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@@ -6,6 +6,11 @@ import json
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import re
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import pynwb
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import datetime
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+import os
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+
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+abspath = os.path.abspath(__file__)
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+dname = os.path.dirname(abspath)
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+os.chdir(dname)
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dir_path = "../../sourcedata/sub-M388/M388-2023-11-20_2_g0"
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#dir_path = "/mnt/DATA/data/studies/manish/mvmnda/sourcedata/sub-pixelfiber/M387-2023-10-20_g0"
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@@ -24,7 +29,7 @@ session_start_time = metadata["NWBFile"]["session_start_time"].replace(tzinfo=tz
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metadata["NWBFile"].update(session_start_time=session_start_time)
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session = (metadata["NWBFile"]["session_start_time"]).strftime("%Y%m%d%H%M%S")
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-print(session)
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+#print(session)
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# Maybe do data of birth rather than age
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metadata["Subject"] = dict(
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@@ -35,11 +40,11 @@ metadata["Subject"] = dict(
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#date_of_birth=session_start_time-age_delta,
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)
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# No idea why this needs to be done via `.update()`
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-#metadata["NWBFile"].update(session_id=session)
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+metadata["NWBFile"].update(session_id=session)
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#metadata["session_id"] = session
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-metadata["NWBFile"] = dict(session_id=session)
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+#metadata["NWBFile"] = dict(session_id=session)
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-print(metadata)
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+#print(metadata)
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#print(metadata)
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#print(metadata["NWBFile"])
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@@ -50,5 +55,5 @@ print(metadata)
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-nwbfile_path = "../_examplefile.nwb"
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+nwbfile_path = "../nwbdata/outfile.nwb"
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converter.run_conversion(nwbfile_path=nwbfile_path, metadata=metadata)
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