We use cookies to ensure you get the best experience on our website
Home Explore Help News
Register Sign In
JiriVanek
/
DataConversionToNIX
1
0
Fork 0
Files Issues 0 Pull Requests 0 Wiki
Branch: master
Branches Tags
DataConversi...
/
readrawnix.html

readrawnix.html 4.6 KB
Permalink History Download

1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071 
  1. <!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN">
    2. 

  2. <html><head><title>Python: module readrawnix</title>
    3. 

  3. <meta http-equiv="Content-Type" content="text/html; charset=utf-8">
    4. 

  4. </head><body bgcolor="#f0f0f8">
    5. 

  5. 

  6. <table width="100%" cellspacing=0 cellpadding=2 border=0 summary="heading">
    7. 

  7. <tr bgcolor="#7799ee">
    8. 

  8. <td valign=bottom>&nbsp;<br>
    9. 

  9. <font color="#ffffff" face="helvetica, arial">&nbsp;<br><big><big><strong>readrawnix</strong></big></big></font></td
    10. 

  10. ><td align=right valign=bottom
    11. 

  11. ><font color="#ffffff" face="helvetica, arial"><a href=".">index</a><br><a href="file:/Users/achilleas/code/pilsen-workshop/DataConversionToNIX/readrawnix.py">/Users/achilleas/code/pilsen-workshop/DataConversionToNIX/readrawnix.py</a></font></td></tr></table>
    12. 

  12.     <p><tt>readrawnix.py<br>
    13. 

  13. &nbsp;<br>
    14. 

  14. Usage:<br>
    15. 

  15. &nbsp;&nbsp;python&nbsp;readrawnix.py&nbsp;&lt;nixfile&gt;<br>
    16. 

  16. &nbsp;<br>
    17. 

  17. Arguments:<br>
    18. 

  18. &nbsp;&nbsp;nixfile&nbsp;&nbsp;&nbsp;Path&nbsp;to&nbsp;the&nbsp;NIX&nbsp;file&nbsp;to&nbsp;read.<br>
    19. 

  19. &nbsp;<br>
    20. 

  20. &nbsp;<br>
    21. 

  21. (Requires&nbsp;Python&nbsp;3)<br>
    22. 

  22. &nbsp;<br>
    23. 

  23. Command&nbsp;line&nbsp;script&nbsp;for&nbsp;reading&nbsp;NIX&nbsp;files&nbsp;into&nbsp;an&nbsp;MNE&nbsp;structure&nbsp;(mne-python).<br>
    24. 

  24. NIX&nbsp;file&nbsp;should&nbsp;have&nbsp;been&nbsp;created&nbsp;using&nbsp;the&nbsp;mnetonix.py&nbsp;script/module.&nbsp;&nbsp;This<br>
    25. 

  25. reader&nbsp;expects&nbsp;certain&nbsp;objects&nbsp;relationships&nbsp;and&nbsp;names&nbsp;to&nbsp;exist&nbsp;in&nbsp;order&nbsp;to<br>
    26. 

  26. load&nbsp;all&nbsp;data&nbsp;and&nbsp;metadata&nbsp;successfully.&nbsp;&nbsp;Refer&nbsp;to&nbsp;the&nbsp;"NIX&nbsp;Format&nbsp;Layout"&nbsp;in<br>
    27. 

  27. the&nbsp;mnetonix.py&nbsp;module&nbsp;for&nbsp;details.<br>
    28. 

  28. &nbsp;<br>
    29. 

  29. To&nbsp;include&nbsp;in&nbsp;a&nbsp;script,&nbsp;call&nbsp;the&nbsp;'<a href="#-import_nix">import_nix</a>()'&nbsp;and&nbsp;provide&nbsp;a&nbsp;NIX&nbsp;filename.</tt></p>
    30. 

  30. <p>
    31. 

  31. <table width="100%" cellspacing=0 cellpadding=2 border=0 summary="section">
    32. 

  32. <tr bgcolor="#aa55cc">
    33. 

  33. <td colspan=3 valign=bottom>&nbsp;<br>
    34. 

  34. <font color="#ffffff" face="helvetica, arial"><big><strong>Modules</strong></big></font></td></tr>
    35. 

  35.     
    36. 

  36. <tr><td bgcolor="#aa55cc"><tt>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</tt></td><td>&nbsp;</td>
    37. 

  37. <td width="100%"><table width="100%" summary="list"><tr><td width="25%" valign=top><a href="mne.html">mne</a><br>
    38. 

  38. <a href="nixio.html">nixio</a><br>
    39. 

  39. </td><td width="25%" valign=top><a href="numpy.html">numpy</a><br>
    40. 

  40. <a href="os.html">os</a><br>
    41. 

  41. </td><td width="25%" valign=top><a href="sys.html">sys</a><br>
    42. 

  42. </td><td width="25%" valign=top></td></tr></table></td></tr></table><p>
    43. 

  43. <table width="100%" cellspacing=0 cellpadding=2 border=0 summary="section">
    44. 

  44. <tr bgcolor="#eeaa77">
    45. 

  45. <td colspan=3 valign=bottom>&nbsp;<br>
    46. 

  46. <font color="#ffffff" face="helvetica, arial"><big><strong>Functions</strong></big></font></td></tr>
    47. 

  47.     
    48. 

  48. <tr><td bgcolor="#eeaa77"><tt>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</tt></td><td>&nbsp;</td>
    49. 

  49. <td width="100%"><dl><dt><a name="-convert_prop_type"><strong>convert_prop_type</strong></a>(prop)</dt></dl>
    50. 

  50.  <dl><dt><a name="-create_mne_annotations"><strong>create_mne_annotations</strong></a>(mtags)</dt></dl>
    51. 

  51.  <dl><dt><a name="-import_nix"><strong>import_nix</strong></a>(nixfilename)</dt><dd><tt>Import&nbsp;a&nbsp;NIX&nbsp;file&nbsp;(generated&nbsp;with&nbsp;mnetonix.py)&nbsp;into&nbsp;an&nbsp;MNE&nbsp;Raw&nbsp;structure.<br>
    52. 

  52. &nbsp;<br>
    53. 

  53. :param&nbsp;nixfilename:&nbsp;Path&nbsp;to&nbsp;the&nbsp;NIX&nbsp;file&nbsp;to&nbsp;be&nbsp;loaded.<br>
    54. 

  54. :rtype:&nbsp;mne.io.RawArray</tt></dd></dl>
    55. 

  55.  <dl><dt><a name="-main"><strong>main</strong></a>()</dt></dl>
    56. 

  56.  <dl><dt><a name="-md_to_dict"><strong>md_to_dict</strong></a>(section)</dt></dl>
    57. 

  57.  <dl><dt><a name="-merge_data_arrays"><strong>merge_data_arrays</strong></a>(arrays)</dt></dl>
    58. 

  58. </td></tr></table><p>
    59. 

  59. <table width="100%" cellspacing=0 cellpadding=2 border=0 summary="section">
    60. 

  60. <tr bgcolor="#55aa55">
    61. 

  61. <td colspan=3 valign=bottom>&nbsp;<br>
    62. 

  62. <font color="#ffffff" face="helvetica, arial"><big><strong>Data</strong></big></font></td></tr>
    63. 

  63.     
    64. 

  64. <tr><td bgcolor="#55aa55"><tt>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</tt></td><td>&nbsp;</td>
    65. 

  65. <td width="100%"><strong>DATA_BLOCK_NAME</strong> = 'EEG Data Block'<br>
    66. 

  66. <strong>DATA_BLOCK_TYPE</strong> = 'Recording'<br>
    67. 

  67. <strong>RAW_DATA_GROUP_NAME</strong> = 'Raw Data Group'<br>
    68. 

  68. <strong>RAW_DATA_GROUP_TYPE</strong> = 'EEG Channels'<br>
    69. 

  69. <strong>RAW_DATA_TYPE</strong> = 'Raw Data'<br>
    70. 

  70. <strong>typemap</strong> = {'bool': &lt;class 'bool'&gt;, 'float': &lt;class 'float'&gt;, 'int': &lt;class 'int'&gt;, 'list': &lt;class 'list'&gt;, 'numpy.float64': &lt;class 'numpy.float64'&gt;, 'numpy.ndarray': &lt;built-in function array&gt;, 'str': &lt;class 'str'&gt;, 'tuple': &lt;class 'tuple'&gt;}</td></tr></table>
    71. 

  71. </body></html>
    72.