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Merge branch 'add_cell_explorer' of NeuralEnsemble/ephy_testing_data into master

sprenger 9 months ago
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cellexplorer/README.md

@@ -6,8 +6,10 @@ Original sources:
 - `dataset_1`: https://buzsakilab.nyumc.org/datasets/TingleyD/DT8/20170311_684um_2088um_170311_134350/
 - `dataset_2`: https://buzsakilab.nyumc.org/datasets/TingleyD/DT9/20170504_396um_0um_merge/
 - `dataset_3`: https://buzsakilab.nyumc.org/datasets/TingleyD/DT9/20170519_864um_900um_merge/
+- `dataset4` : https://buzsakilab.nyumc.org/datasets/PetersenP/CellExplorerExampleData/MS22/Peter_MS22_180629_110319_concat/
 
 Note:
-`dataset_2` and `dataset_3` contain mat files with version different from mat version 5.
+- `dataset_2` and `dataset_3` contain mat files with version different from mat version 5.
 - `dataset_2`: `sessionInfo` is saved as mat version 7.3.
 - `dataset_3`: `spikes.cellinfo` is saved as mat version 7.3
+- `dataset_4`: is a stubbed version of the original dataset (see above). There are two folders inside, one saved in the old matlab format and other in the new one (hdf5). They were stubbed with the following [program](https://gist.github.com/h-mayorquin/576e54fae7ff2cf0d1255f15fe80a20c). The binary files were stubbed to the first 1000 frames by using a `SlicingRecorder` in [SpikeInterface](https://spikeinterface.readthedocs.io/en/latest/).

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cellexplorer/dataset_4/Peter_MS22_180629_110319_concat_stubbed/Peter_MS22_180629_110319_concat_stubbed.ccf.channelInfo.mat

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cellexplorer/dataset_4/Peter_MS22_180629_110319_concat_stubbed/Peter_MS22_180629_110319_concat_stubbed.channelInfo.mat

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cellexplorer/dataset_4/Peter_MS22_180629_110319_concat_stubbed/Peter_MS22_180629_110319_concat_stubbed.dat

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cellexplorer/dataset_4/Peter_MS22_180629_110319_concat_stubbed/Peter_MS22_180629_110319_concat_stubbed.session.mat

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cellexplorer/dataset_4/Peter_MS22_180629_110319_concat_stubbed/Peter_MS22_180629_110319_concat_stubbed.spikes.cellinfo.mat

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cellexplorer/dataset_4/Peter_MS22_180629_110319_concat_stubbed_hdf5/Peter_MS22_180629_110319_concat_stubbed_hdf5.dat

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cellexplorer/dataset_4/Peter_MS22_180629_110319_concat_stubbed_hdf5/Peter_MS22_180629_110319_concat_stubbed_hdf5.lfp

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cellexplorer/dataset_4/Peter_MS22_180629_110319_concat_stubbed_hdf5/Peter_MS22_180629_110319_concat_stubbed_hdf5.session.mat

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cellexplorer/dataset_4/Peter_MS22_180629_110319_concat_stubbed_hdf5/Peter_MS22_180629_110319_concat_stubbed_hdf5.spikes.cellinfo.mat

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+/annex/objects/MD5E-s110242--ec4fd2d6684811970196a643b364cc98.mat