Dateien hochladen nach 'Diurnalmodulation'

Diurnalmodulation/dataset_description.json

@@ -0,0 +1,12 @@
+{
+"Name": "Diurnal modulation of BOLD dynamics",
+    "BIDSVersion":  "1.0.2",
+    "Authors": ["Lorenzo Cordani",
+                "Enzo Tagliazucchi", 
+                "Céline Vetter", 
+                "Christian Hassemer",
+                "Till Roenneberg", 
+                "Jörg H. Stehle", 
+                "Christian A. Kell"]
+
+}

Diurnalmodulation/participants.json

@@ -0,0 +1,219 @@
+{
+
+"DiurnalModulationBoldDynamicsMetadata":
+{
+"Description": "Extracted BOLD values, behavioral data, and between- and within-subject variables"},
+
+
+"participant_id":{
+"Description": "Scanned Participants"},
+
+
+"ToD":{
+"Description": "Time of day: 08:00 h, 11:00 h, 14:00 h, 17:00 h, 20:00 h ,23:00"},
+
+"Day":{
+"Description": "Scanning day: D1, D2"},
+
+
+"VIS":
+{
+
+"Description": "Restings-state BOLD SD, extracted from visual cortex cluster"
+},
+
+
+"SS":
+{
+
+"Description": "Restings-state BOLD SD, extracted from all 3 somatosensory cortex clusters"
+},
+
+
+"AUD":
+{
+
+"Description": "Restings-state BOLD SD, extracted from auditory cortex cluster"
+},
+
+
+"EoO":
+{
+
+"Description": "Errors of omission during the visual detection task"
+},
+
+
+"MSFsc":
+{
+
+"Description": "Chronotype"
+},
+
+
+"SO":
+{
+
+"Description": "Sleep offset on scanning days"
+},
+
+
+"ASD":
+{
+
+"Description": "Sleep debt on scanning days"
+},
+
+
+"HR":
+{
+
+"Description": "Mean heart rate during resting-state scanning"
+},
+
+"RespR":
+{
+
+"Description": "Mean respiratory rate during resting-state scanning"
+},
+
+
+"Temp":
+{
+
+"Description": "Temperature at each resting-state scanning session"
+},
+
+
+"ESS":
+{
+
+"Description": "Subjective Sleepiness (modified Epworth Sleepiness Scale) at each resting-state scanning session"
+
+},
+
+
+"RP1_A":
+{
+
+"Description": "Amplitude in head translation in the X-axis during resting-state scanning"
+},
+
+
+"RP1_V":
+{
+
+"Description": "Variance in head translation in the X-axis during resting-state scanning"
+},
+
+
+"RP1_Out":
+{
+
+"Description": "Amount of outliers in head translation in the X-axis during resting-state scanning"
+},
+
+
+"RP2_A":
+{
+
+"Description": "Amplitude in head translation in the Y-axis during resting-state scanning"
+},
+
+
+"RP2_V":
+{
+"Description": "Variance in head translation in the Y-axis during resting-state scanning"
+},
+
+
+"RP2_Out":
+{
+
+"Description": "Amount of outliers in head translation in the Y-axis during resting-state scanning"
+},
+
+
+"RP3_A":
+{
+
+"Description": "Amplitude in head translation in the z-axis during resting-state scanning"
+},
+
+
+"RP3_V":
+{
+
+"Description": "Variance in head translation in the z-axis during resting-state scanning"
+},
+
+
+"RP3_Out":
+{
+
+"Description": "Amount of outliers in head translation in the z-axis during resting-state scanning"
+},
+
+
+"RP4_A":
+{
+
+"Description": "Amplitude in head rotation around the X-axis during resting-state scanning"
+},
+
+
+"RP4_V":
+{
+
+"Description": "Variance in head rotation around the X-axis during resting-state scanning"
+},
+
+
+"RP4_Out":
+{
+
+"Description": "Amount of outliers in head rotation around the X-axis during resting-state scanning"
+},
+
+
+"RP5_A":
+{
+
+"Description": "Amplitude in head rotation around the y-axis during resting-state scanning"
+},
+
+
+"RP5_V":
+{
+
+"Description": "Variance in head rotation around the y-axis during resting-state scanning"
+},
+
+
+"RP5_Out":
+{
+
+"Description": "Amount of outliers in head rotation around the y-axis during resting-state scanning"
+},
+
+
+"RP6_A":
+{
+
+"Description": "Amplitude in head rotation around the z-axis during resting-state scanning"
+},
+
+
+"RP6_V":
+{
+
+"Description": "Variance in head rotation around the z-axis during resting-state scanning"
+},
+
+
+"RP6_Out":
+{
+
+"Description": "Amount of outliers in head rotation around the z-axis during resting-state scanning"
+}
+}

Diurnalmodulation/participants.tsv

@@ -0,0 +1,169 @@
+participant_id	ToD	Day	VIS	SS	AUD	EoO	MSFsc	SO	ASD	HR	RespR	Temp	ESS	RP1_A	RP1_V	RP1_Out	RP2_A	RP2_V	RP2_Out	RP3_A	RP3_V	RP3_Out	RP4_A	RP4_V	RP4_Out	RP5_A	RP5_V	RP5_Out	RP6_A	RP6_V	RP6_Out		
+sub-01	1	1	2.2697	2.2747	2.2079	9999	9999.00	6.00	9999.00	71	12	36.2	13	0.2073	0.0544	1	0.6423	0.1629	7	0.8488	0.1841	5	0.0068	0.001	15	0.0036	0.0007	13	0.0024	0.0005	2		
+sub-01	2	1	2.5959	3.3477	2.5371	9999	9999.00	6.00	9999.00	68	13	35.9	5	0.3306	0.0531	16	0.7779	0.1913	14	1.923	0.2847	17	0.0118	0.0019	14	0.0078	0.0014	7	0.0031	0.0004	13		
+sub-01	3	1	2.6568	3.244	2.5775	9999	9999.00	6.00	9999.00	62	14	35.8	10	3.7405	0.2926	6	1.4741	0.1945	4	2.2517	0.3262	6	0.0264	0.0023	5	0.0263	0.0028	6	0.0353	0.0032	5		
+sub-01	4	1	2.8365	3.5192	2.8296	9999	9999.00	6.00	9999.00	73	15	36.2	3	0.6679	0.1458	6	0.555	0.0937	12	3.4272	0.6339	23	0.0298	0.0071	9	0.0164	0.0038	6	0.0059	0.0011	5		
+sub-01	5	1	2.4013	2.5514	2.4754	9999	9999.00	6.00	9999.00	72	13	36.1	8	0.4122	0.0663	8	0.7773	0.1898	8	0.6806	0.1432	12	0.0098	0.0014	9	0.0067	0.0011	7	0.0048	0.0007	5		
+sub-01	6	1	4.469	4.239	3.2421	9999	9999.00	6.00	9999.00	65	17	35.7	13	0.938	0.1655	5	2.3702	0.5285	1	4.4422	0.6988	12	0.0658	0.0147	1	0.0271	0.0041	7	0.0149	0.0015	11		
+sub-02	1	1	2.6758	2.9234	2.235	9999	4.55	6.83	1.04	71	16	35.7	3	0.2236	0.0456	6	0.8832	0.2519	0	2.0731	0.4628	2	0.0168	0.0026	8	0.004	0.001	1	0.0031	0.0006	6		
+sub-02	2	1	3.818	4.3908	3.0378	9999	4.55	6.83	1.04	66	15	35.3	3	0.5534	0.09	11	0.9872	0.265	11	3.4711	0.9188	3	0.0215	0.0039	5	0.0087	0.0012	18	0.0074	0.0017	5		
+sub-02	3	1	3.127	3.1476	2.4562	9999	4.55	6.83	1.04	70	16	36	11	0.6969	0.2018	0	0.5952	0.1474	1	1.7599	0.4119	8	0.0116	0.0021	10	0.0061	0.0013	4	0.0096	0.0028	0		
+sub-02	4	1	2.228	2.435	1.9409	9999	4.55	6.83	1.04	70	18	36.8	4	0.3142	0.05	9	0.857	0.1928	8	2.2027	0.3582	10	0.0261	0.0037	9	0.0038	0.0007	3	0.0043	0.0007	10		
+sub-02	5	1	1.997	2.0472	1.7299	9999	4.55	6.83	1.04	81	17	36.7	3	0.7157	0.2161	0	0.6114	0.1672	3	1.1071	0.2793	11	0.011	0.0023	11	0.0045	0.001	3	0.0054	0.0015	0		
+sub-02	6	1	2.7812	2.7074	2.307	9999	4.55	6.83	1.04	74	17	35.9	11	0.2491	0.0556	10	0.6411	0.1744	4	1.7474	0.2445	4	0.0121	0.0018	12	0.006	0.0014	5	0.0045	0.001	6		
+sub-03	1	1	2.8531	3.4233	2.6106	9999	4.38	7.17	4.42	70	14	36	13	0.2723	0.0635	7	0.6789	0.1738	2	2.1228	0.6039	29	0.0134	0.0025	9	0.0066	0.0018	3	0.0033	0.0005	9		
+sub-03	2	1	2.9802	3.0524	2.7931	9999	4.38	7.17	4.42	79	16	36.3	8	0.1259	0.0273	11	0.5961	0.1583	2	0.3519	0.0777	6	0.0034	0.0006	10	0.0028	0.0008	0	0.0015	0.0003	14		
+sub-03	3	1	4.8127	4.7145	3.9023	9999	4.38	7.17	4.42	64	14	36.3	9	0.1973	0.0343	3	0.6987	0.1881	0	0.6465	0.0699	8	0.0069	0.0013	5	0.002	0.0005	16	0.0027	0.0005	13		
+sub-03	4	1	3.3593	3.4551	3.0245	9999	4.38	7.17	4.42	67	16	36.6	9	0.2006	0.0341	8	0.633	0.1755	0	0.3658	0.0541	10	0.0055	0.001	9	0.0047	0.0011	3	0.0026	0.0003	7		
+sub-03	5	1	2.8525	3.5326	2.7625	9999	4.38	7.17	4.42	72	15	36.6	6	0.3154	0.0822	6	0.5797	0.1362	8	1.1273	0.3184	15	0.0098	0.0019	12	0.0084	0.0017	1	0.004	0.001	18		
+sub-03	6	1	5.518	5.2049	4.3532	9999	4.38	7.17	4.42	64	15	36.3	4	0.6936	0.1156	10	0.9842	0.1818	8	3.8311	0.7914	7	0.0413	0.0063	8	0.0088	0.0014	11	0.0109	0.0019	10		
+sub-04	1	1	4.5843	3.5171	4.027	9999	6.08	6.67	9999.00	61	13	35.3	14	0.5886	0.0894	13	2.4226	0.628	1	3.7309	0.6448	7	0.0205	0.0038	4	0.0198	0.0054	1	0.012	0.0023	7		
+sub-04	2	1	3.9234	3.2966	3.5303	9999	6.08	6.67	9999.00	54	10	35.6	17	0.7926	0.2506	0	1.8427	0.5668	0	1.8973	0.4747	8	0.0188	0.003	12	0.0108	0.0023	9	0.0127	0.0046	0		
+sub-04	3	1	3.5725	3.009	3.0518	9999	6.08	6.67	9999.00	66	15	36.1	3	0.3195	0.082	12	1.3563	0.3715	0	0.718	0.1065	7	0.007	0.0019	0	0.0062	0.0012	6	0.0035	0.0008	14		
+sub-04	4	1	2.9867	2.6769	2.7219	9999	6.08	6.67	9999.00	59	15	36.1	16	0.2285	0.0329	10	1.3091	0.3478	0	0.5374	0.0631	6	0.0082	0.0009	8	0.004	0.0004	10	0.0043	0.0005	9		
+sub-04	5	1	2.7412	2.3154	2.5188	9999	6.08	6.67	9999.00	62	15	35.9	9	0.525	0.1587	0	1.4592	0.4013	1	0.6938	0.1713	3	0.0144	0.0022	8	0.0031	0.0009	0	0.0071	0.0024	0		
+sub-04	6	1	2.5687	2.0667	2.2948	9999	6.08	6.67	9999.00	57	15	35.5	17	0.1647	0.0465	0	1.2443	0.3434	0	0.3078	0.0675	11	0.0026	0.0006	9	0.0024	0.0007	0	0.0018	0.0005	3		
+sub-05	1	1	2.9364	2.6533	2.6878	9999	5.79	6.17	0.82	69	12	36.9	11	1.0049	0.2051	7	1.5457	0.4078	1	2.9888	0.7036	3	0.0167	0.0042	9	0.0063	0.0011	6	0.009	0.0021	14		
+sub-05	2	1	2.7255	2.1325	2.4487	9999	5.79	6.17	0.82	65	12	37	2	0.3427	0.074	5	0.6861	0.1493	4	1.4457	0.4397	0	0.0122	0.0035	2	0.0035	0.0012	0	0.0054	0.0011	5		
+sub-05	3	1	4.6626	3.4235	3.9955	9999	5.79	6.17	0.82	68	13	36.9	4	0.202	0.0383	10	0.6797	0.1553	4	0.7665	0.1188	6	0.0079	0.0019	6	0.004	0.001	4	0.0045	0.0009	13		
+sub-05	4	1	3.5778	3.0569	2.955	9999	5.79	6.17	0.82	62	12	37	8	1.9896	0.3084	9	0.3506	0.0748	9	1.6018	0.2703	9	0.0126	0.0023	13	0.018	0.0051	20	0.0066	0.0014	15		
+sub-05	5	1	3.1989	2.5689	2.9389	9999	5.79	6.17	0.82	59	10	37	4	0.2729	0.0685	2	0.7333	0.1694	4	0.6186	0.1643	3	0.0102	0.0028	1	0.0029	0.0006	18	0.0026	0.0004	17		
+sub-05	6	1	3.4138	2.7087	3.0215	9999	5.79	6.17	0.82	58	13	36.3	15	0.8143	0.2337	0	0.7388	0.1922	7	1.2518	0.3302	0	0.0136	0.0029	17	0.0031	0.0005	9	0.0124	0.0034	0		
+sub-06	1	1	2.8828	2.8176	2.2874	0	3.89	6.67	2.27	71	15	36.9	12	0.342	0.0771	15	0.5833	0.1111	10	1.4123	0.3834	6	0.0143	0.003	10	0.0066	0.0016	3	0.0067	0.0022	0		
+sub-06	2	1	2.9536	2.7635	2.2121	1	3.89	6.67	2.27	69	17	36.6	4	0.0851	0.0155	8	1.2027	0.3359	0	0.779	0.2328	0	0.0092	0.0023	3	0.002	0.0005	1	0.0024	0.0006	0		
+sub-06	3	1	3.8191	3.4259	2.6022	3	3.89	6.67	2.27	64	18	37.1	4	0.1227	0.03	4	1.5472	0.4283	0	2.5472	0.7593	0	0.0227	0.0065	2	0.0054	0.0015	19	0.0068	0.0019	9		
+sub-06	4	1	4.0096	3.4505	2.8955	0	3.89	6.67	2.27	66	18	36.8	0	0.1468	0.0351	4	1.4487	0.4263	0	2.9165	1.017	0	0.0335	0.0118	0	0.0046	0.0012	0	0.0067	0.0023	0		
+sub-06	5	1	2.2071	1.7096	1.6632	0	3.89	6.67	2.27	68	18	37	0	0.0577	0.0143	2	1.1546	0.3332	0	0.5109	0.1366	0	0.0069	0.0018	9	0.0059	0.0019	0	0.005	0.0016	0		
+sub-06	6	1	3.5301	3.0137	3.0171	3	3.89	6.67	2.27	58	18	36.7	9	0.1408	0.0348	2	1.2019	0.3402	0	1.8509	0.5107	3	0.0255	0.0071	0	0.0061	0.0016	3	0.0038	0.0009	1		
+sub-07	1	1	1.9575	2.202	1.8282	0	3.97	5.67	1.44	63	16	36.3	0	0.2744	0.0609	6	1.0888	0.295	1	0.3983	0.0826	6	0.0025	0.0005	14	0.0045	0.0008	9	0.0035	0.0007	11		
+sub-07	2	1	3.2729	3.1451	2.41	0	3.97	5.67	1.44	56	17	36.2	1	0.3458	0.0731	10	1.2468	0.3622	1	1.4693	0.1305	3	0.016	0.002	3	0.0048	0.0009	12	0.0046	0.0009	10		
+sub-07	3	1	3.6487	3.1099	2.6221	1	3.97	5.67	1.44	55	18	36.7	1	0.6291	0.0924	5	1.1046	0.2928	0	0.3195	0.0715	8	0.0034	0.0007	6	0.0066	0.0009	6	0.006	0.0012	16		
+sub-07	4	1	4.8919	4.2978	2.7057	0	3.97	5.67	1.44	47	17	36.6	5	0.3479	0.0737	1	1.0592	0.2846	3	0.7756	0.0889	5	0.015	0.0013	1	0.004	0.0011	0	0.0043	0.0011	2		
+sub-07	5	1	2.8182	2.695	2.1901	0	3.97	5.67	1.44	49	17	36.6	5	0.2267	0.0378	10	1.0526	0.294	3	0.2989	0.0692	3	0.0045	0.001	8	0.003	0.0006	9	0.0028	0.0005	11		
+sub-07	6	1	4.1959	3.9384	2.5749	3	3.97	5.67	1.44	45	15	36.2	8	0.3858	0.0911	5	1.2099	0.321	2	0.9442	0.1125	9	0.0203	0.0022	6	0.0067	0.0011	8	0.0047	0.0011	2		
+sub-08	1	1	3.9089	3.149	4.1752	0	4.50	4.67	1.33	63	8	36.3	11	1.0218	0.2415	15	2.515	0.6408	2	3.9114	1.0388	4	0.0149	0.0039	4	0.0181	0.0052	2	0.0118	0.0028	10		
+sub-08	2	1	4.3684	3.6964	4.3205	1	4.50	4.67	1.33	52	7	36.6	7	0.4924	0.1134	11	2.2574	0.5256	1	3.6826	0.7745	8	0.0339	0.0045	12	0.0134	0.003	18	0.0054	0.0012	5		
+sub-08	3	1	4.2647	3.8568	4.2978	0	4.50	4.67	1.33	64	10	36.5	4	0.5022	0.0822	11	1.9191	0.5462	11	3.4834	1.0021	7	0.0313	0.0084	5	0.0073	0.0014	8	0.009	0.0013	13		
+sub-08	4	1	4.5942	4.0348	4.7327	2	4.50	4.67	1.33	62	11	36.6	9	0.6694	0.0985	8	2.3847	0.6468	0	4.4919	1.1636	10	0.0154	0.0032	5	0.018	0.0052	0	0.0077	0.0014	13		
+sub-08	5	1	3.535	2.9172	3.4966	0	4.50	4.67	1.33	59	14	37	12	0.5943	0.1364	9	2.3227	0.649	0	3.5484	1.0932	0	0.0087	0.0014	9	0.0127	0.0043	0	0.0137	0.0039	9		
+sub-08	6	1	3.4457	2.9211	3.6331	0	4.50	4.67	1.33	65	15	36.5	9	0.3292	0.0658	9	2.0954	0.5701	0	4.1145	1.0043	4	0.0304	0.0073	14	0.0088	0.0022	6	0.009	0.0018	15		
+sub-09	1	1	2.147	2.1949	1.9246	4	6.71	5.83	0.42	73	23	36.2	10	1.2263	0.3148	10	1.0064	0.2223	10	3.687	0.8345	10	0.0324	0.0075	15	0.0038	0.0007	12	0.0086	0.0025	0		
+sub-09	2	1	2.7879	3.5301	2.2479	3	6.71	5.83	0.42	62	20	36.1	9	0.426	0.1048	18	0.6457	0.2005	0	3.4745	0.9353	1	0.0212	0.0043	12	0.0064	0.0013	10	0.0097	0.0025	11		
+sub-09	3	1	2.5628	2.8708	2.4547	5	6.71	5.83	0.42	70	21	36.2	14	0.6048	0.1483	10	0.7071	0.173	9	4.4704	1.0996	13	0.0383	0.0103	16	0.0101	0.0014	9	0.0103	0.0019	5		
+sub-09	4	1	2.1067	2.4572	2.1927	1	6.71	5.83	0.42	72	22	36.1	15	0.7089	0.1779	4	0.834	0.2158	11	3.5363	0.9561	6	0.0338	0.0099	15	0.0055	0.001	12	0.0076	0.0021	0		
+sub-09	5	1	2.2901	2.5658	2.1555	0	6.71	5.83	0.42	68	22	36.3	7	1.7646	0.5809	0	1.7035	0.4967	10	5.296	1.4997	10	0.0545	0.0161	8	0.0055	0.001	8	0.0157	0.0044	1		
+sub-09	6	1	2.3495	2.4002	2.3638	0	6.71	5.83	0.42	69	22	36.2	9	0.5344	0.128	3	0.8542	0.2183	1	3.5058	0.9049	8	0.0174	0.0035	14	0.0082	0.0023	0	0.0128	0.0034	4		
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+sub-13	6	2	2.9616	2.4138	2.0964	2	5.00	5.33	1.50	53	15	35.9	16	1.2226	0.3252	1	1.9101	0.5339	0	2.7326	0.6915	3	0.0093	0.002	13	0.0074	0.0018	8	0.009	0.0024	0		
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+sub-14	2	2	3.192	2.2519	2.0093	2	3.98	9999.00	9999.00	64	18	36.5	9	0.9914	0.2939	0	1.9322	0.5409	0	1.2101	0.2052	3	0.0477	0.012	1	0.0163	0.0048	3	0.0114	0.0035	0		
+sub-14	3	2	3.6864	2.6166	2.7623	2	3.98	9999.00	9999.00	63	15	36.8	3	0.4235	0.0862	6	1.7255	0.4439	1	1.8294	0.431	7	0.0298	0.0073	8	0.0118	0.0033	1	0.0057	0.0012	9		
+sub-14	4	2	3.8178	2.4005	2.3038	0	3.98	9999.00	9999.00	72	19	36.8	2	0.8325	0.2272	0	2.3169	0.6756	0	1.4675	0.2302	7	0.0344	0.0076	4	0.0103	0.0025	11	0.0102	0.0031	0		
+sub-14	5	2	3.5377	2.3666	2.2723	1	3.98	9999.00	9999.00	65	20	36.9	7	0.5059	0.0876	9	2.0509	0.5992	0	0.8916	0.1558	5	0.0228	0.0061	1	0.0061	0.0018	0	0.0051	0.0008	17		
+sub-14	6	2	3.0598	2.2689	2.1721	0	3.98	9999.00	9999.00	70	20	36.6	7	0.5162	0.1437	1	1.8662	0.5235	0	0.8439	0.1957	3	0.0127	0.0035	4	0.0066	0.002	0	0.0058	0.0015	1		

Diurnalmodulation/task-VisDetectionBoldSD_bold.json

@@ -0,0 +1,9 @@
+{    
+
+"TaskName" : "task-VisDetectionBoldSD",
+"RepetitionTime": 2.0,
+
+"EchoTime": 0.03,
+
+"FlipAngle": 90
+}

Diurnalmodulation/task-restBoldALFF_bold.json

@@ -0,0 +1,9 @@
+{    
+
+"TaskName" : "task-restBoldALFF",
+"RepetitionTime": 2.0,
+
+"EchoTime": 0.03,
+
+"FlipAngle": 90
+}

Diurnalmodulation/task-restBoldSD_bold.json

@@ -0,0 +1,9 @@
+{    
+
+"TaskName" : "task-restBoldSD",
+"RepetitionTime": 2.0,
+
+"EchoTime": 0.03,
+
+"FlipAngle": 90
+}

Diurnalmodulation/task-restBoldThalamicConn_bold.json

@@ -0,0 +1,9 @@
+{    
+
+"TaskName" : "task-restBoldThalamicConn",
+"RepetitionTime": 2.0,
+
+"EchoTime": 0.03,
+
+"FlipAngle": 90
+}