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-# 2023_Kalantari_AIDAqc
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+# Collection of Resources for AIDAqc Pipeline
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+This repository contains various resources related to the [AIDAqc pipeline](git@github.com:Aswendt-Lab/AIDAqc.git) used in the following Publication: ***Automated quality control of small animal MR neuroimaging data***, DOI: tbd
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+## Repository Structure:
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+
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+- The code for the AIDAqc pipeline can be found in the `code/` directory. This code is also linked to GitHub for further reference.
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+- The final results generated by the [AIDAqc](https://github.com/Aswendt-Lab/AIDAqc) pipeline for each dataset can be located in the respective dataset's `output/` folder.
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+- The `input/` folder contains all the datasets and other necessary data.
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+- Additional documentation related to this project can be accessed via this [link](https://github.com/Aswendt-Lab/MRI_Standardization_AIDAqc) and also via the README file in the doc folder.
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+
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+## Additional Information:
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+This structured dataset was created with reference to the following publication:
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+[DOI:10.1038/s41597-023-02242-8](https://www.nature.com/articles/s41597-023-02242-8)
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+If you have any questions or need further assistance, please feel free to contact us. # 2023_Kalantari_AIDAqc
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+Additional information regarding each folder and files in the input code and output folders are provided in their corresponding README file.
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arefks