nii.gz

MaxMun_b/sub-0051324/mri/anon_misub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/1f/8V/MD5E-s4538135--9f760d9c4af2abf27030a1e6afa3bcf2.nii.gz/MD5E-s4538135--9f760d9c4af2abf27030a1e6afa3bcf2.nii.gz

MaxMun_b/sub-0051324/mri/anon_msub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/6q/WQ/MD5E-s7383031--ab42625617fc3aa1d481542f7931fa33.nii.gz/MD5E-s7383031--ab42625617fc3aa1d481542f7931fa33.nii.gz

MaxMun_b/sub-0051324/mri/cat_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/j9/p6/MD5E-s94266--cf9c9bfa82a5dd81cb80808e6f83e5e0.nii.gz/MD5E-s94266--cf9c9bfa82a5dd81cb80808e6f83e5e0.nii.gz

MaxMun_b/sub-0051324/mri/cobra_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

MaxMun_b/sub-0051324/mri/cobra_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/f3/xK/MD5E-s33699--0c0fe0031b70bccbe40532055c17ae73.nii.gz/MD5E-s33699--0c0fe0031b70bccbe40532055c17ae73.nii.gz

MaxMun_b/sub-0051324/mri/hammers_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

MaxMun_b/sub-0051324/mri/hammers_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/g8/70/MD5E-s144026--ae9d4574981b824b41af7dbe5915ad32.nii.gz/MD5E-s144026--ae9d4574981b824b41af7dbe5915ad32.nii.gz

MaxMun_b/sub-0051324/mri/ibsr_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

MaxMun_b/sub-0051324/mri/ibsr_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/m1/G0/MD5E-s149559--de1170715fa65dfa2de9901f39a0d02d.nii.gz/MD5E-s149559--de1170715fa65dfa2de9901f39a0d02d.nii.gz

MaxMun_b/sub-0051324/mri/it_sub-0051324_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/GQ/M6/MD5E-s283--b26bc412c1bc92e47c55610509eae032.mat/MD5E-s283--b26bc412c1bc92e47c55610509eae032.mat

MaxMun_b/sub-0051324/mri/it_sub-0051324_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../.git/annex/objects/vm/4Z/MD5E-s284--a4225621c9f8b5a71a2b37af422b9abc.mat/MD5E-s284--a4225621c9f8b5a71a2b37af422b9abc.mat

MaxMun_b/sub-0051324/mri/iy_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/GV/xm/MD5E-s41599203--943fcb2b58c5049c8fc129a2bd83b631.nii.gz/MD5E-s41599203--943fcb2b58c5049c8fc129a2bd83b631.nii.gz

MaxMun_b/sub-0051324/mri/julichbrain_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/pG/GJ/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv/MD5E-s8614--f221d431f4917cb1e67edccb24803500.csv

MaxMun_b/sub-0051324/mri/julichbrain_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/90/3f/MD5E-s202276--3fa79e0d508bd32112434b731d8d8e12.nii.gz/MD5E-s202276--3fa79e0d508bd32112434b731d8d8e12.nii.gz

MaxMun_b/sub-0051324/mri/lpba40_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Jq/ff/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv/MD5E-s2398--3d690ee350e89df3b18143a8f653fff9.csv

MaxMun_b/sub-0051324/mri/lpba40_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/7z/7q/MD5E-s141241--a6eaab3dd77e696ebaf2727977f025b5.nii.gz/MD5E-s141241--a6eaab3dd77e696ebaf2727977f025b5.nii.gz

MaxMun_b/sub-0051324/mri/m0wp1sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Q6/Wv/MD5E-s2561303--d3f3a040ab5a2900f98fbded23f5f025.nii.gz/MD5E-s2561303--d3f3a040ab5a2900f98fbded23f5f025.nii.gz

MaxMun_b/sub-0051324/mri/m0wp2sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/9X/x7/MD5E-s2298482--3f14d6a03137f4c68e3d23554cc06d0e.nii.gz/MD5E-s2298482--3f14d6a03137f4c68e3d23554cc06d0e.nii.gz

MaxMun_b/sub-0051324/mri/m0wp3sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/JQ/0q/MD5E-s2605360--89cc3eb12f217bae254783a95f9771e1.nii.gz/MD5E-s2605360--89cc3eb12f217bae254783a95f9771e1.nii.gz

MaxMun_b/sub-0051324/mri/mori_sub-0051324_T1w.csv

@@ -0,0 +1 @@
+../../../.git/annex/objects/Xv/zk/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv/MD5E-s5456--9f4808b9e7bd4b0eac1143e97b261e05.csv

MaxMun_b/sub-0051324/mri/mori_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/mwp1sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/4g/GM/MD5E-s2562115--9098a2f94c00276f095aed69d2164cb2.nii.gz/MD5E-s2562115--9098a2f94c00276f095aed69d2164cb2.nii.gz

MaxMun_b/sub-0051324/mri/mwp2sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/pX/x1/MD5E-s2294071--1c67f697807fb9176c98522dde2da7f9.nii.gz/MD5E-s2294071--1c67f697807fb9176c98522dde2da7f9.nii.gz

MaxMun_b/sub-0051324/mri/mwp3sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/zM/Xz/MD5E-s2601914--fdcb0f05531e682469d714c61d4687f4.nii.gz/MD5E-s2601914--fdcb0f05531e682469d714c61d4687f4.nii.gz

MaxMun_b/sub-0051324/mri/neuromorphometrics_sub-0051324_T1w.csv

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/neuromorphometrics_sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/p0sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/p1sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/p2sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/p3sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/fJ/PQ/MD5E-s433917--153a9aa307cc8e8570b02325076e03b3.nii.gz/MD5E-s433917--153a9aa307cc8e8570b02325076e03b3.nii.gz

MaxMun_b/sub-0051324/mri/rp1sub-0051324_T1w_affine.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/rp2sub-0051324_T1w_affine.nii.gz

@@ -0,0 +1 @@
+../../../.git/annex/objects/Zk/mg/MD5E-s280581--c3ca832fa9f3f803eeca0fc2e95f069d.nii.gz/MD5E-s280581--c3ca832fa9f3f803eeca0fc2e95f069d.nii.gz

MaxMun_b/sub-0051324/mri/rp3sub-0051324_T1w_affine.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/t_sub-0051324_T1w_affine_reorient.mat

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/t_sub-0051324_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/thalamus_sub-0051324_T1w.csv

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/thalamus_sub-0051324_T1w.nii.gz

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MaxMun_b/sub-0051324/mri/wj_sub-0051324_T1w.nii.gz

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MaxMun_b/sub-0051324/mri/wmisub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/wmsub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/wp0sub-0051324_T1w.nii.gz

@@ -0,0 +1 @@
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MaxMun_b/sub-0051324/mri/wp1sub-0051324_T1w.nii.gz

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