gin commit from nit-ope-de04

Modified files: 2

nix/README.md

@@ -1,6 +1,6 @@
 # Test files for the [Neuroscience Information eXchange (NIX)](https://github.com/G-Node/nix) format
 
-The `generated_testfile_neo_*.nix`files were automatically generated using `generated_nix_testfiles.sh` and `generate_nix_testfiles.py`. To regenerate these you need to have conda installed and run
+The `generated_testfile_neo_*.nix`files were automatically generated using `generated_nix_testfiles.sh` and `generate_nix_testfiles.py`. To regenerate these you need to have conda installed and run. Data are generated randomly using a fixed seed and should be identical across all files.
 
 ```
 . .generate_nix_testfiles.sh

nix/generate_nix_testfiles.py

@@ -13,6 +13,7 @@ n_epochs = 3
 
 random_generator = np.random.default_rng(seed=42)
 
+
 def get_rand(shape=None, min=0, max=1, sorted=False):
     data = random_generator.random(shape)
 
@@ -37,7 +38,7 @@ def generate_basic_block():
             seg.spiketrains.append(st)
 
         for anasig_idx in range(n_analogsignals):
-            anasig = neo.AnalogSignal(signal=get_rand((100,anasig_idx+2),max=1000)*pq.V,
+            anasig = neo.AnalogSignal(signal=get_rand((100, anasig_idx+2),max=1000)*pq.V,
                                       t_start=0*pq.s,
                                       sampling_rate=(anasig_idx+1)*pq.Hz,
                                       name=f'my_analogsignal_{anasig_idx}')
@@ -69,6 +70,7 @@ def generate_basic_block():
 
     return block
 
+
 def add_spiketrain_groups(block):
     spiketrain_groups = []
     for group_idx in range(n_spiketrains):
@@ -84,6 +86,7 @@ def add_spiketrain_groups(block):
     # attach groups to block
     block.groups.extend(spiketrain_groups)
 
+
 def add_spiketrain_units_channel_indexes(block):
     # Linking pattern:
     # 1 Channel_unit - last channel of analog signal
@@ -123,7 +126,6 @@ if __name__ == '__main__':
     neo_version = Version(neo.__version__)
     print(f'Generating test file for neo version {neo_version} ...', end='')
 
-
     block = generate_basic_block()
 
     # adding spiketrain units to neo block depending on container objects available

nix/generated_file_neo0.10.2.nix

@@ -1 +0,0 @@
-../.git/annex/objects/6j/zJ/MD5E-s1119453--45857426b8e2b205e338cfe73e09762e.2.nix/MD5E-s1119453--45857426b8e2b205e338cfe73e09762e.2.nix

nix/generated_file_neo0.10.2.nix

@@ -0,0 +1 @@
+/annex/objects/MD5E-s1119453--3ee3ce2650ec24c62dc470418e6643dc.2.nix

nix/generated_file_neo0.11.1.nix

@@ -1 +0,0 @@
-../.git/annex/objects/Q3/G8/MD5E-s1119453--3b0f622a24ecf2851ec3f9dde3b415b8.1.nix/MD5E-s1119453--3b0f622a24ecf2851ec3f9dde3b415b8.1.nix

nix/generated_file_neo0.11.1.nix

@@ -0,0 +1 @@
+/annex/objects/MD5E-s1119453--a595956eac98bbc5fc4ff3f9847acd89.1.nix

nix/generated_file_neo0.12.0.nix

@@ -1 +0,0 @@
-../.git/annex/objects/9J/qp/MD5E-s1119453--36f38c60b197d61c8f8724baadec6b6c.0.nix/MD5E-s1119453--36f38c60b197d61c8f8724baadec6b6c.0.nix

nix/generated_file_neo0.12.0.nix

@@ -0,0 +1 @@
+/annex/objects/MD5E-s1119453--fc9ee563dad771cf6563d7a8fa2c2985.0.nix

nix/generated_file_neo0.6.1.nix

@@ -1 +0,0 @@
-../.git/annex/objects/x7/Jj/MD5E-s3047297--378d8210e9d2501af386a7cee3da78ce.1.nix/MD5E-s3047297--378d8210e9d2501af386a7cee3da78ce.1.nix

nix/generated_file_neo0.6.1.nix

@@ -0,0 +1 @@
+/annex/objects/MD5E-s3047297--2ea3c91faee07db72977f7b284216e93.1.nix

nix/generated_file_neo0.7.2.nix

@@ -1 +0,0 @@
-../.git/annex/objects/x5/Wq/MD5E-s1174027--be685e9636e87e956cf6afa2affa8847.2.nix/MD5E-s1174027--be685e9636e87e956cf6afa2affa8847.2.nix

nix/generated_file_neo0.7.2.nix

@@ -0,0 +1 @@
+/annex/objects/MD5E-s1174027--3c01249cd3051af90a6cf94461c8de44.2.nix

nix/generated_file_neo0.8.0.nix

@@ -1 +0,0 @@
-../.git/annex/objects/VX/V5/MD5E-s1174027--c41806652188730b8cf181b1b880669c.0.nix/MD5E-s1174027--c41806652188730b8cf181b1b880669c.0.nix

nix/generated_file_neo0.8.0.nix

@@ -0,0 +1 @@
+/annex/objects/MD5E-s1174027--6494ad5fecfbb330906190ffb2f5e284.0.nix

nix/generated_file_neo0.9.0.nix

@@ -1 +0,0 @@
-../.git/annex/objects/8k/Q6/MD5E-s1119453--ff2521c0c75325a688bfa1b5621e2bdf.0.nix/MD5E-s1119453--ff2521c0c75325a688bfa1b5621e2bdf.0.nix

nix/generated_file_neo0.9.0.nix

@@ -0,0 +1 @@
+/annex/objects/MD5E-s1119453--5087d34e8e021828c1cdfb037531fb3d.0.nix