فهرست منبع

Merge branch 'add/neuroscope' of NeuralEnsemble/ephy_testing_data into master

Samuel Garcia 2 سال پیش
والد
کامیت
153764c9bf
27فایلهای تغییر یافته به همراه48 افزوده شده و 0 حذف شده
  1. 22 0
      neuroscope/dataset_1/README.md
  2. 1 0
      neuroscope/dataset_1/YutaMouse42-151117.eeg
  3. 1 0
      neuroscope/dataset_1/YutaMouse42-151117.spk.1
  4. 1 0
      neuroscope/dataset_1/YutaMouse42-151117.spk.2
  5. 1 0
      neuroscope/dataset_1/YutaMouse42-151117.spk.3
  6. 1 0
      neuroscope/dataset_1/YutaMouse42-151117.spk.4
  7. 1 0
      neuroscope/dataset_1/YutaMouse42-151117.spk.5
  8. 1 0
      neuroscope/dataset_1/YutaMouse42-151117.spk.6
  9. 1 0
      neuroscope/dataset_1/YutaMouse42-151117.spk.7
  10. 1 0
      neuroscope/dataset_1/YutaMouse42-151117.spk.8
  11. 1 0
      neuroscope/dataset_1/YutaMouse42-151117.xml
  12. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.clu.1
  13. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.clu.2
  14. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.clu.3
  15. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.clu.4
  16. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.clu.5
  17. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.clu.6
  18. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.clu.7
  19. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.clu.8
  20. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.res.1
  21. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.res.2
  22. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.res.3
  23. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.res.4
  24. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.res.5
  25. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.res.6
  26. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.res.7
  27. 1 0
      neuroscope/dataset_1/YutaMouse42-15111710.res.8

+ 22 - 0
neuroscope/dataset_1/README.md

@@ -0,0 +1,22 @@
+This dataset is a shortened version of the public `YutaMouse42-151117` dataset provided by the BuzsakiLab
+The public dataset is available [here](https://app.globus.org/file-manager?origin_id=188a6110-96db-11eb-b7a9-f57b2d55370d&origin_path=%2FSenzaiY%2FYutaMouse43%2FYutaMouse43-151117%2F)
+
+The `.xml` format contains general metadata of the recording and can be used to extract
+- the number of channels: `nChannels`
+- the grouping of channels: groups
+- the sampling rate: `samplingRate`
+- the number of bits per recording sample (for dat, eeg and spk files): `nBits`
+- the number of samples per recorded waveform: `nsamples`
+- the amplification factor: `amplification`
+- the voltage range: `voltageRange`
+
+The `.eeg`/`.lfp` format contains continuously sampled data at a 'low' sampling rate and has the dimensions `(totalSamples, nChannels`). The test files here contain 10 total samples.
+
+The `.spk.*` format contains waveforms of spikes across multiple channels. It has the dimensions `(nSpikes,nSamples, nChannels`). The test files here contain 10 spikes each.
+
+The `.res.*` format contains the timestamps of the detected waveforms . It is an ASCII file with one timestamp per spike.
+
+The `.clu.*` format contains the assignment of spike to clusters . It is an ASCII file with cluster id per spike.
+
+
+For an overview of the data layout for different formats, see also http://neurosuite.sourceforge.net/formats.html

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-151117.eeg

@@ -0,0 +1 @@
+../../.git/annex/objects/G2/M7/MD5E-s1600--3a9985abaf1c7a3403dc4757fac44d63.eeg/MD5E-s1600--3a9985abaf1c7a3403dc4757fac44d63.eeg

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-151117.spk.1

@@ -0,0 +1 @@
+../../.git/annex/objects/8w/jX/MD5E-s5120--77b43205607624d5cbd177d07a50d1af.spk.1/MD5E-s5120--77b43205607624d5cbd177d07a50d1af.spk.1

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-151117.spk.2

@@ -0,0 +1 @@
+../../.git/annex/objects/wp/Wv/MD5E-s5120--f153dd0fb76ca26a20fb1156133924c7.spk.2/MD5E-s5120--f153dd0fb76ca26a20fb1156133924c7.spk.2

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-151117.spk.3

@@ -0,0 +1 @@
+../../.git/annex/objects/w6/05/MD5E-s5120--b0afb9c636947aa206206675297839e2.spk.3/MD5E-s5120--b0afb9c636947aa206206675297839e2.spk.3

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-151117.spk.4

@@ -0,0 +1 @@
+../../.git/annex/objects/95/Xw/MD5E-s5120--26147199835fc32bef07a5a18bfca971.spk.4/MD5E-s5120--26147199835fc32bef07a5a18bfca971.spk.4

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-151117.spk.5

@@ -0,0 +1 @@
+../../.git/annex/objects/VM/xW/MD5E-s5120--f7b955ac53fb4c256e4ca5c17396dba5.spk.5/MD5E-s5120--f7b955ac53fb4c256e4ca5c17396dba5.spk.5

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-151117.spk.6

@@ -0,0 +1 @@
+../../.git/annex/objects/1k/xM/MD5E-s5120--34e847189672136d7f53cc0bc2f7e8ac.spk.6/MD5E-s5120--34e847189672136d7f53cc0bc2f7e8ac.spk.6

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-151117.spk.7

@@ -0,0 +1 @@
+../../.git/annex/objects/71/PP/MD5E-s5120--fed66b2eb56c57b780ca5b7ed8aeb391.spk.7/MD5E-s5120--fed66b2eb56c57b780ca5b7ed8aeb391.spk.7

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-151117.spk.8

@@ -0,0 +1 @@
+../../.git/annex/objects/8J/jX/MD5E-s5120--7c5fafc21d507a9d567330efcb6faa6c.spk.8/MD5E-s5120--7c5fafc21d507a9d567330efcb6faa6c.spk.8

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-151117.xml

@@ -0,0 +1 @@
+../../.git/annex/objects/Xg/gP/MD5E-s45185--0193ade39b945ab9de8bf8ce8c7f94dc.xml/MD5E-s45185--0193ade39b945ab9de8bf8ce8c7f94dc.xml

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.clu.1

@@ -0,0 +1 @@
+../../.git/annex/objects/39/j3/MD5E-s23--4136c99559affb73b3bdc5eeed6154ae.clu.1/MD5E-s23--4136c99559affb73b3bdc5eeed6154ae.clu.1

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.clu.2

@@ -0,0 +1 @@
+../../.git/annex/objects/xk/Pq/MD5E-s23--8ab4c48b9a03237dfef0698b5ad0da74.clu.2/MD5E-s23--8ab4c48b9a03237dfef0698b5ad0da74.clu.2

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.clu.3

@@ -0,0 +1 @@
+../../.git/annex/objects/gf/28/MD5E-s30--4053e67013ed5f28d25ca30560bb4e0c.clu.3/MD5E-s30--4053e67013ed5f28d25ca30560bb4e0c.clu.3

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.clu.4

@@ -0,0 +1 @@
+../../.git/annex/objects/XQ/1w/MD5E-s32--cbdfd8b1ebe5433b000e74458c3aa691.clu.4/MD5E-s32--cbdfd8b1ebe5433b000e74458c3aa691.clu.4

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.clu.5

@@ -0,0 +1 @@
+../../.git/annex/objects/1m/m6/MD5E-s28--d767f6fcaed26420a9be1e908146c04d.clu.5/MD5E-s28--d767f6fcaed26420a9be1e908146c04d.clu.5

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.clu.6

@@ -0,0 +1 @@
+../../.git/annex/objects/z7/pz/MD5E-s29--624a90308f372942825f88daeab2a4e3.clu.6/MD5E-s29--624a90308f372942825f88daeab2a4e3.clu.6

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.clu.7

@@ -0,0 +1 @@
+../../.git/annex/objects/83/p5/MD5E-s37--b279af5147e6680e51eb5fe76bbe0ac0.clu.7/MD5E-s37--b279af5147e6680e51eb5fe76bbe0ac0.clu.7

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.clu.8

@@ -0,0 +1 @@
+../../.git/annex/objects/0w/ZM/MD5E-s30--bf5d74fc766293e229f7450c714d5185.clu.8/MD5E-s30--bf5d74fc766293e229f7450c714d5185.clu.8

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.res.1

@@ -0,0 +1 @@
+../../.git/annex/objects/kp/6p/MD5E-s50--577dbf7973cab364ab68495d142df5a7.res.1/MD5E-s50--577dbf7973cab364ab68495d142df5a7.res.1

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.res.2

@@ -0,0 +1 @@
+../../.git/annex/objects/5g/mK/MD5E-s47--9684ef3a8cacaa4e8b73379931af5ce1.res.2/MD5E-s47--9684ef3a8cacaa4e8b73379931af5ce1.res.2

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.res.3

@@ -0,0 +1 @@
+../../.git/annex/objects/wZ/zM/MD5E-s44--cad71fade1ade4bfb21d2ada9e10ed56.res.3/MD5E-s44--cad71fade1ade4bfb21d2ada9e10ed56.res.3

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.res.4

@@ -0,0 +1 @@
+../../.git/annex/objects/xM/0V/MD5E-s49--fa0b9551a9bdd7120a848262a9e11400.res.4/MD5E-s49--fa0b9551a9bdd7120a848262a9e11400.res.4

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.res.5

@@ -0,0 +1 @@
+../../.git/annex/objects/2w/8W/MD5E-s46--ab49723092b4a66d7c8af84594931a83.res.5/MD5E-s46--ab49723092b4a66d7c8af84594931a83.res.5

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.res.6

@@ -0,0 +1 @@
+../../.git/annex/objects/97/Wz/MD5E-s47--9dbcf925a83c20294e167df295990b49.res.6/MD5E-s47--9dbcf925a83c20294e167df295990b49.res.6

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.res.7

@@ -0,0 +1 @@
+../../.git/annex/objects/fj/pM/MD5E-s45--1e88f8ca5749c3f016faaa658d09eb31.res.7/MD5E-s45--1e88f8ca5749c3f016faaa658d09eb31.res.7

+ 1 - 0
neuroscope/dataset_1/YutaMouse42-15111710.res.8

@@ -0,0 +1 @@
+../../.git/annex/objects/18/45/MD5E-s45--be83c076031c949c548361e151289f19.res.8/MD5E-s45--be83c076031c949c548361e151289f19.res.8